BLASTX nr result

ID: Coptis24_contig00017030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017030
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18990.3| unnamed protein product [Vitis vinifera]              158   4e-37
ref|XP_004171523.1| PREDICTED: beta-galactosidase 16-like [Cucum...   152   4e-35
ref|XP_004149808.1| PREDICTED: beta-galactosidase 16-like [Cucum...   152   4e-35
ref|XP_002302225.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
emb|CBI18991.3| unnamed protein product [Vitis vinifera]              148   5e-34

>emb|CBI18990.3| unnamed protein product [Vitis vinifera]
          Length = 817

 Score =  158 bits (400), Expect = 4e-37
 Identities = 75/133 (56%), Positives = 97/133 (72%)
 Frame = -1

Query: 407  QSIGRYWSSFYSPKGVPSQTSYHVPRSFLKPTGNLLVLIEEISGNPLQISVDTISNSKVC 228
            QSIGRYW SF +P G PSQ  YH+PRSFLKPTGNLLVL+EE +G+P+ IS+  +S  K+C
Sbjct: 648  QSIGRYWVSFLTPSGKPSQIWYHIPRSFLKPTGNLLVLLEEETGHPVGISIGKVSIPKIC 707

Query: 227  GRVSSSYPPQLSTWGLIARSGRRHQSPPARRPSVQLECPSGKTISKIVFASYGNPLGDCT 48
            G VS S+ P + +  +     ++H++   RRP VQL CPS + IS+I+FAS+G P GDC 
Sbjct: 708  GHVSESHLPPVISRVIY----KKHENHHGRRPKVQLRCPSNRNISRILFASFGTPSGDCQ 763

Query: 47   HYATGSCHSSNTR 9
             YA GSCHSSN+R
Sbjct: 764  SYAVGSCHSSNSR 776


>ref|XP_004171523.1| PREDICTED: beta-galactosidase 16-like [Cucumis sativus]
          Length = 756

 Score =  152 bits (383), Expect = 4e-35
 Identities = 72/135 (53%), Positives = 94/135 (69%)
 Frame = -1

Query: 407 QSIGRYWSSFYSPKGVPSQTSYHVPRSFLKPTGNLLVLIEEISGNPLQISVDTISNSKVC 228
           + IGRYW SF +PKG PSQ  Y+VPRSFLKPT N LV++EE +GNP++IS+D++  +K C
Sbjct: 583 RGIGRYWVSFLTPKGEPSQKWYNVPRSFLKPTDNQLVILEEETGNPVEISLDSVLITKTC 642

Query: 227 GRVSSSYPPQLSTWGLIARSGRRHQSPPARRPSVQLECPSGKTISKIVFASYGNPLGDCT 48
           G+VS S+ P +++W    +   R      RRP VQL CPS K IS I+FAS+G P GDC 
Sbjct: 643 GQVSESHYPLVASWMGAKKQKVRRVKNRTRRPKVQLSCPSKKKISNILFASFGTPSGDCQ 702

Query: 47  HYATGSCHSSNTRRV 3
            YA G CHS N+R +
Sbjct: 703 SYAIGLCHSPNSRAI 717


>ref|XP_004149808.1| PREDICTED: beta-galactosidase 16-like [Cucumis sativus]
          Length = 801

 Score =  152 bits (383), Expect = 4e-35
 Identities = 72/135 (53%), Positives = 94/135 (69%)
 Frame = -1

Query: 407  QSIGRYWSSFYSPKGVPSQTSYHVPRSFLKPTGNLLVLIEEISGNPLQISVDTISNSKVC 228
            + IGRYW SF +PKG PSQ  Y+VPRSFLKPT N LV++EE +GNP++IS+D++  +K C
Sbjct: 628  RGIGRYWVSFLTPKGEPSQKWYNVPRSFLKPTDNQLVILEEETGNPVEISLDSVLITKTC 687

Query: 227  GRVSSSYPPQLSTWGLIARSGRRHQSPPARRPSVQLECPSGKTISKIVFASYGNPLGDCT 48
            G+VS S+ P +++W    +   R      RRP VQL CPS K IS I+FAS+G P GDC 
Sbjct: 688  GQVSESHYPLVASWMGAKKQKVRRVKNRTRRPKVQLSCPSKKKISNILFASFGTPSGDCQ 747

Query: 47   HYATGSCHSSNTRRV 3
             YA G CHS N+R +
Sbjct: 748  SYAIGLCHSPNSRAI 762


>ref|XP_002302225.1| predicted protein [Populus trichocarpa] gi|222843951|gb|EEE81498.1|
            predicted protein [Populus trichocarpa]
          Length = 798

 Score =  150 bits (379), Expect = 1e-34
 Identities = 72/133 (54%), Positives = 92/133 (69%)
 Frame = -1

Query: 407  QSIGRYWSSFYSPKGVPSQTSYHVPRSFLKPTGNLLVLIEEISGNPLQISVDTISNSKVC 228
            +SIGRYW SF    G P QT  H+PRSFLKP+GNLLV++EE  GNPL IS+ T+S +KVC
Sbjct: 625  RSIGRYWVSFLDSDGNPYQTWNHIPRSFLKPSGNLLVILEEERGNPLGISLGTMSITKVC 684

Query: 227  GRVSSSYPPQLSTWGLIARSGRRHQSPPARRPSVQLECPSGKTISKIVFASYGNPLGDCT 48
            G VS S+PP + +W    +     +    RRP VQL CP G+ IS ++F+S+G P GDC 
Sbjct: 685  GHVSISHPPPVISWQGENQINGTRKRKYGRRPKVQLRCPRGRKISSVLFSSFGTPSGDCE 744

Query: 47   HYATGSCHSSNTR 9
             YA GSCH+SN+R
Sbjct: 745  TYAIGSCHASNSR 757


>emb|CBI18991.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  148 bits (373), Expect = 5e-34
 Identities = 72/135 (53%), Positives = 92/135 (68%)
 Frame = -1

Query: 407  QSIGRYWSSFYSPKGVPSQTSYHVPRSFLKPTGNLLVLIEEISGNPLQISVDTISNSKVC 228
            QSIGRYW S+ +P G PSQT Y+VPR+FL P GNLLV+ EE SG+PL+IS+ T+S + VC
Sbjct: 651  QSIGRYWVSYLTPSGEPSQTWYNVPRAFLNPKGNLLVVQEEESGDPLKISIGTVSVTNVC 710

Query: 227  GRVSSSYPPQLSTWGLIARSGRRHQSPPARRPSVQLECPSGKTISKIVFASYGNPLGDCT 48
            G V+ S+PP + +W     S   ++S   + P VQL CP    ISKI FAS+G P+G C 
Sbjct: 711  GHVTDSHPPPIISW---TTSDDGNESHHGKIPKVQLRCPPSSNISKITFASFGTPVGGCE 767

Query: 47   HYATGSCHSSNTRRV 3
             YA GSCHS N+  V
Sbjct: 768  SYAIGSCHSPNSLAV 782


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