BLASTX nr result

ID: Coptis24_contig00017021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017021
         (1256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283295.1| PREDICTED: uncharacterized protein LOC100242...   343   4e-92
ref|XP_002263972.1| PREDICTED: uncharacterized protein LOC100242...   343   5e-92
emb|CBI19416.3| unnamed protein product [Vitis vinifera]              340   6e-91
ref|XP_002527498.1| conserved hypothetical protein [Ricinus comm...   334   2e-89
ref|XP_002313172.1| predicted protein [Populus trichocarpa] gi|2...   334   3e-89

>ref|XP_002283295.1| PREDICTED: uncharacterized protein LOC100242050 [Vitis vinifera]
          Length = 743

 Score =  343 bits (881), Expect = 4e-92
 Identities = 191/330 (57%), Positives = 231/330 (70%), Gaps = 16/330 (4%)
 Frame = +3

Query: 3    FWQETNTRLRRLQDPSST-------------PKLVLSKRFXXXXXXXXXXXXXXXXGMAS 143
            FWQET+ RLRR  +PSS              PKL+  K+                 G  S
Sbjct: 415  FWQETSNRLRRTPEPSSPQSKSNGLRTPAVPPKLIAPKKLLTDSPMSSPRGILPSRGQ-S 473

Query: 144  PLRGPARPVSPSKLXXXXXXXXXXXXXXXXXXNATPSAMGGQVSSMPSILCFAG---RAK 314
            PLRGP RP SPSKL                   A   ++ G +S+ PSIL FA    R K
Sbjct: 474  PLRGPVRPASPSKLVTTSTYSPLRGMPSPTRVRAVVGSLNGNLSNNPSILSFAADVRRGK 533

Query: 315  LGENRVVDAHLLRLLYNRQLQWGFVNARADAALFVQRLTAEKNLYNAWISMSELRESVTL 494
            +GENR+VDAHLLRLL+NR LQW F+NARADA+L VQR+ AE++L NA +++ +LR+SV  
Sbjct: 534  VGENRMVDAHLLRLLHNRYLQWRFINARADASLLVQRMNAEQSLCNARVAIVDLRDSVRD 593

Query: 495  KRIKLQLVRQNLKITSILKGQMTYLEEWGLLDREHTSSLSGAIESLEASTLRLPIVGGAR 674
            KR  LQL+RQ LK+T+ILKGQ+ YL+EWG +DR+H++SLSGAIE+L+ASTLRLP+V GAR
Sbjct: 594  KRKMLQLMRQKLKLTTILKGQIMYLDEWGPMDRDHSNSLSGAIEALKASTLRLPVVSGAR 653

Query: 675  ADIQKMKDAVGSAVDVMQAMASSVCSSLLKVEEVNHLVAELANVILQERALLDQCRDLLS 854
            ADIQ +KDA+ SAVDVMQAMASS+CS L KVEEVN LVAELAN   +ERA LDQCRDLLS
Sbjct: 654  ADIQNLKDAICSAVDVMQAMASSICSLLSKVEEVNSLVAELANTSAKERACLDQCRDLLS 713

Query: 855  TLEAMQVNHCSLRTNILQLKRVPTSLTTQV 944
            TL AMQV  CSLRT+ILQL RVP+SLTT+V
Sbjct: 714  TLAAMQVTDCSLRTHILQLNRVPSSLTTKV 743


>ref|XP_002263972.1| PREDICTED: uncharacterized protein LOC100242868 [Vitis vinifera]
          Length = 639

 Score =  343 bits (880), Expect = 5e-92
 Identities = 193/331 (58%), Positives = 234/331 (70%), Gaps = 17/331 (5%)
 Frame = +3

Query: 3    FWQETNTRLRRLQDPSST------PKLVLSKRFXXXXXXXXXXXXXXXXGMASPLRGPAR 164
            FWQETN+RLRRLQDP S        ++ ++ +F                 M SP+RG  R
Sbjct: 310  FWQETNSRLRRLQDPGSPLSTSPGSRMAVAAKFIQSKKFPSDNPLASPRTMMSPIRGATR 369

Query: 165  PVSPSKLXXXXXXXXXXXXXXXXXX--NATPSAMGGQVSSMPSILCFA---GRAKLGENR 329
            P SPSKL                    NA  S +    S  PSIL F+    R K+GENR
Sbjct: 370  PASPSKLMASSMPVSSPIRASSPARLRNAVASPLSSSSSIAPSILSFSVDVRRGKMGENR 429

Query: 330  VVDAHLLRLLYNRQLQWGFVNARADAALFVQRLTAEKNLYNAWISMSELRESVTLKRIKL 509
            +VDAHLLRLLYNR LQW FVNARADAAL VQR+ AE+NL+NAWI++S+LR+SVT KR+KL
Sbjct: 430  IVDAHLLRLLYNRHLQWRFVNARADAALLVQRMRAERNLWNAWITISKLRDSVTSKRMKL 489

Query: 510  QLVRQNLKITSILKGQMTYLEEWGLLDREHTSSLSGAIESLEASTLRLPIVGGARADIQK 689
            Q +R+ LK+TSILKGQM YLEEW LL+R+H+SSL GAIE+L+ASTLRLP+V GA ADIQ 
Sbjct: 490  QWLRRKLKLTSILKGQMAYLEEWALLERDHSSSLHGAIEALKASTLRLPVV-GAIADIQS 548

Query: 690  MKDAVGSAVDVMQAMASSVCSSLLKVEEVNHLVAELANVILQERALLDQCRDLLSTLEAM 869
            +KDAVGSAVDVMQAMASS+CS L KVEE+N LV E+A+V  +ERALL+QCRD LSTL AM
Sbjct: 549  LKDAVGSAVDVMQAMASSICSLLSKVEEMNSLVVEIADVTAKERALLEQCRDFLSTLAAM 608

Query: 870  QVNHCSLRTNILQLKRVP------TSLTTQV 944
            QV + SLRT+ILQL R+P      T+LTT++
Sbjct: 609  QVKYSSLRTHILQLNRLPATSSLTTTLTTRI 639


>emb|CBI19416.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  340 bits (871), Expect = 6e-91
 Identities = 188/317 (59%), Positives = 226/317 (71%), Gaps = 3/317 (0%)
 Frame = +3

Query: 3    FWQETNTRLRRLQDPSSTPKLVLSKRFXXXXXXXXXXXXXXXXGMASPLRGPARPVSPSK 182
            FWQET+ RLRR  +PSS        R                   ASPLRGP RP SPSK
Sbjct: 281  FWQETSNRLRRTPEPSSPQSKSNGLRTP-----------------ASPLRGPVRPASPSK 323

Query: 183  LXXXXXXXXXXXXXXXXXXNATPSAMGGQVSSMPSILCFAG---RAKLGENRVVDAHLLR 353
            L                   A   ++ G +S+ PSIL FA    R K+GENR+VDAHLLR
Sbjct: 324  LVTTSTYSPLRGMPSPTRVRAVVGSLNGNLSNNPSILSFAADVRRGKVGENRMVDAHLLR 383

Query: 354  LLYNRQLQWGFVNARADAALFVQRLTAEKNLYNAWISMSELRESVTLKRIKLQLVRQNLK 533
            LL+NR LQW F+NARADA+L VQR+ AE++L NA +++ +LR+SV  KR  LQL+RQ LK
Sbjct: 384  LLHNRYLQWRFINARADASLLVQRMNAEQSLCNARVAIVDLRDSVRDKRKMLQLMRQKLK 443

Query: 534  ITSILKGQMTYLEEWGLLDREHTSSLSGAIESLEASTLRLPIVGGARADIQKMKDAVGSA 713
            +T+ILKGQ+ YL+EWG +DR+H++SLSGAIE+L+ASTLRLP+V GARADIQ +KDA+ SA
Sbjct: 444  LTTILKGQIMYLDEWGPMDRDHSNSLSGAIEALKASTLRLPVVSGARADIQNLKDAICSA 503

Query: 714  VDVMQAMASSVCSSLLKVEEVNHLVAELANVILQERALLDQCRDLLSTLEAMQVNHCSLR 893
            VDVMQAMASS+CS L KVEEVN LVAELAN   +ERA LDQCRDLLSTL AMQV  CSLR
Sbjct: 504  VDVMQAMASSICSLLSKVEEVNSLVAELANTSAKERACLDQCRDLLSTLAAMQVTDCSLR 563

Query: 894  TNILQLKRVPTSLTTQV 944
            T+ILQL RVP+SLTT+V
Sbjct: 564  THILQLNRVPSSLTTKV 580


>ref|XP_002527498.1| conserved hypothetical protein [Ricinus communis]
            gi|223533138|gb|EEF34896.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 634

 Score =  334 bits (857), Expect = 2e-89
 Identities = 190/334 (56%), Positives = 230/334 (68%), Gaps = 20/334 (5%)
 Frame = +3

Query: 3    FWQETNTRLRRLQDPSS------------TPKLVLSKRFXXXXXXXXXXXXXXXXGMASP 146
            FWQETN+RLRRLQDP S            + K + SKRF                  +SP
Sbjct: 313  FWQETNSRLRRLQDPGSPLSTSPNPRTSISSKTIQSKRFSSDAPVASPRTFG-----SSP 367

Query: 147  LRGPARPVSPSKLXXXXXXXXXXXXXXXXXXNATPSA---MGGQVSSMPSILCFA---GR 308
            +RG  RP SPSKL                   ++PS    M   +SSMPSIL FA    R
Sbjct: 368  IRGATRPASPSKLWTHSASSPSRGI-------SSPSRGRPMSSNLSSMPSILSFAVDLRR 420

Query: 309  AKLGENRVVDAHLLRLLYNRQLQWGFVNARADAALFVQRLTAEKNLYNAWISMSELRESV 488
             K+GE+R+ DAH+LRLLYN  LQW FVNARADA  FVQR+ AEKNL+NAW+++SELR SV
Sbjct: 421  GKMGEDRIGDAHMLRLLYNHYLQWRFVNARADATFFVQRVNAEKNLWNAWVTISELRHSV 480

Query: 489  TLKRIKLQLVRQNLKITSILKGQMTYLEEWGLLDREHTSSLSGAIESLEASTLRLPIVGG 668
            TLKR+KL L+RQ LK+TSILKGQ+T LEEW LLDR+H++SL GA E+L+ASTLRLPIVG 
Sbjct: 481  TLKRVKLLLLRQKLKLTSILKGQITCLEEWSLLDRDHSTSLEGATEALKASTLRLPIVGK 540

Query: 669  ARADIQKMKDAVGSAVDVMQAMASSVCSSLLKVEEVNHLVAELANVILQERALLDQCRDL 848
              AD+Q +KDAVGSAVDVM AMASS+C    K+EE+N LVAEL NV  +E+ LL+QC+D 
Sbjct: 541  TIADVQNLKDAVGSAVDVMHAMASSICLLSSKMEEINSLVAELVNVTAKEKFLLEQCKDF 600

Query: 849  LSTLEAMQVNHCSLRTNILQLKRVPT--SLTTQV 944
            LSTL AMQV  CSLRT+I+QL R+PT  +LTT+V
Sbjct: 601  LSTLAAMQVKDCSLRTHIIQLNRLPTTSNLTTRV 634


>ref|XP_002313172.1| predicted protein [Populus trichocarpa] gi|222849580|gb|EEE87127.1|
            predicted protein [Populus trichocarpa]
          Length = 606

 Score =  334 bits (856), Expect = 3e-89
 Identities = 188/331 (56%), Positives = 227/331 (68%), Gaps = 17/331 (5%)
 Frame = +3

Query: 3    FWQETNTRLRRLQDPSS------------TPKLVLSKRFXXXXXXXXXXXXXXXXGMASP 146
            FWQETN+RLRRLQDP S            +PK + SKRF                  ASP
Sbjct: 288  FWQETNSRLRRLQDPGSPLSTSPGSRMGVSPKAIQSKRFSSDGPLSSPRMLA-----ASP 342

Query: 147  LRGPARPVSPSKLXXXXXXXXXXXXXXXXXXNATPSAMGGQVSSMPSILCFA---GRAKL 317
            +RG  RP SPSKL                   ++PS +    SS PSIL F+    R K+
Sbjct: 343  IRGATRPASPSKLWTTSASSPSRGM-------SSPSRVRSMSSSSPSILSFSVDLRRGKM 395

Query: 318  GENRVVDAHLLRLLYNRQLQWGFVNARADAALFVQRLTAEKNLYNAWISMSELRESVTLK 497
            GE+R+VDAH+LRLLYNR LQW FVNAR DA   VQRL AEKNL+NAW+++SELR SVTL+
Sbjct: 396  GEDRIVDAHVLRLLYNRYLQWRFVNAREDATFMVQRLNAEKNLWNAWVTISELRHSVTLR 455

Query: 498  RIKLQLVRQNLKITSILKGQMTYLEEWGLLDREHTSSLSGAIESLEASTLRLPIVGGARA 677
            R+KL L+RQ LK+TSILKGQ+ +LEEW  LDR H+SSL GA E+L+ASTLRLP+VG   A
Sbjct: 456  RVKLLLLRQKLKLTSILKGQIAHLEEWSHLDRGHSSSLEGATEALKASTLRLPVVGKTVA 515

Query: 678  DIQKMKDAVGSAVDVMQAMASSVCSSLLKVEEVNHLVAELANVILQERALLDQCRDLLST 857
            D+Q +KDAVGSAVDVMQAMASS+CS   KVE++N LVAEL NV  +ER +L QC+D LST
Sbjct: 516  DVQNLKDAVGSAVDVMQAMASSICSLSSKVEDMNSLVAELVNVTAKERHMLQQCKDFLST 575

Query: 858  LEAMQVNHCSLRTNILQLKRVP--TSLTTQV 944
            L  +QV  CS+RT+ILQL R+P  TSLTT+V
Sbjct: 576  LATVQVKDCSVRTHILQLNRLPTTTSLTTRV 606


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