BLASTX nr result

ID: Coptis24_contig00016930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016930
         (1372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270125.1| PREDICTED: uncharacterized protein LOC100246...   247   6e-63
emb|CAN65660.1| hypothetical protein VITISV_000955 [Vitis vinifera]   244   4e-62
ref|XP_002299532.1| predicted protein [Populus trichocarpa] gi|2...   236   1e-59
ref|XP_002509805.1| conserved hypothetical protein [Ricinus comm...   235   2e-59
emb|CBI34670.3| unnamed protein product [Vitis vinifera]              233   1e-58

>ref|XP_002270125.1| PREDICTED: uncharacterized protein LOC100246220 [Vitis vinifera]
          Length = 758

 Score =  247 bits (630), Expect = 6e-63
 Identities = 131/231 (56%), Positives = 163/231 (70%), Gaps = 2/231 (0%)
 Frame = -2

Query: 1362 DNFDVSPHYPWAPADLHPNLEIAAIVIQVPFEKRECLKDKQVDKLGAKEQKNLFDFSAFD 1183
            D+FD +  YPWAPA+LHP+LEIAAIVIQVPFEKRE LK ++ +K   K   +  D S  +
Sbjct: 505  DDFDAAVPYPWAPANLHPDLEIAAIVIQVPFEKRESLKYRRGEKFSNKVHSDFLDLSMVE 564

Query: 1182 HRNNDNPSGVSRANVKVVTPTRAHGLPSKKSGGIPSPILERWRSGGCCDCGGWDMACPLH 1003
             +  D    +S A VKVVT +  HGLPS  S G PS +L+RWR GG CDCGGWDMACPL 
Sbjct: 565  QKKKD-VLDMSPAKVKVVTASGNHGLPSGDSRG-PSSLLDRWRLGGGCDCGGWDMACPLI 622

Query: 1002 VFDNCEE-KMKD-RYMGNQQPIELFFQGAKDKLAAVTIKSTGEGQYSVDFHARLSKLQAF 829
            VFDN    +++D   M + QP+ELF QGAK+++ A+TI    EGQY+VDFHA+LS LQAF
Sbjct: 623  VFDNPSILRVEDCPLMESPQPLELFVQGAKERVPALTITRVEEGQYAVDFHAQLSTLQAF 682

Query: 828  SICVAILHGCEASTAIEQEKNPQTFHCNSLKVLFDEEVKFLIGAAADKDKR 676
            SICVA+LH  EA +    EKN    HCNSLK+L +EEVKFLI A  +++KR
Sbjct: 683  SICVAMLHSSEAFSTTGDEKNRHLLHCNSLKMLIEEEVKFLIEAVTEEEKR 733


>emb|CAN65660.1| hypothetical protein VITISV_000955 [Vitis vinifera]
          Length = 937

 Score =  244 bits (623), Expect = 4e-62
 Identities = 130/231 (56%), Positives = 158/231 (68%), Gaps = 2/231 (0%)
 Frame = -2

Query: 1362 DNFDVSPHYPWAPADLHPNLEIAAIVIQVPFEKRECLKDKQVDKLGAKEQKNLFDFSAFD 1183
            D+FD +  YPWAPA+LHP+LEIAAIVIQVPFEKRE LK ++ +K   K   +  D S  +
Sbjct: 684  DDFDAAVPYPWAPANLHPDLEIAAIVIQVPFEKRESLKYRRGEKFSNKVHSDFLDLSMVE 743

Query: 1182 HRNNDNPSGVSRANVKVVTPTRAHGLPSKKSGGIPSPILERWRSGGCCDCGGWDMACPLH 1003
             +  D    +S A VKVVT +  HGLPS  S G PS +L+RWR GG CDCGGWDMACPL 
Sbjct: 744  QKKKD-VLDMSPAKVKVVTASGNHGLPSGDSRG-PSSLLDRWRLGGGCDCGGWDMACPLI 801

Query: 1002 VFDNCEEKMKDR--YMGNQQPIELFFQGAKDKLAAVTIKSTGEGQYSVDFHARLSKLQAF 829
            VFDN      +    M   QP+ELF QGAK+++ A+TI    EGQY+VDFHA+LS LQAF
Sbjct: 802  VFDNPSILXVEDCPLMEXPQPLELFVQGAKERVPALTITRVEEGQYAVDFHAQLSTLQAF 861

Query: 828  SICVAILHGCEASTAIEQEKNPQTFHCNSLKVLFDEEVKFLIGAAADKDKR 676
            SICVA+LH  EA +    EKN    HCNSLK+L +EEVKFLI A  ++ KR
Sbjct: 862  SICVAMLHSSEAFSTTGDEKNRHLLHCNSLKMLIEEEVKFLIEAVTEEXKR 912


>ref|XP_002299532.1| predicted protein [Populus trichocarpa] gi|222846790|gb|EEE84337.1|
            predicted protein [Populus trichocarpa]
          Length = 737

 Score =  236 bits (601), Expect = 1e-59
 Identities = 126/232 (54%), Positives = 155/232 (66%), Gaps = 4/232 (1%)
 Frame = -2

Query: 1359 NFDVSPHYPWAPADLHPNLEIAAIVIQVPFEKRECLKDKQVDKLGAKEQKNLFDFSAFDH 1180
            +FD S  YP A A LHP+LEIAA+VIQ+PF KRE LK K+ DK   +   NL + S  + 
Sbjct: 484  HFDSSNPYPSASAVLHPDLEIAAVVIQLPFAKRESLKYKRGDKGSDEMHSNLLNLSVGEQ 543

Query: 1179 RNNDNPSGVSRANVKVVTPTRAHGLPSKKSGGIPSPILERWRSGGCCDCGGWDMACPLHV 1000
            R    P   +  NVKVV PT  H LPS  S G PS +L+RWRSGG CDCGGWDMACPL V
Sbjct: 544  RRKTIPDKENPENVKVVIPTGNHSLPSGDSRG-PSSLLDRWRSGGGCDCGGWDMACPLTV 602

Query: 999  FDN----CEEKMKDRYMGNQQPIELFFQGAKDKLAAVTIKSTGEGQYSVDFHARLSKLQA 832
            F N    C E   +  + NQ+P+ELF  G K+ + A+T+    EGQY+VDFHA+LS LQA
Sbjct: 603  FGNPGIQCAED--EPLLDNQRPLELFLMGTKENIPALTMTVLEEGQYAVDFHAQLSTLQA 660

Query: 831  FSICVAILHGCEASTAIEQEKNPQTFHCNSLKVLFDEEVKFLIGAAADKDKR 676
            FSICVAILHG EA+    +E+  Q  HCNSLK+L +EEVKFLI    +++KR
Sbjct: 661  FSICVAILHGTEATGVTREERGNQLSHCNSLKMLIEEEVKFLIETVTEEEKR 712


>ref|XP_002509805.1| conserved hypothetical protein [Ricinus communis]
            gi|223549704|gb|EEF51192.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 736

 Score =  235 bits (599), Expect = 2e-59
 Identities = 128/235 (54%), Positives = 159/235 (67%), Gaps = 5/235 (2%)
 Frame = -2

Query: 1365 TDNFDVSPHYPWAPADLHPNLEIAAIVIQVPFEKRECLKDKQVDKLGAKEQKNLFDFSAF 1186
            T N D S  YPW  A LH +LEIAAIV+Q+PF KRE LK K+ DK   K  +NL + S  
Sbjct: 478  TGNIDSSNPYPWPSAVLHADLEIAAIVVQLPFAKRESLKYKRGDKSSDKAHRNLLNNSMN 537

Query: 1185 DH-RNNDNPSGVSRANVKVVTPTRAHGLPSKKSGGIPSPILERWRSGGCCDCGGWDMACP 1009
            +H R     S  S   +KVV PT  H LP  ++ G PS +L RWRSGG CDCGGWDMACP
Sbjct: 538  EHGRKGGFTSRESPEKLKVVIPTGNHSLPIDENQG-PSSLLNRWRSGGGCDCGGWDMACP 596

Query: 1008 LHVFD----NCEEKMKDRYMGNQQPIELFFQGAKDKLAAVTIKSTGEGQYSVDFHARLSK 841
            L VF     NC E +    + NQQP+ELF QG K K+ A+T++   EG+Y+VDFHA+LS 
Sbjct: 597  LTVFGSPSINCAEDVL--LIDNQQPLELFVQGTKQKIPALTMRIVEEGKYAVDFHAQLST 654

Query: 840  LQAFSICVAILHGCEASTAIEQEKNPQTFHCNSLKVLFDEEVKFLIGAAADKDKR 676
            LQAFSICVAILHG EAS++  +EK+ Q  HCNSLKVL +EEV+FLI A   ++++
Sbjct: 655  LQAFSICVAILHGAEASSSTGEEKSKQLPHCNSLKVLIEEEVQFLIEAVTKEEEK 709


>emb|CBI34670.3| unnamed protein product [Vitis vinifera]
          Length = 1085

 Score =  233 bits (593), Expect = 1e-58
 Identities = 128/231 (55%), Positives = 155/231 (67%), Gaps = 2/231 (0%)
 Frame = -2

Query: 1362 DNFDVSPHYPWAPADLHPNLEIAAIVIQVPFEKRECLKDKQVDKLGAKEQKNLFDFSAFD 1183
            D+FD +  YPWAPA+LHP+LEIAAIVIQVPFEKRE LK                      
Sbjct: 858  DDFDAAVPYPWAPANLHPDLEIAAIVIQVPFEKRESLK---------------------- 895

Query: 1182 HRNNDNPSGVSRANVKVVTPTRAHGLPSKKSGGIPSPILERWRSGGCCDCGGWDMACPLH 1003
            +R  +NP     A VKVVT +  HGLPS  S G PS +L+RWR GG CDCGGWDMACPL 
Sbjct: 896  YRRGENP-----AKVKVVTASGNHGLPSGDSRG-PSSLLDRWRLGGGCDCGGWDMACPLI 949

Query: 1002 VFDNCEE-KMKD-RYMGNQQPIELFFQGAKDKLAAVTIKSTGEGQYSVDFHARLSKLQAF 829
            VFDN    +++D   M + QP+ELF QGAK+++ A+TI    EGQY+VDFHA+LS LQAF
Sbjct: 950  VFDNPSILRVEDCPLMESPQPLELFVQGAKERVPALTITRVEEGQYAVDFHAQLSTLQAF 1009

Query: 828  SICVAILHGCEASTAIEQEKNPQTFHCNSLKVLFDEEVKFLIGAAADKDKR 676
            SICVA+LH  EA +    EKN    HCNSLK+L +EEVKFLI A  +++KR
Sbjct: 1010 SICVAMLHSSEAFSTTGDEKNRHLLHCNSLKMLIEEEVKFLIEAVTEEEKR 1060


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