BLASTX nr result
ID: Coptis24_contig00017036
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00017036 (430 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN69725.1| hypothetical protein VITISV_009152 [Vitis vinifera] 93 2e-17 ref|XP_002283177.1| PREDICTED: translation initiation factor eIF... 82 5e-14 ref|XP_002275165.2| PREDICTED: translation initiation factor eIF... 80 2e-13 ref|XP_004138224.1| PREDICTED: translation initiation factor eIF... 76 3e-12 ref|XP_002318563.1| predicted protein [Populus trichocarpa] gi|2... 74 1e-11 >emb|CAN69725.1| hypothetical protein VITISV_009152 [Vitis vinifera] Length = 841 Score = 93.2 bits (230), Expect = 2e-17 Identities = 65/137 (47%), Positives = 77/137 (56%), Gaps = 13/137 (9%) Frame = -1 Query: 382 LSHLKTLTHTQQFP-QMDTRRVSRTVIDPKIRQVGFITP-------TSGPP----PPLDR 239 +S LKTLTH + P MD RR +R VIDPK+RQVGF P SGPP PP+ Sbjct: 50 ISTLKTLTHIHETPLHMDPRRGARVVIDPKVRQVGFFAPGASPGRTQSGPPESSSPPV-- 107 Query: 238 TQSGPASNSLPPVTIPPRRHASDNLTSV-PVNVPMSPLRKISINENMPVGSYESSQHFLG 62 + P NSL PV IPP RHASDNL S P P PLR+ + +PVGSY S+ F G Sbjct: 108 ADNSPTGNSLSPVMIPPPRHASDNLLSARPALYP--PLRR--PGDTIPVGSYNPSEFFHG 163 Query: 61 ASEISTESMINKFYDDD 11 S T S +K D + Sbjct: 164 TS--PTASFYSKVGDGE 178 >ref|XP_002283177.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like [Vitis vinifera] Length = 650 Score = 82.0 bits (201), Expect = 5e-14 Identities = 57/121 (47%), Positives = 67/121 (55%), Gaps = 12/121 (9%) Frame = -1 Query: 337 MDTRRVSRTVIDPKIRQVGFITP-------TSGPP----PPLDRTQSGPASNSLPPVTIP 191 MD RR +R VIDPK+RQVGF P SGPP PP+ + P NSL PV IP Sbjct: 1 MDPRRGARVVIDPKVRQVGFFAPGASPGRTQSGPPESSSPPV--ADNSPTGNSLSPVMIP 58 Query: 190 PRRHASDNLTSV-PVNVPMSPLRKISINENMPVGSYESSQHFLGASEISTESMINKFYDD 14 P RHASDNL S P P PLR+ + +PVGSY S+ F G S T S +K D Sbjct: 59 PPRHASDNLLSARPALYP--PLRR--PGDTIPVGSYNPSEFFHGTS--PTASFYSKVGDG 112 Query: 13 D 11 + Sbjct: 113 E 113 >ref|XP_002275165.2| PREDICTED: translation initiation factor eIF-2B subunit delta-like [Vitis vinifera] gi|297734159|emb|CBI15406.3| unnamed protein product [Vitis vinifera] Length = 649 Score = 80.1 bits (196), Expect = 2e-13 Identities = 52/112 (46%), Positives = 65/112 (58%), Gaps = 15/112 (13%) Frame = -1 Query: 337 MDTRRVSRTVIDPKIRQVGFITP-------TSGP-----PPPLDRTQSGPASNSLPPVTI 194 M+ RR SR IDPK+RQVGF P SGP PP+ + P NSL PV I Sbjct: 1 MEARRTSRIPIDPKVRQVGFFAPGALRDRSQSGPLGFSSSPPV--SNISPTGNSLSPVMI 58 Query: 193 PPRRHASDN-LTSVPVNVPM--SPLRKISINENMPVGSYESSQHFLGASEIS 47 PP RHASDN + S P+ VP+ S LR ++ + M VGSY++S+ LG S S Sbjct: 59 PPPRHASDNFVLSRPLAVPVSDSTLRPPAVEDRMAVGSYDASELLLGTSASS 110 >ref|XP_004138224.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like [Cucumis sativus] gi|449477110|ref|XP_004154932.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like [Cucumis sativus] Length = 651 Score = 75.9 bits (185), Expect = 3e-12 Identities = 50/123 (40%), Positives = 71/123 (57%), Gaps = 11/123 (8%) Frame = -1 Query: 337 MDTRRVSRTVIDPKIRQVGFIT---------PTSGPPPPLDRTQS-GPASNSLPPVTIPP 188 MD RR SR +++PK+RQVGF T SGPP L QS P +NSL PV IPP Sbjct: 1 MDARRGSR-IVNPKVRQVGFFTLDAPNSPDRSLSGPPNCLPSQQSLSPPTNSLSPVMIPP 59 Query: 187 RRHASDNLTSVPVNVPM-SPLRKISINENMPVGSYESSQHFLGASEISTESMINKFYDDD 11 RH SDNL S +P+ +P + + +PVGSY S+ L S +++ S ++ D++ Sbjct: 60 PRHLSDNLASRSAVLPVPAPANWRNSTDQIPVGSYNPSETLLATSPMASPS--SRTGDEE 117 Query: 10 VDV 2 +D+ Sbjct: 118 LDM 120 >ref|XP_002318563.1| predicted protein [Populus trichocarpa] gi|222859236|gb|EEE96783.1| predicted protein [Populus trichocarpa] Length = 349 Score = 73.9 bits (180), Expect = 1e-11 Identities = 50/111 (45%), Positives = 60/111 (54%), Gaps = 17/111 (15%) Frame = -1 Query: 337 MDTRRVSRTVIDPKIRQVGFITPTSGPPPPLDRTQS------------GPASNSLPPVTI 194 MD RR + TV P++RQVGF TP + P P RTQS PASNSL PV I Sbjct: 1 MDARRATTTV--PRVRQVGFFTPNAPPAQP-SRTQSFPRDSSSPPLSNSPASNSLSPVMI 57 Query: 193 PPRRHASDNL-----TSVPVNVPMSPLRKISINENMPVGSYESSQHFLGAS 56 PP RH SDNL + +PV P + R I + VGSY S+ LG+S Sbjct: 58 PPPRHLSDNLVHRATSPLPVPEPPAFRRPIRSHHVAVVGSYNPSESLLGSS 108