BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017036
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69725.1| hypothetical protein VITISV_009152 [Vitis vinifera]    93   2e-17
ref|XP_002283177.1| PREDICTED: translation initiation factor eIF...    82   5e-14
ref|XP_002275165.2| PREDICTED: translation initiation factor eIF...    80   2e-13
ref|XP_004138224.1| PREDICTED: translation initiation factor eIF...    76   3e-12
ref|XP_002318563.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11

>emb|CAN69725.1| hypothetical protein VITISV_009152 [Vitis vinifera]
          Length = 841

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 65/137 (47%), Positives = 77/137 (56%), Gaps = 13/137 (9%)
 Frame = -1

Query: 382 LSHLKTLTHTQQFP-QMDTRRVSRTVIDPKIRQVGFITP-------TSGPP----PPLDR 239
           +S LKTLTH  + P  MD RR +R VIDPK+RQVGF  P        SGPP    PP+  
Sbjct: 50  ISTLKTLTHIHETPLHMDPRRGARVVIDPKVRQVGFFAPGASPGRTQSGPPESSSPPV-- 107

Query: 238 TQSGPASNSLPPVTIPPRRHASDNLTSV-PVNVPMSPLRKISINENMPVGSYESSQHFLG 62
             + P  NSL PV IPP RHASDNL S  P   P  PLR+    + +PVGSY  S+ F G
Sbjct: 108 ADNSPTGNSLSPVMIPPPRHASDNLLSARPALYP--PLRR--PGDTIPVGSYNPSEFFHG 163

Query: 61  ASEISTESMINKFYDDD 11
            S   T S  +K  D +
Sbjct: 164 TS--PTASFYSKVGDGE 178


>ref|XP_002283177.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
           [Vitis vinifera]
          Length = 650

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 57/121 (47%), Positives = 67/121 (55%), Gaps = 12/121 (9%)
 Frame = -1

Query: 337 MDTRRVSRTVIDPKIRQVGFITP-------TSGPP----PPLDRTQSGPASNSLPPVTIP 191
           MD RR +R VIDPK+RQVGF  P        SGPP    PP+    + P  NSL PV IP
Sbjct: 1   MDPRRGARVVIDPKVRQVGFFAPGASPGRTQSGPPESSSPPV--ADNSPTGNSLSPVMIP 58

Query: 190 PRRHASDNLTSV-PVNVPMSPLRKISINENMPVGSYESSQHFLGASEISTESMINKFYDD 14
           P RHASDNL S  P   P  PLR+    + +PVGSY  S+ F G S   T S  +K  D 
Sbjct: 59  PPRHASDNLLSARPALYP--PLRR--PGDTIPVGSYNPSEFFHGTS--PTASFYSKVGDG 112

Query: 13  D 11
           +
Sbjct: 113 E 113


>ref|XP_002275165.2| PREDICTED: translation initiation factor eIF-2B subunit delta-like
           [Vitis vinifera] gi|297734159|emb|CBI15406.3| unnamed
           protein product [Vitis vinifera]
          Length = 649

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 52/112 (46%), Positives = 65/112 (58%), Gaps = 15/112 (13%)
 Frame = -1

Query: 337 MDTRRVSRTVIDPKIRQVGFITP-------TSGP-----PPPLDRTQSGPASNSLPPVTI 194
           M+ RR SR  IDPK+RQVGF  P        SGP      PP+  +   P  NSL PV I
Sbjct: 1   MEARRTSRIPIDPKVRQVGFFAPGALRDRSQSGPLGFSSSPPV--SNISPTGNSLSPVMI 58

Query: 193 PPRRHASDN-LTSVPVNVPM--SPLRKISINENMPVGSYESSQHFLGASEIS 47
           PP RHASDN + S P+ VP+  S LR  ++ + M VGSY++S+  LG S  S
Sbjct: 59  PPPRHASDNFVLSRPLAVPVSDSTLRPPAVEDRMAVGSYDASELLLGTSASS 110


>ref|XP_004138224.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
           [Cucumis sativus] gi|449477110|ref|XP_004154932.1|
           PREDICTED: translation initiation factor eIF-2B subunit
           delta-like [Cucumis sativus]
          Length = 651

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 50/123 (40%), Positives = 71/123 (57%), Gaps = 11/123 (8%)
 Frame = -1

Query: 337 MDTRRVSRTVIDPKIRQVGFIT---------PTSGPPPPLDRTQS-GPASNSLPPVTIPP 188
           MD RR SR +++PK+RQVGF T           SGPP  L   QS  P +NSL PV IPP
Sbjct: 1   MDARRGSR-IVNPKVRQVGFFTLDAPNSPDRSLSGPPNCLPSQQSLSPPTNSLSPVMIPP 59

Query: 187 RRHASDNLTSVPVNVPM-SPLRKISINENMPVGSYESSQHFLGASEISTESMINKFYDDD 11
            RH SDNL S    +P+ +P    +  + +PVGSY  S+  L  S +++ S  ++  D++
Sbjct: 60  PRHLSDNLASRSAVLPVPAPANWRNSTDQIPVGSYNPSETLLATSPMASPS--SRTGDEE 117

Query: 10  VDV 2
           +D+
Sbjct: 118 LDM 120


>ref|XP_002318563.1| predicted protein [Populus trichocarpa] gi|222859236|gb|EEE96783.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 50/111 (45%), Positives = 60/111 (54%), Gaps = 17/111 (15%)
 Frame = -1

Query: 337 MDTRRVSRTVIDPKIRQVGFITPTSGPPPPLDRTQS------------GPASNSLPPVTI 194
           MD RR + TV  P++RQVGF TP + P  P  RTQS             PASNSL PV I
Sbjct: 1   MDARRATTTV--PRVRQVGFFTPNAPPAQP-SRTQSFPRDSSSPPLSNSPASNSLSPVMI 57

Query: 193 PPRRHASDNL-----TSVPVNVPMSPLRKISINENMPVGSYESSQHFLGAS 56
           PP RH SDNL     + +PV  P +  R I  +    VGSY  S+  LG+S
Sbjct: 58  PPPRHLSDNLVHRATSPLPVPEPPAFRRPIRSHHVAVVGSYNPSESLLGSS 108