BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016798
         (987 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotei...   328   9e-88
ref|XP_003554737.1| PREDICTED: U1 small nuclear ribonucleoprotei...   323   3e-86
emb|CBI36876.3| unnamed protein product [Vitis vinifera]              322   9e-86
gb|ACJ84781.1| unknown [Medicago truncatula]                          322   9e-86
gb|ACU24174.1| unknown [Glycine max]                                  322   1e-85

>ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Vitis vinifera]
          Length = 245

 Score =  328 bits (842), Expect = 9e-88
 Identities = 174/238 (73%), Positives = 191/238 (80%), Gaps = 6/238 (2%)
 Frame = +1

Query: 112 DVPPNQTIYINNLNEKVKLDGLKKSLIAVFSQFGKIVDVLAFKTLKHHGQAWVVFDDVTS 291
           ++ PN TIYINNLNEK+KL+ LKKSL AVFSQFGKI++VLAFKTLKH GQAWVVF++V+S
Sbjct: 9   EISPNMTIYINNLNEKIKLEELKKSLFAVFSQFGKIMEVLAFKTLKHKGQAWVVFEEVSS 68

Query: 292 ATNALKQMQGFPFYDKPMRIQYAKTKSDVVAKADNTFVPXXXXXXXXXXXXXXXXXQQHD 471
           ATNAL+QMQGFPFYDKPMRIQYAKTKSDV+AKAD TFVP                 +QHD
Sbjct: 69  ATNALRQMQGFPFYDKPMRIQYAKTKSDVIAKADGTFVP-RERRRRHDDRAGRKRREQHD 127

Query: 472 ANQAGMGLNP-YAGAYGATP---MLPYPGVAKS-VQEAPALPNNILFVQNLPHETNPMML 636
           ANQAG+G+NP Y GAYGA P    +PY G AKS V EAPA PNNILF+QNLPHE  PMML
Sbjct: 128 ANQAGVGVNPAYGGAYGAAPPLSQIPYLGGAKSAVPEAPAPPNNILFIQNLPHEATPMML 187

Query: 637 QMRFTQYEGFKEVRMVEAKPGIAFVEYGNEMQSTQAMHGLQGYMINAQ-PMQITYAKK 807
           QM F QY GFKEVRMVEAKPGIAFVEYG+EMQST AM GLQG  IN Q PM ITYAKK
Sbjct: 188 QMFFCQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGLKINQQNPMLITYAKK 245


>ref|XP_003554737.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Glycine max]
          Length = 241

 Score =  323 bits (829), Expect = 3e-86
 Identities = 168/237 (70%), Positives = 189/237 (79%), Gaps = 3/237 (1%)
 Frame = +1

Query: 106 TDDVPPNQTIYINNLNEKVKLDGLKKSLIAVFSQFGKIVDVLAFKTLKHHGQAWVVFDDV 285
           T ++P N TIYINNLNEK+K+D LKKSL AVF+QFGKI++VLAFKTLKH GQAWVVF+D 
Sbjct: 7   TPEIPQNNTIYINNLNEKIKIDELKKSLNAVFTQFGKILEVLAFKTLKHKGQAWVVFEDA 66

Query: 286 TSATNALKQMQGFPFYDKPMRIQYAKTKSDVVAKADNTFVPXXXXXXXXXXXXXXXXXQQ 465
           +SA+NAL+QMQGFPFYDKPMRIQYAKTKSD++AKAD TFVP                  Q
Sbjct: 67  SSASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVP--REKRKRHDEKAKKRKDQ 124

Query: 466 HDANQAGMGLNP-YAGAYGATPMLPYPGVAKS-VQEAPALPNNILFVQNLPHETNPMMLQ 639
           HD+N AGMGLNP YAGAYGA P + YPG AKS V EAPA PNNILF+QNLP+++ PMMLQ
Sbjct: 125 HDSNLAGMGLNPAYAGAYGAAPAIAYPGGAKSMVPEAPAPPNNILFIQNLPNDSTPMMLQ 184

Query: 640 MRFTQYEGFKEVRMVEAKPGIAFVEYGNEMQSTQAMHGLQGYMINAQ-PMQITYAKK 807
           M F QY GFKEVRMVE KPGIAFVEYG+EMQST AM  LQG+ I  Q PM ITYAKK
Sbjct: 185 MLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQTLQGFKITPQNPMLITYAKK 241


>emb|CBI36876.3| unnamed protein product [Vitis vinifera]
          Length = 232

 Score =  322 bits (825), Expect = 9e-86
 Identities = 172/232 (74%), Positives = 187/232 (80%), Gaps = 6/232 (2%)
 Frame = +1

Query: 130 TIYINNLNEKVKLDGLKKSLIAVFSQFGKIVDVLAFKTLKHHGQAWVVFDDVTSATNALK 309
           TIYINNLNEK+KL+ LKKSL AVFSQFGKI++VLAFKTLKH GQAWVVF++V+SATNAL+
Sbjct: 2   TIYINNLNEKIKLEELKKSLFAVFSQFGKIMEVLAFKTLKHKGQAWVVFEEVSSATNALR 61

Query: 310 QMQGFPFYDKPMRIQYAKTKSDVVAKADNTFVPXXXXXXXXXXXXXXXXXQQHDANQAGM 489
           QMQGFPFYDKPMRIQYAKTKSDV+AKAD TFVP                 +QHDANQAG+
Sbjct: 62  QMQGFPFYDKPMRIQYAKTKSDVIAKADGTFVP-RERRRRHDDRAGRKRREQHDANQAGV 120

Query: 490 GLNP-YAGAYGATP---MLPYPGVAKS-VQEAPALPNNILFVQNLPHETNPMMLQMRFTQ 654
           G+NP Y GAYGA P    +PY G AKS V EAPA PNNILF+QNLPHE  PMMLQM F Q
Sbjct: 121 GVNPAYGGAYGAAPPLSQIPYLGGAKSAVPEAPAPPNNILFIQNLPHEATPMMLQMFFCQ 180

Query: 655 YEGFKEVRMVEAKPGIAFVEYGNEMQSTQAMHGLQGYMINAQ-PMQITYAKK 807
           Y GFKEVRMVEAKPGIAFVEYG+EMQST AM GLQG  IN Q PM ITYAKK
Sbjct: 181 YPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGLKINQQNPMLITYAKK 232


>gb|ACJ84781.1| unknown [Medicago truncatula]
          Length = 245

 Score =  322 bits (825), Expect = 9e-86
 Identities = 172/236 (72%), Positives = 189/236 (80%), Gaps = 6/236 (2%)
 Frame = +1

Query: 118 PPNQTIYINNLNEKVKLDGLKKSLIAVFSQFGKIVDVLAFKTLKHHGQAWVVFDDVTSAT 297
           P N TIYINNLNEK+K+D LKKSL AVFSQFGKI++VLAFKTLKH GQAWV+F+DVTSA+
Sbjct: 11  PQNMTIYINNLNEKIKIDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVTSAS 70

Query: 298 NALKQMQGFPFYDKPMRIQYAKTKSDVVAKADNTFVPXXXXXXXXXXXXXXXXXQQHDAN 477
           NAL+QMQGFPFYDKPMRIQYA+TKSDV+AKA+ TFVP                  Q+DAN
Sbjct: 71  NALRQMQGFPFYDKPMRIQYARTKSDVIAKAEGTFVP-REKRKRHDDKAGKKRKDQNDAN 129

Query: 478 QAGMGLNP-YAGAYGATPML---PYPGVAKS-VQEAPALPNNILFVQNLPHETNPMMLQM 642
            AG GLNP YAGAYGATP L   PYPG AKS + EAPA PNNILF+QNLP+ET PMMLQM
Sbjct: 130 LAGTGLNPAYAGAYGATPALSQIPYPGGAKSLLPEAPAPPNNILFIQNLPNETTPMMLQM 189

Query: 643 RFTQYEGFKEVRMVEAKPGIAFVEYGNEMQSTQAMHGLQGYMINAQ-PMQITYAKK 807
            F QY GFKEVRMVEAKPGIAFVEYG+EMQST AM  LQG+ I  Q PM ITYAKK
Sbjct: 190 LFLQYPGFKEVRMVEAKPGIAFVEYGDEMQSTMAMQALQGFKIAPQNPMLITYAKK 245


>gb|ACU24174.1| unknown [Glycine max]
          Length = 241

 Score =  322 bits (824), Expect = 1e-85
 Identities = 167/237 (70%), Positives = 188/237 (79%), Gaps = 3/237 (1%)
 Frame = +1

Query: 106 TDDVPPNQTIYINNLNEKVKLDGLKKSLIAVFSQFGKIVDVLAFKTLKHHGQAWVVFDDV 285
           T ++P N  IYINNLNEK+K+D LKKSL AVF+QFGKI++VLAFKTLKH GQAWVVF+D 
Sbjct: 7   TPEIPQNNAIYINNLNEKIKIDELKKSLNAVFTQFGKILEVLAFKTLKHKGQAWVVFEDA 66

Query: 286 TSATNALKQMQGFPFYDKPMRIQYAKTKSDVVAKADNTFVPXXXXXXXXXXXXXXXXXQQ 465
           +SA+NAL+QMQGFPFYDKPMRIQYAKTKSD++AKAD TFVP                  Q
Sbjct: 67  SSASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVP--REKRKRHDEKAKKRKDQ 124

Query: 466 HDANQAGMGLNP-YAGAYGATPMLPYPGVAKS-VQEAPALPNNILFVQNLPHETNPMMLQ 639
           HD+N AGMGLNP YAGAYGA P + YPG AKS V EAPA PNNILF+QNLP+++ PMMLQ
Sbjct: 125 HDSNLAGMGLNPAYAGAYGAAPAIAYPGGAKSMVPEAPAPPNNILFIQNLPNDSTPMMLQ 184

Query: 640 MRFTQYEGFKEVRMVEAKPGIAFVEYGNEMQSTQAMHGLQGYMINAQ-PMQITYAKK 807
           M F QY GFKEVRMVE KPGIAFVEYG+EMQST AM  LQG+ I  Q PM ITYAKK
Sbjct: 185 MLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQTLQGFKITPQNPMLITYAKK 241