BLASTX nr result

ID: Coptis24_contig00016991 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016991
         (1774 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316535.1| arogenate/prephenate dehydratase [Populus tr...   491   e-136
ref|XP_002518471.1| prephenate dehydratase, putative [Ricinus co...   490   e-136
ref|XP_002305566.1| arogenate/prephenate dehydratase [Populus tr...   484   e-134
gb|ABR17815.1| unknown [Picea sitchensis]                             483   e-134
ref|XP_002268124.2| PREDICTED: arogenate dehydratase/prephenate ...   479   e-133

>ref|XP_002316535.1| arogenate/prephenate dehydratase [Populus trichocarpa]
            gi|222859600|gb|EEE97147.1| arogenate/prephenate
            dehydratase [Populus trichocarpa]
          Length = 400

 Score =  491 bits (1265), Expect = e-136
 Identities = 246/344 (71%), Positives = 291/344 (84%), Gaps = 9/344 (2%)
 Frame = +3

Query: 420  QAAITPVEDD---------GHLSSSAQSVELSGIQRNMNVLPRPLTSKDLSPSSDGCSNV 572
            Q AITPVED+            +   Q  +  G  +++N+LP+PL++ DLS S    + V
Sbjct: 55   QRAITPVEDEKPSAPQVDTSRATDQVQDTQSRGFHKDLNLLPKPLSAADLSSSPGNGAQV 114

Query: 573  RVAYKGAPGAFSEAAALKAYPLCETVPCEEFEAAFKAVELWVVNKAVLPIESSVGGSVHR 752
            RVAY+G PGA+SEAAALKAYP CETVPC++FEAAFKAVELW+V+KAVLPIE+SVGGS+HR
Sbjct: 115  RVAYQGIPGAYSEAAALKAYPKCETVPCDQFEAAFKAVELWLVDKAVLPIENSVGGSIHR 174

Query: 753  NYDLLLRHRLHIVGEVQMVVQHCLLGLPGVRMEELKRVISHPQALAQCKISLNKLAVVKE 932
            NYDLLLRHRLHIVGEVQMVV HCLLGLPGV  EELKRV+SHPQALAQC+++L KL +++ 
Sbjct: 175  NYDLLLRHRLHIVGEVQMVVNHCLLGLPGVPKEELKRVLSHPQALAQCEMTLTKLGIIRV 234

Query: 933  SVDDTAGAAQLVASINLRDTGAIASARAAEIYGLNILAERIEDDSDNNITRFLILSREPV 1112
            S DD+AGAAQ+V +   RDTGAIASARAA+IYGLNIL E+I+DD D+NITRFLIL+REP+
Sbjct: 235  SADDSAGAAQMVVANGERDTGAIASARAADIYGLNILLEKIQDD-DDNITRFLILAREPM 293

Query: 1113 IPRADRPFKTSIVFTLEEGPGILFKALAVFALRGINMTKIESRPQRKRPMRVVDECDSGS 1292
            IP ++RP KTSIVFTLEEGPG+LFKALAVFALR IN+TKIESRPQRKRP+RVVD+ + GS
Sbjct: 294  IPGSNRPHKTSIVFTLEEGPGMLFKALAVFALRDINLTKIESRPQRKRPLRVVDDSNKGS 353

Query: 1293 AKYFDYLFYIDFEASMAEPRAQNALGHLQELAPFLRVLGCYPID 1424
            A+YFDYLFYIDF+ASMAEPRAQ+AL HLQE A FLRVLGCYP D
Sbjct: 354  ARYFDYLFYIDFDASMAEPRAQHALAHLQEFARFLRVLGCYPTD 397


>ref|XP_002518471.1| prephenate dehydratase, putative [Ricinus communis]
            gi|223542316|gb|EEF43858.1| prephenate dehydratase,
            putative [Ricinus communis]
          Length = 403

 Score =  490 bits (1262), Expect = e-136
 Identities = 249/351 (70%), Positives = 296/351 (84%), Gaps = 9/351 (2%)
 Frame = +3

Query: 402  CVLGGKQAAITPVEDDGHLS---SSAQSVEL------SGIQRNMNVLPRPLTSKDLSPSS 554
            C+    Q AITPVED+   +    S+Q++E       S   +++N+LP+PL++ D+S S 
Sbjct: 52   CLAVLAQRAITPVEDEKPCTPEVESSQAIEKVQDTQSSSFHKDLNLLPKPLSATDISSSR 111

Query: 555  DGCSNVRVAYKGAPGAFSEAAALKAYPLCETVPCEEFEAAFKAVELWVVNKAVLPIESSV 734
            D  + VRVAY+G  GA+SEAA LKAYP CETVPCE FEA FKAVELW+V+KAVLPIE+SV
Sbjct: 112  DDGTKVRVAYQGIAGAYSEAAVLKAYPKCETVPCEHFEAVFKAVELWLVDKAVLPIENSV 171

Query: 735  GGSVHRNYDLLLRHRLHIVGEVQMVVQHCLLGLPGVRMEELKRVISHPQALAQCKISLNK 914
            GGS+HRNYDLLLRHRLHIVGEVQM V HCLLGLPGV+ +ELK+V+SHPQAL+ C+++L++
Sbjct: 172  GGSIHRNYDLLLRHRLHIVGEVQMAVNHCLLGLPGVQKQELKQVLSHPQALSHCEMTLSE 231

Query: 915  LAVVKESVDDTAGAAQLVASINLRDTGAIASARAAEIYGLNILAERIEDDSDNNITRFLI 1094
            L VV+ S DDTAGAAQ+VA+   RDTGAIASARAAEIYGL ILAE+ +DD D+NITRFLI
Sbjct: 232  LGVVRVSTDDTAGAAQMVATGGTRDTGAIASARAAEIYGLEILAEKFQDD-DDNITRFLI 290

Query: 1095 LSREPVIPRADRPFKTSIVFTLEEGPGILFKALAVFALRGINMTKIESRPQRKRPMRVVD 1274
            L+REPVIP  DR +KTSIVFTLEEGPGILFKALAVFALRGIN+TKIESRPQ+ RP+RVVD
Sbjct: 291  LAREPVIPGTDRSYKTSIVFTLEEGPGILFKALAVFALRGINLTKIESRPQKNRPLRVVD 350

Query: 1275 ECDSGSAKYFDYLFYIDFEASMAEPRAQNALGHLQELAPFLRVLGCYPIDT 1427
            + + GSA+YFDYLFYIDFEASMAEPRAQ+ALGHLQE A FLRVLGCYP+DT
Sbjct: 351  DSNKGSARYFDYLFYIDFEASMAEPRAQSALGHLQEFARFLRVLGCYPMDT 401


>ref|XP_002305566.1| arogenate/prephenate dehydratase [Populus trichocarpa]
            gi|222848530|gb|EEE86077.1| arogenate/prephenate
            dehydratase [Populus trichocarpa]
          Length = 397

 Score =  484 bits (1245), Expect = e-134
 Identities = 247/346 (71%), Positives = 284/346 (82%), Gaps = 9/346 (2%)
 Frame = +3

Query: 420  QAAITPVEDDGHLS---------SSAQSVELSGIQRNMNVLPRPLTSKDLSPSSDGCSNV 572
            Q AITPVED+  L             Q  +  G  +++N+LP+PL++ D+  S    + V
Sbjct: 52   QRAITPVEDEKPLIPQVETSEAIDQVQDTQSRGFHKDLNLLPKPLSATDIFSSPRNSAKV 111

Query: 573  RVAYKGAPGAFSEAAALKAYPLCETVPCEEFEAAFKAVELWVVNKAVLPIESSVGGSVHR 752
            RVAY+G PGA+ EAAALKAYP CETVPCEEFEAAFKAVELW+V+KAVLPIESSVGGS+HR
Sbjct: 112  RVAYQGMPGAYGEAAALKAYPKCETVPCEEFEAAFKAVELWLVDKAVLPIESSVGGSIHR 171

Query: 753  NYDLLLRHRLHIVGEVQMVVQHCLLGLPGVRMEELKRVISHPQALAQCKISLNKLAVVKE 932
            NYDLLLRHRLHIVGEVQMVV HCLLGLPGV+ EELKRV+SHPQAL QC + L KL VV+ 
Sbjct: 172  NYDLLLRHRLHIVGEVQMVVNHCLLGLPGVQKEELKRVLSHPQALDQCDMILTKLGVVRV 231

Query: 933  SVDDTAGAAQLVASINLRDTGAIASARAAEIYGLNILAERIEDDSDNNITRFLILSREPV 1112
            S DDTAGAA +VA+   RD+G IAS RAAEIYGLNIL E+I+DD D+NITRFLIL+REP+
Sbjct: 232  STDDTAGAALMVAASGERDSGVIASDRAAEIYGLNILLEKIQDD-DDNITRFLILAREPI 290

Query: 1113 IPRADRPFKTSIVFTLEEGPGILFKALAVFALRGINMTKIESRPQRKRPMRVVDECDSGS 1292
            IP  DRP KTSIVFTLEEGPG+LFKALAVFA R IN+TKIESRPQRKRP+RVVD+ + GS
Sbjct: 291  IPGTDRPHKTSIVFTLEEGPGMLFKALAVFASRDINLTKIESRPQRKRPLRVVDDSNKGS 350

Query: 1293 AKYFDYLFYIDFEASMAEPRAQNALGHLQELAPFLRVLGCYPIDTA 1430
            A+YFDYLFYIDFEASMAEPRAQ+A+ HLQE A FLRVLGCY  D+A
Sbjct: 351  ARYFDYLFYIDFEASMAEPRAQHAMAHLQEFASFLRVLGCYATDSA 396


>gb|ABR17815.1| unknown [Picea sitchensis]
          Length = 402

 Score =  483 bits (1242), Expect = e-134
 Identities = 236/317 (74%), Positives = 281/317 (88%)
 Frame = +3

Query: 474  SVELSGIQRNMNVLPRPLTSKDLSPSSDGCSNVRVAYKGAPGAFSEAAALKAYPLCETVP 653
            S+E   + +++  LPRPL+  DL+      S VRVAY+G PGA+SEAAALKAYP CE VP
Sbjct: 80   SLESGTVPKDLVSLPRPLSVTDLATPPSHGSQVRVAYQGVPGAYSEAAALKAYPQCEAVP 139

Query: 654  CEEFEAAFKAVELWVVNKAVLPIESSVGGSVHRNYDLLLRHRLHIVGEVQMVVQHCLLGL 833
            CE+FEAAF+AVELW+V+KAVLPIE+S+GGS+HRNYDLLLRHRLHIVGEVQ+ V HCLLGL
Sbjct: 140  CEQFEAAFQAVELWLVDKAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVQLAVHHCLLGL 199

Query: 834  PGVRMEELKRVISHPQALAQCKISLNKLAVVKESVDDTAGAAQLVASINLRDTGAIASAR 1013
            PGV+ EELKRV+SHPQAL+QC+ +L+ L V++E+ DDTAGAAQ +A+ NLRDTGA+ASAR
Sbjct: 200  PGVKKEELKRVVSHPQALSQCEHTLSTLGVIREAADDTAGAAQFIAANNLRDTGAVASAR 259

Query: 1014 AAEIYGLNILAERIEDDSDNNITRFLILSREPVIPRADRPFKTSIVFTLEEGPGILFKAL 1193
            AAEIYGL ILA+ I+DDSD N+TRFL+L+REP+IPR DRPFKTSIVFTLEEGPG+LFKAL
Sbjct: 260  AAEIYGLQILADGIQDDSD-NVTRFLMLAREPIIPRIDRPFKTSIVFTLEEGPGVLFKAL 318

Query: 1194 AVFALRGINMTKIESRPQRKRPMRVVDECDSGSAKYFDYLFYIDFEASMAEPRAQNALGH 1373
            AVFALR IN+TKIESRPQRKRP+RVVD+ ++G+AKYFDYLFYIDFEASMA+PRAQNALGH
Sbjct: 319  AVFALRDINLTKIESRPQRKRPLRVVDDSNTGAAKYFDYLFYIDFEASMADPRAQNALGH 378

Query: 1374 LQELAPFLRVLGCYPID 1424
            LQE A F+RVLG YP+D
Sbjct: 379  LQEFATFMRVLGSYPMD 395


>ref|XP_002268124.2| PREDICTED: arogenate dehydratase/prephenate dehydratase 1,
            chloroplastic-like [Vitis vinifera]
          Length = 575

 Score =  479 bits (1234), Expect = e-133
 Identities = 248/374 (66%), Positives = 295/374 (78%), Gaps = 14/374 (3%)
 Frame = +3

Query: 345  DSSYKRTGLVLNSKRDVV-----SCVLGGKQAAITPVEDDGHL---------SSSAQSVE 482
            D   +R G  LN + D        C+    Q A  PVED+  L         +  A+  E
Sbjct: 91   DLGGRRAGRALNLRFDFERFRKWECLAVLGQRATIPVEDEKPLRPGVESPGGADEAKETE 150

Query: 483  LSGIQRNMNVLPRPLTSKDLSPSSDGCSNVRVAYKGAPGAFSEAAALKAYPLCETVPCEE 662
                 R++N LPRPL++ D S S      VRVAY+GAPGA+SE AA+KAYP CE VPC++
Sbjct: 151  PRAFHRDLNSLPRPLSATDPSSSPSNGGKVRVAYQGAPGAYSEEAAMKAYPKCEAVPCDD 210

Query: 663  FEAAFKAVELWVVNKAVLPIESSVGGSVHRNYDLLLRHRLHIVGEVQMVVQHCLLGLPGV 842
            FEAAFKAVELW+V KAVLPIE+SVGGS+HRNYDLLL HRLHIVGEVQMVV HCLLGLPGV
Sbjct: 211  FEAAFKAVELWLVEKAVLPIENSVGGSIHRNYDLLLGHRLHIVGEVQMVVNHCLLGLPGV 270

Query: 843  RMEELKRVISHPQALAQCKISLNKLAVVKESVDDTAGAAQLVASINLRDTGAIASARAAE 1022
            R +ELKRV+SHPQA AQC ++LN+L +++ S +DTAGAAQ+VAS  L++TGAIASARAA 
Sbjct: 271  RKDELKRVLSHPQAFAQCDMTLNELGLLRISTEDTAGAAQIVASDGLKNTGAIASARAAV 330

Query: 1023 IYGLNILAERIEDDSDNNITRFLILSREPVIPRADRPFKTSIVFTLEEGPGILFKALAVF 1202
            IYGLNIL E+I+DD D NITRFLIL+REP+IP  +RP+KTSIVF+L+EGPG+LFKALAVF
Sbjct: 331  IYGLNILEEKIQDDCD-NITRFLILAREPIIPGLERPYKTSIVFSLDEGPGVLFKALAVF 389

Query: 1203 ALRGINMTKIESRPQRKRPMRVVDECDSGSAKYFDYLFYIDFEASMAEPRAQNALGHLQE 1382
            ALR I+++KIESRPQRKRP+R+VD+ + GSAKYFDYLFYIDFEASMAEPRAQ ALGHLQE
Sbjct: 390  ALRDISLSKIESRPQRKRPLRIVDDSNKGSAKYFDYLFYIDFEASMAEPRAQYALGHLQE 449

Query: 1383 LAPFLRVLGCYPID 1424
             A FLRVLGCYP+D
Sbjct: 450  FARFLRVLGCYPMD 463


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