BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016953
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [...   156   2e-36
ref|XP_004151901.1| PREDICTED: glycine-rich RNA-binding protein ...   155   3e-36
ref|XP_002273998.1| PREDICTED: glycine-rich RNA-binding protein ...   151   6e-35
ref|XP_003528518.1| PREDICTED: glycine-rich RNA-binding protein ...   149   2e-34
ref|XP_002884675.1| hypothetical protein ARALYDRAFT_317651 [Arab...   149   2e-34

>ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
           gi|223535380|gb|EEF37054.1| glycine-rich RNA-binding
           protein, putative [Ricinus communis]
          Length = 126

 Score =  156 bits (394), Expect = 2e-36
 Identities = 76/98 (77%), Positives = 91/98 (92%)
 Frame = -3

Query: 416 NNKLFVGGLSLAVDEKSLKEAFSSFGQVTEVRIVYDKDSGRSKGFGFVHFAKDEDAGSAK 237
           N+KLFV GLS +VDEKSLK+AFSSFG+V+EVRI+YDKDSGRS+GFGFV+F+K+ +A  AK
Sbjct: 24  NSKLFVAGLSWSVDEKSLKDAFSSFGEVSEVRIMYDKDSGRSRGFGFVNFSKENEAVCAK 83

Query: 236 DAMDGKAMLGRPLRISFAVEKVRGGPLVVPRLSSVRNN 123
           DAMDGKA+LGRPLRISFA+EKVRGGP+VVPRLSS  +N
Sbjct: 84  DAMDGKALLGRPLRISFALEKVRGGPIVVPRLSSAGDN 121


>ref|XP_004151901.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Cucumis sativus] gi|449522522|ref|XP_004168275.1|
           PREDICTED: glycine-rich RNA-binding protein 2,
           mitochondrial-like [Cucumis sativus]
          Length = 145

 Score =  155 bits (392), Expect = 3e-36
 Identities = 78/107 (72%), Positives = 93/107 (86%)
 Frame = -3

Query: 446 SSCYSTSSLLNNKLFVGGLSLAVDEKSLKEAFSSFGQVTEVRIVYDKDSGRSKGFGFVHF 267
           +S  S+S   NNKLFV GLS ++DE+SLK+AFSSFG+VTEVRIVYDKDSGRS+GFGFV+F
Sbjct: 33  TSPLSSSPSPNNKLFVAGLSWSMDERSLKDAFSSFGEVTEVRIVYDKDSGRSRGFGFVNF 92

Query: 266 AKDEDAGSAKDAMDGKAMLGRPLRISFAVEKVRGGPLVVPRLSSVRN 126
           A   DA  AKDAMDGKA+LGRPLRISFA++KVRG P+VVPRLS++ N
Sbjct: 93  ANGNDAQCAKDAMDGKAVLGRPLRISFALDKVRGEPVVVPRLSNINN 139


>ref|XP_002273998.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
           vinifera] gi|297739201|emb|CBI28852.3| unnamed protein
           product [Vitis vinifera]
          Length = 140

 Score =  151 bits (381), Expect = 6e-35
 Identities = 73/91 (80%), Positives = 84/91 (92%)
 Frame = -3

Query: 416 NNKLFVGGLSLAVDEKSLKEAFSSFGQVTEVRIVYDKDSGRSKGFGFVHFAKDEDAGSAK 237
           N KLFV GLS +VDEKSLK+AFSSFG VTEVRI+YDKDSGRS+GFGFV+F+K+ DA SAK
Sbjct: 37  NTKLFVAGLSWSVDEKSLKDAFSSFGDVTEVRIMYDKDSGRSRGFGFVYFSKEVDARSAK 96

Query: 236 DAMDGKAMLGRPLRISFAVEKVRGGPLVVPR 144
           DAMDGKA LGRPLR+S+A+EKVRGGP+VVPR
Sbjct: 97  DAMDGKAFLGRPLRVSYALEKVRGGPIVVPR 127


>ref|XP_003528518.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Glycine max]
          Length = 137

 Score =  149 bits (377), Expect = 2e-34
 Identities = 75/103 (72%), Positives = 86/103 (83%)
 Frame = -3

Query: 440 CYSTSSLLNNKLFVGGLSLAVDEKSLKEAFSSFGQVTEVRIVYDKDSGRSKGFGFVHFAK 261
           C   S   +NKLFVGGLS +VD KSLKEAFSSFG VTEV IVYDKDSGRS+GFGFV F+ 
Sbjct: 29  CSPPSHASSNKLFVGGLSWSVDHKSLKEAFSSFGDVTEVTIVYDKDSGRSRGFGFVIFSN 88

Query: 260 DEDAGSAKDAMDGKAMLGRPLRISFAVEKVRGGPLVVPRLSSV 132
           ++DA  AKDAMDGKA+LGRPLRI+FA+EK RG P+VVPRLS +
Sbjct: 89  EDDAKCAKDAMDGKALLGRPLRINFALEKARGVPVVVPRLSDI 131


>ref|XP_002884675.1| hypothetical protein ARALYDRAFT_317651 [Arabidopsis lyrata subsp.
           lyrata] gi|297330515|gb|EFH60934.1| hypothetical protein
           ARALYDRAFT_317651 [Arabidopsis lyrata subsp. lyrata]
          Length = 142

 Score =  149 bits (377), Expect = 2e-34
 Identities = 73/106 (68%), Positives = 91/106 (85%)
 Frame = -3

Query: 440 CYSTSSLLNNKLFVGGLSLAVDEKSLKEAFSSFGQVTEVRIVYDKDSGRSKGFGFVHFAK 261
           C S+S+  ++KLF+GGLS +VDE+SLK+AFSSFG+V EVRI YDK SGRS+GFGFV FA+
Sbjct: 31  CTSSSASPSSKLFIGGLSCSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAE 90

Query: 260 DEDAGSAKDAMDGKAMLGRPLRISFAVEKVRGGPLVVPRLSSVRNN 123
           + DA SAKDAMDGK +LGRPLRISFA+E+VRGGP+VVPRL   + +
Sbjct: 91  EGDALSAKDAMDGKGLLGRPLRISFALERVRGGPVVVPRLGKSKRD 136