BLASTX nr result

ID: Coptis24_contig00016708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016708
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277229.1| PREDICTED: uncharacterized protein LOC100263...   157   6e-37
ref|XP_002298483.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35
ref|XP_002313988.1| predicted protein [Populus trichocarpa] gi|2...   152   4e-35
ref|XP_003539337.1| PREDICTED: uncharacterized protein LOC100813...   151   6e-35
ref|XP_003615710.1| hypothetical protein MTR_5g071350 [Medicago ...   151   6e-35

>ref|XP_002277229.1| PREDICTED: uncharacterized protein LOC100263882 [Vitis vinifera]
          Length = 392

 Score =  157 bits (398), Expect = 6e-37
 Identities = 68/92 (73%), Positives = 81/92 (88%), Gaps = 1/92 (1%)
 Frame = -3

Query: 284 WIRDDTYPMYQ-SNCSVIDSAFNCQTNGRPDSDYLKYRWQPAGCEVPRFNGLDFLSKMRG 108
           W+RDD YP+YQ S+C  ID+ FNCQ  GRPD+DYLKYRW+P  CE+PRFNGL+FL +M+G
Sbjct: 66  WVRDDAYPLYQFSDCPFIDAEFNCQMYGRPDTDYLKYRWKPTNCELPRFNGLEFLLRMKG 125

Query: 107 KTIMFVGDSLGRNQWQSLVCMISAAVPQSPTQ 12
           KT+MFVGDSLGRNQW+SLVCMIS AVP+SPTQ
Sbjct: 126 KTVMFVGDSLGRNQWESLVCMISTAVPRSPTQ 157


>ref|XP_002298483.1| predicted protein [Populus trichocarpa] gi|222845741|gb|EEE83288.1|
           predicted protein [Populus trichocarpa]
          Length = 339

 Score =  153 bits (386), Expect = 2e-35
 Identities = 66/96 (68%), Positives = 86/96 (89%), Gaps = 2/96 (2%)
 Frame = -3

Query: 284 WIRDDTYPMYQS-NC-SVIDSAFNCQTNGRPDSDYLKYRWQPAGCEVPRFNGLDFLSKMR 111
           W+RD++YP+YQS NC ++ID+ FNCQ  GRPDS+YLKYRWQP  CE+PRFNGL+FL KMR
Sbjct: 16  WVRDESYPLYQSSNCPTIIDAEFNCQMYGRPDSEYLKYRWQPLNCELPRFNGLEFLLKMR 75

Query: 110 GKTIMFVGDSLGRNQWQSLVCMISAAVPQSPTQASK 3
           GK+IMFVGDSLGRNQW+SL+C++S++VP++ TQ S+
Sbjct: 76  GKSIMFVGDSLGRNQWESLICLVSSSVPRTSTQMSR 111


>ref|XP_002313988.1| predicted protein [Populus trichocarpa] gi|222850396|gb|EEE87943.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score =  152 bits (383), Expect = 4e-35
 Identities = 66/96 (68%), Positives = 85/96 (88%), Gaps = 2/96 (2%)
 Frame = -3

Query: 284 WIRDDTYPMYQS-NC-SVIDSAFNCQTNGRPDSDYLKYRWQPAGCEVPRFNGLDFLSKMR 111
           W+RD++YP+YQS NC ++ID+ FNCQ  GRPDSDYLKYRWQP  CE+PRFNGL+FL  MR
Sbjct: 66  WVRDESYPLYQSSNCPTIIDAEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLNMR 125

Query: 110 GKTIMFVGDSLGRNQWQSLVCMISAAVPQSPTQASK 3
           GK++MFVGDSLGRNQW+SL+C+IS++VP++ TQ S+
Sbjct: 126 GKSMMFVGDSLGRNQWESLICLISSSVPRTSTQMSR 161


>ref|XP_003539337.1| PREDICTED: uncharacterized protein LOC100813612 [Glycine max]
          Length = 388

 Score =  151 bits (381), Expect = 6e-35
 Identities = 64/92 (69%), Positives = 81/92 (88%), Gaps = 1/92 (1%)
 Frame = -3

Query: 284 WIRDDTYPMYQS-NCSVIDSAFNCQTNGRPDSDYLKYRWQPAGCEVPRFNGLDFLSKMRG 108
           W++DD+YP+YQS NC +ID  FNC+  GRPDSDYL+YRW+P  C++PRFNG++FL +M+G
Sbjct: 58  WVQDDSYPIYQSSNCPIIDPQFNCKMFGRPDSDYLRYRWRPLNCDLPRFNGVEFLLQMKG 117

Query: 107 KTIMFVGDSLGRNQWQSLVCMISAAVPQSPTQ 12
           KT+MFVGDSLGRNQWQSL+CMI AAVPQ+ TQ
Sbjct: 118 KTVMFVGDSLGRNQWQSLICMIYAAVPQTQTQ 149


>ref|XP_003615710.1| hypothetical protein MTR_5g071350 [Medicago truncatula]
           gi|355517045|gb|AES98668.1| hypothetical protein
           MTR_5g071350 [Medicago truncatula]
          Length = 401

 Score =  151 bits (381), Expect = 6e-35
 Identities = 65/92 (70%), Positives = 78/92 (84%), Gaps = 1/92 (1%)
 Frame = -3

Query: 284 WIRDDTYPMYQSN-CSVIDSAFNCQTNGRPDSDYLKYRWQPAGCEVPRFNGLDFLSKMRG 108
           W+ D++YP YQS+ C +ID  FNCQ NGRPDSDYLKYRW+P  CE+PRFNG++FL KM+G
Sbjct: 65  WVFDESYPFYQSSSCEIIDPEFNCQMNGRPDSDYLKYRWKPLNCELPRFNGVEFLLKMKG 124

Query: 107 KTIMFVGDSLGRNQWQSLVCMISAAVPQSPTQ 12
           K++MFVGDSLGRNQWQSL+CMISAA P   TQ
Sbjct: 125 KSVMFVGDSLGRNQWQSLICMISAAAPNVETQ 156


Top