BLASTX nr result
ID: Coptis24_contig00016972
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00016972
(1441 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004152237.1| PREDICTED: fumarate hydratase 1, mitochondri... 751 0.0
ref|XP_002302734.1| predicted protein [Populus trichocarpa] gi|2... 747 0.0
ref|XP_002283168.2| PREDICTED: fumarate hydratase 2, chloroplast... 740 0.0
ref|XP_002523133.1| aspartate ammonia lyase, putative [Ricinus c... 738 0.0
ref|XP_003557953.1| PREDICTED: fumarate hydratase 2, chloroplast... 738 0.0
>ref|XP_004152237.1| PREDICTED: fumarate hydratase 1, mitochondrial-like [Cucumis sativus]
gi|449484240|ref|XP_004156827.1| PREDICTED: fumarate
hydratase 1, mitochondrial-like [Cucumis sativus]
Length = 495
Score = 751 bits (1939), Expect = 0.0
Identities = 371/423 (87%), Positives = 393/423 (92%)
Frame = +3
Query: 171 FSTSFREERDTFGPIQVPSDKLWGAQTQRSLHNFDIGGARERMPGPIIHAFGVLKKCAAK 350
+STSFREERDTFGPI VPSD+LWGAQTQRSL NF+IGG RERMP PII AFGVLKKCAAK
Sbjct: 30 YSTSFREERDTFGPINVPSDRLWGAQTQRSLQNFEIGGDRERMPEPIIRAFGVLKKCAAK 89
Query: 351 VNMEYGLDPTIGKAIMQAAQEVSEGKLDDHFPLVIWQTGSGTQSNMNANEVIANRASEIL 530
VNM+YGLDPTIGKAIMQAAQEV+EGKL+DHFPLV+WQTGSGTQSNMNANEVIANRASEIL
Sbjct: 90 VNMDYGLDPTIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRASEIL 149
Query: 531 GHKRGEKFVHPNDHVNRSQSSNDTFPTVMHIAAAVEMNSAFIPKLKQLHTTLHSKSLEFN 710
GHKRG+KFVHPNDHVNRSQSSNDTFPTVMHIAAA E+NS FIPKLK LH++L+SKS+EF
Sbjct: 150 GHKRGDKFVHPNDHVNRSQSSNDTFPTVMHIAAATEINSKFIPKLKTLHSSLYSKSIEFK 209
Query: 711 DIIKIGRTHTQDATPLTLGQEFSGYSTQVRYGIDRVMCTLPRMYQLAQGGTAVGTGLNTK 890
DI+KIGRTHTQDATPLTLGQEFSGY+TQV+YGIDRV+CTLPRMYQLAQGGTAVGTGLNTK
Sbjct: 210 DIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVLCTLPRMYQLAQGGTAVGTGLNTK 269
Query: 891 KGFDVKIADAVAEETNLPFVTAENKFEALAAHDAFVETSGALNTVSASLMKIGNDIRLLG 1070
KGFDVKIA AVAEETNLPFVTAENKFEALAAHDAFVETSG+LNTV+ASLMKI NDIRLLG
Sbjct: 270 KGFDVKIAAAVAEETNLPFVTAENKFEALAAHDAFVETSGSLNTVAASLMKIANDIRLLG 329
Query: 1071 SGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGDHVAITVGGSNGHFELN 1250
SGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMG+HVAITVGGSNGHFELN
Sbjct: 330 SGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHVAITVGGSNGHFELN 389
Query: 1251 VYKPXXXXXXXXXXXXXXXXXXXFEKNCVRGIEANRERISKLLHESLMLVTSLNPKIGYD 1430
VYKP FEKNCVRGI+ANRERISKLLHESLMLVT+LNPKIGYD
Sbjct: 390 VYKPMIANALLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTALNPKIGYD 449
Query: 1431 NAA 1439
NAA
Sbjct: 450 NAA 452
>ref|XP_002302734.1| predicted protein [Populus trichocarpa] gi|222844460|gb|EEE82007.1|
predicted protein [Populus trichocarpa]
Length = 490
Score = 747 bits (1928), Expect = 0.0
Identities = 369/423 (87%), Positives = 387/423 (91%)
Frame = +3
Query: 171 FSTSFREERDTFGPIQVPSDKLWGAQTQRSLHNFDIGGARERMPGPIIHAFGVLKKCAAK 350
+ST+FREERDTFGPI VP+DKLWGAQTQRSL NFDIGG RERMP PII AFG+LKKCAAK
Sbjct: 26 YSTAFREERDTFGPISVPADKLWGAQTQRSLQNFDIGGDRERMPEPIIRAFGILKKCAAK 85
Query: 351 VNMEYGLDPTIGKAIMQAAQEVSEGKLDDHFPLVIWQTGSGTQSNMNANEVIANRASEIL 530
VNM+YGLDP+IGKAIMQAA EV+EGKL DHFPLV+WQTGSGTQSNMNANEVIANRA+EIL
Sbjct: 86 VNMQYGLDPSIGKAIMQAAHEVAEGKLSDHFPLVVWQTGSGTQSNMNANEVIANRAAEIL 145
Query: 531 GHKRGEKFVHPNDHVNRSQSSNDTFPTVMHIAAAVEMNSAFIPKLKQLHTTLHSKSLEFN 710
GHKRGEKFVHPNDHVNRSQSSNDTFPTVMHIAAA E+NS IPKLK LH TLHSKS+EF
Sbjct: 146 GHKRGEKFVHPNDHVNRSQSSNDTFPTVMHIAAATEINSRLIPKLKTLHLTLHSKSVEFK 205
Query: 711 DIIKIGRTHTQDATPLTLGQEFSGYSTQVRYGIDRVMCTLPRMYQLAQGGTAVGTGLNTK 890
DI+KIGRTHTQDATPLTLGQEFSGY+TQV+YGIDRVMCTLP MYQLAQGGTAVGTGLNTK
Sbjct: 206 DIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVMCTLPHMYQLAQGGTAVGTGLNTK 265
Query: 891 KGFDVKIADAVAEETNLPFVTAENKFEALAAHDAFVETSGALNTVSASLMKIGNDIRLLG 1070
KGFDVKIA AVAEETNLPFVTAENKFEALAAHDAFVETSGALNTV+ SLMKI NDIRLLG
Sbjct: 266 KGFDVKIASAVAEETNLPFVTAENKFEALAAHDAFVETSGALNTVATSLMKIANDIRLLG 325
Query: 1071 SGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGDHVAITVGGSNGHFELN 1250
SGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMG+HVAITVGGSNGHFELN
Sbjct: 326 SGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHVAITVGGSNGHFELN 385
Query: 1251 VYKPXXXXXXXXXXXXXXXXXXXFEKNCVRGIEANRERISKLLHESLMLVTSLNPKIGYD 1430
V+KP FEKNCVRGI+ANRERISKLLHESLMLVTSLNPKIGYD
Sbjct: 386 VFKPMIASGLLHSIRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYD 445
Query: 1431 NAA 1439
NAA
Sbjct: 446 NAA 448
>ref|XP_002283168.2| PREDICTED: fumarate hydratase 2, chloroplastic-like [Vitis vinifera]
gi|296089733|emb|CBI39552.3| unnamed protein product
[Vitis vinifera]
Length = 496
Score = 740 bits (1910), Expect = 0.0
Identities = 368/424 (86%), Positives = 387/424 (91%), Gaps = 1/424 (0%)
Frame = +3
Query: 171 FSTSFREERDTFGPIQVPSDKLWGAQTQRSLHNFDIGGARERMPGPIIHAFGVLKKCAAK 350
FSTSFREE+DT G + VP DKLWGAQTQRSL NF+IGG ERMP PII AFG+LKKCAAK
Sbjct: 31 FSTSFREEKDTLGTVLVPDDKLWGAQTQRSLQNFEIGGESERMPEPIIRAFGILKKCAAK 90
Query: 351 VNMEYGLDPTIGKAIMQAAQEVSEGKLDDHFPLVIWQTGSGTQSNMNANEVIANRASEIL 530
VNMEYGLDP+IGKAIMQAAQEV+EGKL+DHFPLVIWQTGSGTQSNMNANEVIANRA+EIL
Sbjct: 91 VNMEYGLDPSIGKAIMQAAQEVAEGKLNDHFPLVIWQTGSGTQSNMNANEVIANRAAEIL 150
Query: 531 GHKRGEKFVHPNDHVNRSQSSNDTFPTVMHIAAAVEMNSAFIPKLKQLHTTLHSKSLEFN 710
GHKRGEKFVHPNDHVNRSQSSNDTFPTVMHIAA VE+NS FIPKLKQLHT+LHSKSLEF
Sbjct: 151 GHKRGEKFVHPNDHVNRSQSSNDTFPTVMHIAAGVEINSRFIPKLKQLHTSLHSKSLEFK 210
Query: 711 DIIKIGRTHTQDATPLTLGQEFSGYSTQVRYGIDRVMCTLPRMYQ-LAQGGTAVGTGLNT 887
DIIKIGRTHTQDATPLTLGQEFSGYSTQV+YGIDRVMCTLPRMYQ LAQGG AVGTGLNT
Sbjct: 211 DIIKIGRTHTQDATPLTLGQEFSGYSTQVKYGIDRVMCTLPRMYQYLAQGGMAVGTGLNT 270
Query: 888 KKGFDVKIADAVAEETNLPFVTAENKFEALAAHDAFVETSGALNTVSASLMKIGNDIRLL 1067
KKGFDVKIA VAEETNLPF+T+ENKFEALAAHDAFVETSGALNT+ ASLMKIGNDIRLL
Sbjct: 271 KKGFDVKIAATVAEETNLPFITSENKFEALAAHDAFVETSGALNTICASLMKIGNDIRLL 330
Query: 1068 GSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGDHVAITVGGSNGHFEL 1247
GSGPRCGLGEL LP+NEPGSSIMPGKVNPTQCEALTMVCAQVMG+HVAITVGGSNGHFEL
Sbjct: 331 GSGPRCGLGELTLPDNEPGSSIMPGKVNPTQCEALTMVCAQVMGNHVAITVGGSNGHFEL 390
Query: 1248 NVYKPXXXXXXXXXXXXXXXXXXXFEKNCVRGIEANRERISKLLHESLMLVTSLNPKIGY 1427
NVYKP FEKNC+RGI+AN+ERISKLLHESLMLVTSLNPKIGY
Sbjct: 391 NVYKPLIASGLLRSLRLLGDASASFEKNCIRGIQANQERISKLLHESLMLVTSLNPKIGY 450
Query: 1428 DNAA 1439
DNAA
Sbjct: 451 DNAA 454
>ref|XP_002523133.1| aspartate ammonia lyase, putative [Ricinus communis]
gi|223537695|gb|EEF39318.1| aspartate ammonia lyase,
putative [Ricinus communis]
Length = 470
Score = 738 bits (1905), Expect = 0.0
Identities = 361/423 (85%), Positives = 388/423 (91%)
Frame = +3
Query: 171 FSTSFREERDTFGPIQVPSDKLWGAQTQRSLHNFDIGGARERMPGPIIHAFGVLKKCAAK 350
+ST+FREERDTFGPIQVP+DKLWGAQTQRSL NF+IGG RERMP PII AFG+LKKCAAK
Sbjct: 31 YSTAFREERDTFGPIQVPNDKLWGAQTQRSLQNFEIGGERERMPEPIIRAFGILKKCAAK 90
Query: 351 VNMEYGLDPTIGKAIMQAAQEVSEGKLDDHFPLVIWQTGSGTQSNMNANEVIANRASEIL 530
VNMEYGLDP+IGKAIMQAAQEV+EGKL+DHFPLV+WQTGSGTQSNMNANEVIANRA+EIL
Sbjct: 91 VNMEYGLDPSIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEIL 150
Query: 531 GHKRGEKFVHPNDHVNRSQSSNDTFPTVMHIAAAVEMNSAFIPKLKQLHTTLHSKSLEFN 710
GHKRGEK+VHPNDHVNRSQSSNDTFPTVMHIAAA E+N IP L+ L TTLH+KS+EF
Sbjct: 151 GHKRGEKYVHPNDHVNRSQSSNDTFPTVMHIAAATEINKRLIPNLRNLQTTLHAKSVEFK 210
Query: 711 DIIKIGRTHTQDATPLTLGQEFSGYSTQVRYGIDRVMCTLPRMYQLAQGGTAVGTGLNTK 890
DI+KIGRTHTQDATPLTLGQEFSGY+TQV+YGIDR+M TLPRMYQLAQGGTAVGTGLNTK
Sbjct: 211 DIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRIMVTLPRMYQLAQGGTAVGTGLNTK 270
Query: 891 KGFDVKIADAVAEETNLPFVTAENKFEALAAHDAFVETSGALNTVSASLMKIGNDIRLLG 1070
KGFDVKIA AVAEETNLPFVTAENKFEALAAHDAFVE+SGALNT++ SLMKI ND+RLLG
Sbjct: 271 KGFDVKIAAAVAEETNLPFVTAENKFEALAAHDAFVESSGALNTIATSLMKIANDVRLLG 330
Query: 1071 SGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGDHVAITVGGSNGHFELN 1250
SGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMG+HVA+TVGGSNGHFELN
Sbjct: 331 SGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFELN 390
Query: 1251 VYKPXXXXXXXXXXXXXXXXXXXFEKNCVRGIEANRERISKLLHESLMLVTSLNPKIGYD 1430
V+KP FEKNCVRGI+ANRERISKLLHESLMLVTSLNPKIGYD
Sbjct: 391 VFKPMIASNLLHSVRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYD 450
Query: 1431 NAA 1439
NAA
Sbjct: 451 NAA 453
>ref|XP_003557953.1| PREDICTED: fumarate hydratase 2, chloroplastic-like [Brachypodium
distachyon]
Length = 494
Score = 738 bits (1904), Expect = 0.0
Identities = 365/422 (86%), Positives = 386/422 (91%)
Frame = +3
Query: 174 STSFREERDTFGPIQVPSDKLWGAQTQRSLHNFDIGGARERMPGPIIHAFGVLKKCAAKV 353
ST FREERDTFGPI+VPSDKLWGAQTQRSL NFDIGG RERMP PII AFGVLKKCAAKV
Sbjct: 31 STGFREERDTFGPIRVPSDKLWGAQTQRSLQNFDIGGERERMPVPIIRAFGVLKKCAAKV 90
Query: 354 NMEYGLDPTIGKAIMQAAQEVSEGKLDDHFPLVIWQTGSGTQSNMNANEVIANRASEILG 533
NMEYGLDPTIGKAIMQAA+EV+EGKLDDHFPLVIWQTGSGTQSNMNANEVIANRA+EILG
Sbjct: 91 NMEYGLDPTIGKAIMQAAEEVAEGKLDDHFPLVIWQTGSGTQSNMNANEVIANRAAEILG 150
Query: 534 HKRGEKFVHPNDHVNRSQSSNDTFPTVMHIAAAVEMNSAFIPKLKQLHTTLHSKSLEFND 713
HKRG+KFVHPNDHVNRSQSSNDTFPTVMHIAAAVE+NS FIP L+QLH +LHSKS EF D
Sbjct: 151 HKRGDKFVHPNDHVNRSQSSNDTFPTVMHIAAAVEINSRFIPSLEQLHKSLHSKSDEFKD 210
Query: 714 IIKIGRTHTQDATPLTLGQEFSGYSTQVRYGIDRVMCTLPRMYQLAQGGTAVGTGLNTKK 893
IIKIGRTHTQDATPLTLGQEFSGY+TQV+YGIDR+ CTLPRMYQLAQGGTAVGTGLNTKK
Sbjct: 211 IIKIGRTHTQDATPLTLGQEFSGYATQVKYGIDRIACTLPRMYQLAQGGTAVGTGLNTKK 270
Query: 894 GFDVKIADAVAEETNLPFVTAENKFEALAAHDAFVETSGALNTVSASLMKIGNDIRLLGS 1073
GFD KIA AVAEET+LPFVTAENKFEALAAHDAFVE+SGA+NT+SASLMKI NDIRLLGS
Sbjct: 271 GFDCKIAAAVAEETDLPFVTAENKFEALAAHDAFVESSGAVNTISASLMKIANDIRLLGS 330
Query: 1074 GPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGDHVAITVGGSNGHFELNV 1253
GPRCGLGEL LPENEPGSSIMPGKVNPTQCEALTMVCAQVMG+HV +T+GGSNGHFELNV
Sbjct: 331 GPRCGLGELSLPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHVGVTIGGSNGHFELNV 390
Query: 1254 YKPXXXXXXXXXXXXXXXXXXXFEKNCVRGIEANRERISKLLHESLMLVTSLNPKIGYDN 1433
+KP FEKNCVRGIEAN +RIS+LLHESLMLVTSLNPKIGYDN
Sbjct: 391 FKPMIAAGLLRSLRLLGDASVSFEKNCVRGIEANHKRISQLLHESLMLVTSLNPKIGYDN 450
Query: 1434 AA 1439
AA
Sbjct: 451 AA 452