BLASTX nr result

ID: Coptis24_contig00016761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016761
         (829 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278573.1| PREDICTED: uncharacterized membrane protein ...   238   9e-61
ref|XP_002317329.1| predicted protein [Populus trichocarpa] gi|2...   232   9e-59
ref|XP_003596939.1| Membrane protein, putative [Medicago truncat...   231   1e-58
gb|AFK33902.1| unknown [Medicago truncatula]                          231   1e-58
ref|XP_002529338.1| conserved hypothetical protein [Ricinus comm...   231   1e-58

>ref|XP_002278573.1| PREDICTED: uncharacterized membrane protein yuiD [Vitis vinifera]
           gi|297737478|emb|CBI26679.3| unnamed protein product
           [Vitis vinifera]
          Length = 166

 Score =  238 bits (608), Expect = 9e-61
 Identities = 117/166 (70%), Positives = 143/166 (86%), Gaps = 9/166 (5%)
 Frame = +2

Query: 71  MNEVVTASDVSTTIRSSNQSQ---PSILPLLSAF------QFLKLFTTWYKEKRWDSRRI 223
           M+EV+TA+D S+   S++      P+ LPLLSAF      QFLKLFTTWYKEKRWDSRR+
Sbjct: 1   MDEVITAADASSIAGSTSSGSSIIPNNLPLLSAFLSFALAQFLKLFTTWYKEKRWDSRRM 60

Query: 224 FGSGGMPSSHSATVSALAVAIGFEDGIGGSSFALPIVLAAVVMYDASGVRLHAGRQAELL 403
            GSGGMPSSHSATV+ALAVAIGF++G GGS+FA+ +VLA VVMYDASGVRLHAGRQAELL
Sbjct: 61  LGSGGMPSSHSATVTALAVAIGFQEGTGGSAFAIAVVLACVVMYDASGVRLHAGRQAELL 120

Query: 404 NQIVCEFPPEHPLSSVRPLRELLGHTPLQVIAGAILGCLVSYVMRN 541
           NQIVCE PP+HP+S+VRPLR+ LGHTPLQV+AG++LGC+V+Y+M++
Sbjct: 121 NQIVCELPPDHPVSNVRPLRDSLGHTPLQVVAGSVLGCVVAYLMKS 166


>ref|XP_002317329.1| predicted protein [Populus trichocarpa] gi|222860394|gb|EEE97941.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  232 bits (591), Expect = 9e-59
 Identities = 114/167 (68%), Positives = 141/167 (84%), Gaps = 9/167 (5%)
 Frame = +2

Query: 71  MNEVVTASDVSTTIRSSNQ---SQPSILPLLSAF------QFLKLFTTWYKEKRWDSRRI 223
           M+EV+TA+D S+  RS+     S PS +PLLSAF      QFLKLFTTW+KEKRWD+RR+
Sbjct: 1   MDEVMTAADASSRYRSATSPPASLPSNIPLLSAFLAFSLAQFLKLFTTWFKEKRWDARRM 60

Query: 224 FGSGGMPSSHSATVSALAVAIGFEDGIGGSSFALPIVLAAVVMYDASGVRLHAGRQAELL 403
            GSGGMPSSHSATV+ALA AIG ++G G  +FA+ +VLA VVMYDA+GVRLHAGRQAELL
Sbjct: 61  LGSGGMPSSHSATVTALATAIGLQEGTGAPAFAVALVLACVVMYDATGVRLHAGRQAELL 120

Query: 404 NQIVCEFPPEHPLSSVRPLRELLGHTPLQVIAGAILGCLVSYVMRNS 544
           NQIVCE PPEHP+S+VRPLR+ LGHTPLQV+AGA+LGC+++++MR+S
Sbjct: 121 NQIVCELPPEHPVSNVRPLRDSLGHTPLQVVAGAVLGCIIAFLMRSS 167


>ref|XP_003596939.1| Membrane protein, putative [Medicago truncatula]
           gi|355485987|gb|AES67190.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 167

 Score =  231 bits (589), Expect = 1e-58
 Identities = 114/166 (68%), Positives = 138/166 (83%), Gaps = 8/166 (4%)
 Frame = +2

Query: 71  MNEVVTASDVSTTIRSSNQS--QPSILPLLSAF------QFLKLFTTWYKEKRWDSRRIF 226
           MNEV+T +DV+ +  SS       S LPL+SAF      QFLK+FTTWYKEKRWDS+R+ 
Sbjct: 1   MNEVLTRADVTASTASSLSPFVPSSNLPLISAFLSFALAQFLKIFTTWYKEKRWDSKRLL 60

Query: 227 GSGGMPSSHSATVSALAVAIGFEDGIGGSSFALPIVLAAVVMYDASGVRLHAGRQAELLN 406
            SGGMPSSHSATVSALAVAIGF++GIG S FA+ ++LA +VMYDA+GVRLHAGRQAELLN
Sbjct: 61  DSGGMPSSHSATVSALAVAIGFQEGIGSSVFAIAVILACIVMYDATGVRLHAGRQAELLN 120

Query: 407 QIVCEFPPEHPLSSVRPLRELLGHTPLQVIAGAILGCLVSYVMRNS 544
           QIVCE PPEHPLS+VRPLR+ LGHTPLQV+AG +LGC+++++MR S
Sbjct: 121 QIVCELPPEHPLSNVRPLRDSLGHTPLQVVAGGLLGCIIAFLMRKS 166


>gb|AFK33902.1| unknown [Medicago truncatula]
          Length = 167

 Score =  231 bits (589), Expect = 1e-58
 Identities = 114/166 (68%), Positives = 138/166 (83%), Gaps = 8/166 (4%)
 Frame = +2

Query: 71  MNEVVTASDVSTTIRSSNQS--QPSILPLLSAF------QFLKLFTTWYKEKRWDSRRIF 226
           MNEV+T +DV+ +  SS       S LPL+SAF      QFLK+FTTWYKEKRWDS+R+ 
Sbjct: 1   MNEVLTRADVTASTASSLSPLVPSSNLPLISAFLSFALAQFLKIFTTWYKEKRWDSKRLL 60

Query: 227 GSGGMPSSHSATVSALAVAIGFEDGIGGSSFALPIVLAAVVMYDASGVRLHAGRQAELLN 406
            SGGMPSSHSATVSALAVAIGF++GIG S FA+ ++LA +VMYDA+GVRLHAGRQAELLN
Sbjct: 61  DSGGMPSSHSATVSALAVAIGFQEGIGSSVFAIAVILACIVMYDATGVRLHAGRQAELLN 120

Query: 407 QIVCEFPPEHPLSSVRPLRELLGHTPLQVIAGAILGCLVSYVMRNS 544
           QIVCE PPEHPLS+VRPLR+ LGHTPLQV+AG +LGC+++++MR S
Sbjct: 121 QIVCELPPEHPLSNVRPLRDSLGHTPLQVVAGGLLGCIIAFLMRKS 166


>ref|XP_002529338.1| conserved hypothetical protein [Ricinus communis]
           gi|223531209|gb|EEF33055.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 173

 Score =  231 bits (589), Expect = 1e-58
 Identities = 118/172 (68%), Positives = 141/172 (81%), Gaps = 14/172 (8%)
 Frame = +2

Query: 71  MNEVVTASDV----STTIRSSNQSQ----PSILPLLSAF------QFLKLFTTWYKEKRW 208
           M+EV+T +D      TT  SS+ S     PS LPLLSAF      QFLK+FT WYKE+RW
Sbjct: 1   MDEVMTVADARSAGQTTSSSSSASSFSGLPSNLPLLSAFLSCALAQFLKIFTNWYKERRW 60

Query: 209 DSRRIFGSGGMPSSHSATVSALAVAIGFEDGIGGSSFALPIVLAAVVMYDASGVRLHAGR 388
           DS+++F SGGMPSSHSATV+ALA+AIG ++G G  +FA+  VLA VVMYDA+GVRLHAGR
Sbjct: 61  DSKKMFDSGGMPSSHSATVTALAMAIGLQEGPGSPAFAIAFVLACVVMYDATGVRLHAGR 120

Query: 389 QAELLNQIVCEFPPEHPLSSVRPLRELLGHTPLQVIAGAILGCLVSYVMRNS 544
           QAELLNQIVCEFPPEHPLSSVRPLRELLGHTPLQV+AG++LGC+V+Y+MRN+
Sbjct: 121 QAELLNQIVCEFPPEHPLSSVRPLRELLGHTPLQVVAGSLLGCIVAYLMRNT 172


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