BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017037
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein C...   207   7e-52
ref|XP_002313066.1| predicted protein [Populus trichocarpa] gi|2...   206   1e-51
ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein C...   204   8e-51
ref|XP_002519098.1| conserved hypothetical protein [Ricinus comm...   197   7e-49
ref|NP_564544.1| cytochrome c biogenesis protein CCS1 [Arabidops...   196   1e-48

>ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic
           [Vitis vinifera] gi|297741415|emb|CBI32546.3| unnamed
           protein product [Vitis vinifera]
          Length = 557

 Score =  207 bits (527), Expect = 7e-52
 Identities = 99/115 (86%), Positives = 109/115 (94%)
 Frame = +1

Query: 1   LIMAGGTYSASGAFRGSVTVPQGLNFVMGDVLQPNGFLSTPTQAFNTEVHVNRFYMDYYD 180
           LIM GGT SA+G+FRGSVTVPQGLNFVMGDVL P+GFLSTPT+AF+TEVHVNRFYMDYYD
Sbjct: 275 LIMVGGTLSATGSFRGSVTVPQGLNFVMGDVLSPSGFLSTPTKAFDTEVHVNRFYMDYYD 334

Query: 181 SGEVSQFHTDLSLFDLDGKEVMRKTISVNDPLRYNGITIYQTDWSISALQVLKDN 345
           SGEV QFHTDLSLFDL+GKEVMRKTISVNDPLR++GITIYQTDWS SALQ+ KD+
Sbjct: 335 SGEVLQFHTDLSLFDLNGKEVMRKTISVNDPLRFDGITIYQTDWSFSALQIRKDD 389


>ref|XP_002313066.1| predicted protein [Populus trichocarpa] gi|222849474|gb|EEE87021.1|
           predicted protein [Populus trichocarpa]
          Length = 432

 Score =  206 bits (525), Expect = 1e-51
 Identities = 99/115 (86%), Positives = 108/115 (93%)
 Frame = +1

Query: 1   LIMAGGTYSASGAFRGSVTVPQGLNFVMGDVLQPNGFLSTPTQAFNTEVHVNRFYMDYYD 180
           LIMAG T SA+G+FRGSVTVPQGLNFV+GDVL P+GFLSTPT+AFNTEVHVNRFYMDYYD
Sbjct: 150 LIMAGATLSATGSFRGSVTVPQGLNFVVGDVLGPSGFLSTPTEAFNTEVHVNRFYMDYYD 209

Query: 181 SGEVSQFHTDLSLFDLDGKEVMRKTISVNDPLRYNGITIYQTDWSISALQVLKDN 345
            G+V QFHTDLSLFDL+GKEVMRKTISVNDPLRY GIT+YQTDWSISALQV KD+
Sbjct: 210 GGDVKQFHTDLSLFDLNGKEVMRKTISVNDPLRYGGITMYQTDWSISALQVRKDD 264


>ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like
           [Glycine max]
          Length = 563

 Score =  204 bits (518), Expect = 8e-51
 Identities = 98/115 (85%), Positives = 108/115 (93%)
 Frame = +1

Query: 1   LIMAGGTYSASGAFRGSVTVPQGLNFVMGDVLQPNGFLSTPTQAFNTEVHVNRFYMDYYD 180
           LIMAGGT SA+G+FRGSVTVPQGLNFV+GDVL P GFLS+PT AFNTE+HVN+F MDYY+
Sbjct: 281 LIMAGGTLSATGSFRGSVTVPQGLNFVVGDVLAPFGFLSSPTDAFNTEIHVNKFSMDYYE 340

Query: 181 SGEVSQFHTDLSLFDLDGKEVMRKTISVNDPLRYNGITIYQTDWSISALQVLKDN 345
           SGEVSQFHTDLSL ++DGKEVMRKTISVNDPLRY GITIYQTDWSISALQ+LKDN
Sbjct: 341 SGEVSQFHTDLSLRNMDGKEVMRKTISVNDPLRYGGITIYQTDWSISALQILKDN 395


>ref|XP_002519098.1| conserved hypothetical protein [Ricinus communis]
           gi|223541761|gb|EEF43309.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 556

 Score =  197 bits (501), Expect = 7e-49
 Identities = 92/115 (80%), Positives = 108/115 (93%)
 Frame = +1

Query: 1   LIMAGGTYSASGAFRGSVTVPQGLNFVMGDVLQPNGFLSTPTQAFNTEVHVNRFYMDYYD 180
           LIMAG T +A+G+FRGSVTVPQGLNFV+GDVL P+GFLSTPT+AFNTEVHVN+FYMDYYD
Sbjct: 273 LIMAGATLTATGSFRGSVTVPQGLNFVVGDVLGPSGFLSTPTEAFNTEVHVNKFYMDYYD 332

Query: 181 SGEVSQFHTDLSLFDLDGKEVMRKTISVNDPLRYNGITIYQTDWSISALQVLKDN 345
           SGEVSQF++DLSL+D+DGKEV+RKTISVN+PLRY G TIYQTDWS SALQ+ K++
Sbjct: 333 SGEVSQFYSDLSLYDIDGKEVLRKTISVNNPLRYGGFTIYQTDWSFSALQIRKND 387


>ref|NP_564544.1| cytochrome c biogenesis protein CCS1 [Arabidopsis thaliana]
           gi|75215676|sp|Q9XIA4.1|CCS1_ARATH RecName:
           Full=Cytochrome c biogenesis protein CCS1,
           chloroplastic; AltName: Full=C-type cytochrome synthesis
           protein 1; Flags: Precursor
           gi|5430762|gb|AAD43162.1|AC007504_17 Similar to CCS1
           [Arabidopsis thaliana] gi|26449682|dbj|BAC41965.1|
           unknown protein [Arabidopsis thaliana]
           gi|332194302|gb|AEE32423.1| cytochrome c biogenesis
           protein CCS1 [Arabidopsis thaliana]
          Length = 547

 Score =  196 bits (499), Expect = 1e-48
 Identities = 95/114 (83%), Positives = 102/114 (89%)
 Frame = +1

Query: 1   LIMAGGTYSASGAFRGSVTVPQGLNFVMGDVLQPNGFLSTPTQAFNTEVHVNRFYMDYYD 180
           LIM GGT SA+G+FRGSVTVPQGLNFVMGDVL P GF S PT AFNTEVHVNRF MDYYD
Sbjct: 267 LIMVGGTLSATGSFRGSVTVPQGLNFVMGDVLAPIGFFSIPTDAFNTEVHVNRFTMDYYD 326

Query: 181 SGEVSQFHTDLSLFDLDGKEVMRKTISVNDPLRYNGITIYQTDWSISALQVLKD 342
           SGEVSQFH+DLSL DL+GKEV+RKTISVNDPLRY G+T+YQTDWS SALQV KD
Sbjct: 327 SGEVSQFHSDLSLRDLNGKEVLRKTISVNDPLRYGGVTVYQTDWSFSALQVTKD 380