BLASTX nr result
ID: Coptis24_contig00016955
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00016955
(1281 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283177.1| PREDICTED: translation initiation factor eIF... 255 e-134
emb|CBI16861.3| unnamed protein product [Vitis vinifera] 255 e-134
ref|XP_003561906.1| PREDICTED: translation initiation factor eIF... 262 e-133
ref|XP_003561905.1| PREDICTED: translation initiation factor eIF... 262 e-133
ref|XP_003543906.1| PREDICTED: translation initiation factor eIF... 253 e-132
>ref|XP_002283177.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
[Vitis vinifera]
Length = 650
Score = 255 bits (652), Expect(2) = e-134
Identities = 120/145 (82%), Positives = 136/145 (93%)
Frame = -2
Query: 728 TYTHINAISYIMHEVTRVFLGASSVLSNGTVYSRVGTASVAMVANAFSVPVLICCETYKF 549
TYTHINA+SYIMHEVTRVFLGASSVLSNGTVYSRVGTA V+MVA+AF VPVL+CCE YKF
Sbjct: 506 TYTHINAVSYIMHEVTRVFLGASSVLSNGTVYSRVGTACVSMVAHAFRVPVLVCCEAYKF 565
Query: 548 HERVQLDSICCNELGDPDAISNVPGREDIKHLNNWTSNENLQILNLLYDATPSDYVSMII 369
+ERVQLDSIC NELGDPDAIS VPGRE+I +L++W +ENLQ+LNL+YDATPSDYVSMII
Sbjct: 566 YERVQLDSICSNELGDPDAISKVPGREEINYLDDWAKSENLQLLNLIYDATPSDYVSMII 625
Query: 368 SDHGMLPPTSVPVIVREYRREQLWL 294
+D+GM+PPTSVPVIVREYRRE LW+
Sbjct: 626 TDYGMVPPTSVPVIVREYRREHLWI 650
Score = 252 bits (643), Expect(2) = e-134
Identities = 126/162 (77%), Positives = 144/162 (88%)
Frame = -1
Query: 1281 MLHAFKDAIRDYSTPSEKVLTRDLTAKISSYISFLNECRPLAISMGNTIKFLKSRIGRLP 1102
ML AF++AI+DYSTP EK L RDLTA++SSY+SFL ECRPL+ISMGN I+FLKSRI +LP
Sbjct: 351 MLQAFQEAIKDYSTPPEKTLVRDLTARLSSYVSFLIECRPLSISMGNAIRFLKSRIAKLP 410
Query: 1101 LTMSESEAKATLYSDIDCFINEKIITADKVIVEHAVTKISDGDVLLTYGSSAVVEMLLLY 922
L++SESEAKA+L SDI+ FINEKI+ ADKVIV HAVTKI DGDVLLTYGSS+ VEM+LLY
Sbjct: 411 LSLSESEAKASLQSDINRFINEKIVLADKVIVRHAVTKIRDGDVLLTYGSSSAVEMILLY 470
Query: 921 AHKLGKQFCVVVVDSRPKLEGQALLRRLLANGLDCTYTHINA 796
AH+LGKQF VVVVDSRPKLEGQ LLRRL+ GL CTYTHINA
Sbjct: 471 AHELGKQFRVVVVDSRPKLEGQLLLRRLVGKGLSCTYTHINA 512
>emb|CBI16861.3| unnamed protein product [Vitis vinifera]
Length = 492
Score = 255 bits (652), Expect(2) = e-134
Identities = 120/145 (82%), Positives = 136/145 (93%)
Frame = -2
Query: 728 TYTHINAISYIMHEVTRVFLGASSVLSNGTVYSRVGTASVAMVANAFSVPVLICCETYKF 549
TYTHINA+SYIMHEVTRVFLGASSVLSNGTVYSRVGTA V+MVA+AF VPVL+CCE YKF
Sbjct: 348 TYTHINAVSYIMHEVTRVFLGASSVLSNGTVYSRVGTACVSMVAHAFRVPVLVCCEAYKF 407
Query: 548 HERVQLDSICCNELGDPDAISNVPGREDIKHLNNWTSNENLQILNLLYDATPSDYVSMII 369
+ERVQLDSIC NELGDPDAIS VPGRE+I +L++W +ENLQ+LNL+YDATPSDYVSMII
Sbjct: 408 YERVQLDSICSNELGDPDAISKVPGREEINYLDDWAKSENLQLLNLIYDATPSDYVSMII 467
Query: 368 SDHGMLPPTSVPVIVREYRREQLWL 294
+D+GM+PPTSVPVIVREYRRE LW+
Sbjct: 468 TDYGMVPPTSVPVIVREYRREHLWI 492
Score = 252 bits (643), Expect(2) = e-134
Identities = 126/162 (77%), Positives = 144/162 (88%)
Frame = -1
Query: 1281 MLHAFKDAIRDYSTPSEKVLTRDLTAKISSYISFLNECRPLAISMGNTIKFLKSRIGRLP 1102
ML AF++AI+DYSTP EK L RDLTA++SSY+SFL ECRPL+ISMGN I+FLKSRI +LP
Sbjct: 193 MLQAFQEAIKDYSTPPEKTLVRDLTARLSSYVSFLIECRPLSISMGNAIRFLKSRIAKLP 252
Query: 1101 LTMSESEAKATLYSDIDCFINEKIITADKVIVEHAVTKISDGDVLLTYGSSAVVEMLLLY 922
L++SESEAKA+L SDI+ FINEKI+ ADKVIV HAVTKI DGDVLLTYGSS+ VEM+LLY
Sbjct: 253 LSLSESEAKASLQSDINRFINEKIVLADKVIVRHAVTKIRDGDVLLTYGSSSAVEMILLY 312
Query: 921 AHKLGKQFCVVVVDSRPKLEGQALLRRLLANGLDCTYTHINA 796
AH+LGKQF VVVVDSRPKLEGQ LLRRL+ GL CTYTHINA
Sbjct: 313 AHELGKQFRVVVVDSRPKLEGQLLLRRLVGKGLSCTYTHINA 354
>ref|XP_003561906.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
isoform 2 [Brachypodium distachyon]
Length = 614
Score = 262 bits (670), Expect(2) = e-133
Identities = 122/145 (84%), Positives = 134/145 (92%)
Frame = -2
Query: 728 TYTHINAISYIMHEVTRVFLGASSVLSNGTVYSRVGTASVAMVANAFSVPVLICCETYKF 549
TYTHINA+SYIMHEVTRVFLGASS+LSNGTVYSRVGTASVAMVA+AF +PVL+CCE YKF
Sbjct: 470 TYTHINAVSYIMHEVTRVFLGASSILSNGTVYSRVGTASVAMVAHAFGIPVLVCCEAYKF 529
Query: 548 HERVQLDSICCNELGDPDAISNVPGREDIKHLNNWTSNENLQILNLLYDATPSDYVSMII 369
HERVQLDSIC NELGDPD IS VPGR D+ HL NW NENLQ+LNL+YDATPSDYVSMII
Sbjct: 530 HERVQLDSICANELGDPDVISKVPGRADLGHLKNWADNENLQLLNLMYDATPSDYVSMII 589
Query: 368 SDHGMLPPTSVPVIVREYRREQLWL 294
+D+GMLPPTSVPVIVREYR+E LW+
Sbjct: 590 TDYGMLPPTSVPVIVREYRKEHLWV 614
Score = 239 bits (610), Expect(2) = e-133
Identities = 116/162 (71%), Positives = 142/162 (87%)
Frame = -1
Query: 1281 MLHAFKDAIRDYSTPSEKVLTRDLTAKISSYISFLNECRPLAISMGNTIKFLKSRIGRLP 1102
ML AF++AI+DYSTP K L+RDLTAKISSY+SF ECRPL+ISMGN I+FLK+RI +LP
Sbjct: 315 MLLAFREAIKDYSTPPNKTLSRDLTAKISSYVSFFIECRPLSISMGNAIRFLKNRIAKLP 374
Query: 1101 LTMSESEAKATLYSDIDCFINEKIITADKVIVEHAVTKISDGDVLLTYGSSAVVEMLLLY 922
LT+SESE K +L +DI+ FINEKI+ AD+VIV HA+TK+ D DVLLTYGSS+VVEM+L Y
Sbjct: 375 LTLSESETKVSLQTDIERFINEKIVVADQVIVSHAITKVRDDDVLLTYGSSSVVEMILNY 434
Query: 921 AHKLGKQFCVVVVDSRPKLEGQALLRRLLANGLDCTYTHINA 796
AH+LG++F V+VVDSRPKLEGQ LLRRL+A G++CTYTHINA
Sbjct: 435 AHELGRKFRVIVVDSRPKLEGQGLLRRLVAKGINCTYTHINA 476
>ref|XP_003561905.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
isoform 1 [Brachypodium distachyon]
Length = 607
Score = 262 bits (670), Expect(2) = e-133
Identities = 122/145 (84%), Positives = 134/145 (92%)
Frame = -2
Query: 728 TYTHINAISYIMHEVTRVFLGASSVLSNGTVYSRVGTASVAMVANAFSVPVLICCETYKF 549
TYTHINA+SYIMHEVTRVFLGASS+LSNGTVYSRVGTASVAMVA+AF +PVL+CCE YKF
Sbjct: 463 TYTHINAVSYIMHEVTRVFLGASSILSNGTVYSRVGTASVAMVAHAFGIPVLVCCEAYKF 522
Query: 548 HERVQLDSICCNELGDPDAISNVPGREDIKHLNNWTSNENLQILNLLYDATPSDYVSMII 369
HERVQLDSIC NELGDPD IS VPGR D+ HL NW NENLQ+LNL+YDATPSDYVSMII
Sbjct: 523 HERVQLDSICANELGDPDVISKVPGRADLGHLKNWADNENLQLLNLMYDATPSDYVSMII 582
Query: 368 SDHGMLPPTSVPVIVREYRREQLWL 294
+D+GMLPPTSVPVIVREYR+E LW+
Sbjct: 583 TDYGMLPPTSVPVIVREYRKEHLWV 607
Score = 239 bits (610), Expect(2) = e-133
Identities = 116/162 (71%), Positives = 142/162 (87%)
Frame = -1
Query: 1281 MLHAFKDAIRDYSTPSEKVLTRDLTAKISSYISFLNECRPLAISMGNTIKFLKSRIGRLP 1102
ML AF++AI+DYSTP K L+RDLTAKISSY+SF ECRPL+ISMGN I+FLK+RI +LP
Sbjct: 308 MLLAFREAIKDYSTPPNKTLSRDLTAKISSYVSFFIECRPLSISMGNAIRFLKNRIAKLP 367
Query: 1101 LTMSESEAKATLYSDIDCFINEKIITADKVIVEHAVTKISDGDVLLTYGSSAVVEMLLLY 922
LT+SESE K +L +DI+ FINEKI+ AD+VIV HA+TK+ D DVLLTYGSS+VVEM+L Y
Sbjct: 368 LTLSESETKVSLQTDIERFINEKIVVADQVIVSHAITKVRDDDVLLTYGSSSVVEMILNY 427
Query: 921 AHKLGKQFCVVVVDSRPKLEGQALLRRLLANGLDCTYTHINA 796
AH+LG++F V+VVDSRPKLEGQ LLRRL+A G++CTYTHINA
Sbjct: 428 AHELGRKFRVIVVDSRPKLEGQGLLRRLVAKGINCTYTHINA 469
>ref|XP_003543906.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
[Glycine max]
Length = 659
Score = 253 bits (646), Expect(2) = e-132
Identities = 118/145 (81%), Positives = 135/145 (93%)
Frame = -2
Query: 728 TYTHINAISYIMHEVTRVFLGASSVLSNGTVYSRVGTASVAMVANAFSVPVLICCETYKF 549
TYTHINA+SYIMHEVTRVFLGAS+VLSNGTVYSRVGTA VAMVA+AF VPV++CCE YKF
Sbjct: 515 TYTHINAVSYIMHEVTRVFLGASAVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKF 574
Query: 548 HERVQLDSICCNELGDPDAISNVPGREDIKHLNNWTSNENLQILNLLYDATPSDYVSMII 369
HERVQLDSIC NELG+PD ISNV GRED+KHL+ W + ENLQ+LNL+YDATPSDYVSMI+
Sbjct: 575 HERVQLDSICSNELGNPDVISNVLGREDVKHLDGWANIENLQLLNLVYDATPSDYVSMIV 634
Query: 368 SDHGMLPPTSVPVIVREYRREQLWL 294
+D+GM+PPTSVPVIVREY REQ+W+
Sbjct: 635 TDYGMVPPTSVPVIVREYGREQVWI 659
Score = 247 bits (631), Expect(2) = e-132
Identities = 123/162 (75%), Positives = 143/162 (88%)
Frame = -1
Query: 1281 MLHAFKDAIRDYSTPSEKVLTRDLTAKISSYISFLNECRPLAISMGNTIKFLKSRIGRLP 1102
ML AF++AI+DY P EK L RDLTAKI SY+SFL ECRPL+ISMGN I+FLKSRI +LP
Sbjct: 360 MLQAFQEAIKDYKVPPEKTLVRDLTAKIGSYVSFLIECRPLSISMGNAIRFLKSRIAKLP 419
Query: 1101 LTMSESEAKATLYSDIDCFINEKIITADKVIVEHAVTKISDGDVLLTYGSSAVVEMLLLY 922
LT+SESEAKA+L SDI+CFI+EKII A+KVIV+HAVTKI DGDVLLT+GSS+ VEM+LL+
Sbjct: 420 LTLSESEAKASLESDIECFISEKIILANKVIVKHAVTKIRDGDVLLTFGSSSAVEMILLH 479
Query: 921 AHKLGKQFCVVVVDSRPKLEGQALLRRLLANGLDCTYTHINA 796
AH+LG+QF VVVVDSRPKL GQ LLRRL+ NGL CTYTHINA
Sbjct: 480 AHELGRQFRVVVVDSRPKLRGQLLLRRLVENGLSCTYTHINA 521