BLASTX nr result

ID: Coptis24_contig00016830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016830
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134836.1| PREDICTED: UPF0548 protein At2g17695-like [C...    60   2e-07
ref|XP_002327717.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|NP_001237163.1| uncharacterized protein LOC100527004 [Glycin...    59   5e-07
ref|XP_003629220.1| hypothetical protein MTR_8g074720 [Medicago ...    56   3e-06
gb|AFX67009.1| hypothetical protein [Solanum tuberosum]                56   3e-06

>ref|XP_004134836.1| PREDICTED: UPF0548 protein At2g17695-like [Cucumis sativus]
           gi|449491283|ref|XP_004158849.1| PREDICTED: UPF0548
           protein At2g17695-like [Cucumis sativus]
          Length = 208

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = +1

Query: 193 MVFLCWKRPSELEQKACIDKCGTFNYDSKYRAATSKSFS 309
           MVFLCW RPS  EQKACI++ G+FNY+SK+R AT+   S
Sbjct: 1   MVFLCWSRPSPQEQKACIERAGSFNYNSKFRGATANPSS 39


>ref|XP_002327717.1| predicted protein [Populus trichocarpa] gi|222836802|gb|EEE75195.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/40 (67%), Positives = 30/40 (75%)
 Frame = +1

Query: 193 MVFLCWKRPSELEQKACIDKCGTFNYDSKYRAATSKSFSS 312
           MVFLCW +PS  EQK C++K   FNYDSKYR ATSK  SS
Sbjct: 1   MVFLCWAKPSLQEQKDCLNKSDGFNYDSKYRGATSKHASS 40


>ref|NP_001237163.1| uncharacterized protein LOC100527004 [Glycine max]
           gi|255631350|gb|ACU16042.1| unknown [Glycine max]
          Length = 207

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/40 (62%), Positives = 31/40 (77%)
 Frame = +1

Query: 193 MVFLCWKRPSELEQKACIDKCGTFNYDSKYRAATSKSFSS 312
           M+FL W RPS  +QK CI+K GTFNYD KY+ AT+KS +S
Sbjct: 1   MLFLSWGRPSPQDQKTCINKSGTFNYDDKYKGATAKSVAS 40


>ref|XP_003629220.1| hypothetical protein MTR_8g074720 [Medicago truncatula]
           gi|355523242|gb|AET03696.1| hypothetical protein
           MTR_8g074720 [Medicago truncatula]
          Length = 232

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/41 (58%), Positives = 31/41 (75%)
 Frame = +1

Query: 190 KMVFLCWKRPSELEQKACIDKCGTFNYDSKYRAATSKSFSS 312
           +MVFL W RP+  +QK CI+K GT NYD KY+ A++KS SS
Sbjct: 23  RMVFLSWVRPTAQDQKNCINKSGTLNYDDKYKGASAKSLSS 63


>gb|AFX67009.1| hypothetical protein [Solanum tuberosum]
          Length = 203

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = +1

Query: 193 MVFLCWKRPSELEQKACIDKCGTFNYDSKYRAATSK 300
           MVFL W RPS  EQKACI+K G+FNYD+++R AT K
Sbjct: 1   MVFLSWTRPSPDEQKACINKSGSFNYDNRFRGATDK 36


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