BLASTX nr result
ID: Coptis24_contig00017037
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00017037 (346 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein C... 207 7e-52 ref|XP_002313066.1| predicted protein [Populus trichocarpa] gi|2... 206 1e-51 ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein C... 204 8e-51 ref|XP_002519098.1| conserved hypothetical protein [Ricinus comm... 197 7e-49 ref|NP_564544.1| cytochrome c biogenesis protein CCS1 [Arabidops... 196 1e-48 >ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic [Vitis vinifera] gi|297741415|emb|CBI32546.3| unnamed protein product [Vitis vinifera] Length = 557 Score = 207 bits (527), Expect = 7e-52 Identities = 99/115 (86%), Positives = 109/115 (94%) Frame = +1 Query: 1 LIMAGGTYSASGAFRGSVTVPQGLNFVMGDVLQPNGFLSTPTQAFNTEVHVNRFYMDYYD 180 LIM GGT SA+G+FRGSVTVPQGLNFVMGDVL P+GFLSTPT+AF+TEVHVNRFYMDYYD Sbjct: 275 LIMVGGTLSATGSFRGSVTVPQGLNFVMGDVLSPSGFLSTPTKAFDTEVHVNRFYMDYYD 334 Query: 181 SGEVSQFHTDLSLFDLDGKEVMRKTISVNDPLRYNGITIYQTDWSISALQVLKDN 345 SGEV QFHTDLSLFDL+GKEVMRKTISVNDPLR++GITIYQTDWS SALQ+ KD+ Sbjct: 335 SGEVLQFHTDLSLFDLNGKEVMRKTISVNDPLRFDGITIYQTDWSFSALQIRKDD 389 >ref|XP_002313066.1| predicted protein [Populus trichocarpa] gi|222849474|gb|EEE87021.1| predicted protein [Populus trichocarpa] Length = 432 Score = 206 bits (525), Expect = 1e-51 Identities = 99/115 (86%), Positives = 108/115 (93%) Frame = +1 Query: 1 LIMAGGTYSASGAFRGSVTVPQGLNFVMGDVLQPNGFLSTPTQAFNTEVHVNRFYMDYYD 180 LIMAG T SA+G+FRGSVTVPQGLNFV+GDVL P+GFLSTPT+AFNTEVHVNRFYMDYYD Sbjct: 150 LIMAGATLSATGSFRGSVTVPQGLNFVVGDVLGPSGFLSTPTEAFNTEVHVNRFYMDYYD 209 Query: 181 SGEVSQFHTDLSLFDLDGKEVMRKTISVNDPLRYNGITIYQTDWSISALQVLKDN 345 G+V QFHTDLSLFDL+GKEVMRKTISVNDPLRY GIT+YQTDWSISALQV KD+ Sbjct: 210 GGDVKQFHTDLSLFDLNGKEVMRKTISVNDPLRYGGITMYQTDWSISALQVRKDD 264 >ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like [Glycine max] Length = 563 Score = 204 bits (518), Expect = 8e-51 Identities = 98/115 (85%), Positives = 108/115 (93%) Frame = +1 Query: 1 LIMAGGTYSASGAFRGSVTVPQGLNFVMGDVLQPNGFLSTPTQAFNTEVHVNRFYMDYYD 180 LIMAGGT SA+G+FRGSVTVPQGLNFV+GDVL P GFLS+PT AFNTE+HVN+F MDYY+ Sbjct: 281 LIMAGGTLSATGSFRGSVTVPQGLNFVVGDVLAPFGFLSSPTDAFNTEIHVNKFSMDYYE 340 Query: 181 SGEVSQFHTDLSLFDLDGKEVMRKTISVNDPLRYNGITIYQTDWSISALQVLKDN 345 SGEVSQFHTDLSL ++DGKEVMRKTISVNDPLRY GITIYQTDWSISALQ+LKDN Sbjct: 341 SGEVSQFHTDLSLRNMDGKEVMRKTISVNDPLRYGGITIYQTDWSISALQILKDN 395 >ref|XP_002519098.1| conserved hypothetical protein [Ricinus communis] gi|223541761|gb|EEF43309.1| conserved hypothetical protein [Ricinus communis] Length = 556 Score = 197 bits (501), Expect = 7e-49 Identities = 92/115 (80%), Positives = 108/115 (93%) Frame = +1 Query: 1 LIMAGGTYSASGAFRGSVTVPQGLNFVMGDVLQPNGFLSTPTQAFNTEVHVNRFYMDYYD 180 LIMAG T +A+G+FRGSVTVPQGLNFV+GDVL P+GFLSTPT+AFNTEVHVN+FYMDYYD Sbjct: 273 LIMAGATLTATGSFRGSVTVPQGLNFVVGDVLGPSGFLSTPTEAFNTEVHVNKFYMDYYD 332 Query: 181 SGEVSQFHTDLSLFDLDGKEVMRKTISVNDPLRYNGITIYQTDWSISALQVLKDN 345 SGEVSQF++DLSL+D+DGKEV+RKTISVN+PLRY G TIYQTDWS SALQ+ K++ Sbjct: 333 SGEVSQFYSDLSLYDIDGKEVLRKTISVNNPLRYGGFTIYQTDWSFSALQIRKND 387 >ref|NP_564544.1| cytochrome c biogenesis protein CCS1 [Arabidopsis thaliana] gi|75215676|sp|Q9XIA4.1|CCS1_ARATH RecName: Full=Cytochrome c biogenesis protein CCS1, chloroplastic; AltName: Full=C-type cytochrome synthesis protein 1; Flags: Precursor gi|5430762|gb|AAD43162.1|AC007504_17 Similar to CCS1 [Arabidopsis thaliana] gi|26449682|dbj|BAC41965.1| unknown protein [Arabidopsis thaliana] gi|332194302|gb|AEE32423.1| cytochrome c biogenesis protein CCS1 [Arabidopsis thaliana] Length = 547 Score = 196 bits (499), Expect = 1e-48 Identities = 95/114 (83%), Positives = 102/114 (89%) Frame = +1 Query: 1 LIMAGGTYSASGAFRGSVTVPQGLNFVMGDVLQPNGFLSTPTQAFNTEVHVNRFYMDYYD 180 LIM GGT SA+G+FRGSVTVPQGLNFVMGDVL P GF S PT AFNTEVHVNRF MDYYD Sbjct: 267 LIMVGGTLSATGSFRGSVTVPQGLNFVMGDVLAPIGFFSIPTDAFNTEVHVNRFTMDYYD 326 Query: 181 SGEVSQFHTDLSLFDLDGKEVMRKTISVNDPLRYNGITIYQTDWSISALQVLKD 342 SGEVSQFH+DLSL DL+GKEV+RKTISVNDPLRY G+T+YQTDWS SALQV KD Sbjct: 327 SGEVSQFHSDLSLRDLNGKEVLRKTISVNDPLRYGGVTVYQTDWSFSALQVTKD 380