BLASTX nr result

ID: Coptis24_contig00016617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016617
         (1366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272420.1| PREDICTED: WUSCHEL-related homeobox 8 [Vitis...   371   e-100
emb|CAN84082.1| hypothetical protein VITISV_018997 [Vitis vinifera]   360   6e-97
ref|XP_002279942.1| PREDICTED: WUSCHEL-related homeobox 13-like ...   335   2e-89
ref|XP_002272863.1| PREDICTED: WUSCHEL-related homeobox 13-like ...   333   8e-89
emb|CBI37641.3| unnamed protein product [Vitis vinifera]              329   1e-87

>ref|XP_002272420.1| PREDICTED: WUSCHEL-related homeobox 8 [Vitis vinifera]
           gi|297745565|emb|CBI40730.3| unnamed protein product
           [Vitis vinifera]
          Length = 279

 Score =  371 bits (953), Expect = e-100
 Identities = 183/247 (74%), Positives = 210/247 (85%), Gaps = 1/247 (0%)
 Frame = +2

Query: 257 GMMYVKVMTDEQMELLRKQISIYATICEQLVEMHKSITSQQDFAGMRLGNVYYDPLTTSA 436
           G +YVKVMTDEQMELLR+QIS+YATICEQLVEMHK+IT+QQD AGMRLGN+Y DPL  SA
Sbjct: 30  GGLYVKVMTDEQMELLRRQISVYATICEQLVEMHKAITTQQDLAGMRLGNIYCDPLMASA 89

Query: 437 GHKISTRQRWTPTPMQLQILEHIFDQGTGTPSKQKIKDITNELTQHGPISETNVYNWFQN 616
           GHKIS+RQRWTPTP+QLQILE IFDQG GTPSKQKIK+IT ELTQHG ISETNVYNWFQN
Sbjct: 90  GHKISSRQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITTELTQHGQISETNVYNWFQN 149

Query: 617 RRARSKRKQTGVGPNNAESEVETEVESPKEKKAKPENILSNENHALGENEVCFQSSEIGS 796
           RRARSKRKQ+   PNNA+SEVET+VESPKEKK KP+NI S+EN ALG   + FQS E+GS
Sbjct: 150 RRARSKRKQSVPLPNNADSEVETDVESPKEKKTKPDNIQSHENSALGTENIYFQSPEMGS 209

Query: 797 ELHSLDQQHEKGENTFPSDGCPRSSGSLGHISFYDTLLSNPRIDHLLGKMEVPGSYNGYH 976
           E+H LD Q  KGE  FPSD   RSSGSLGH S Y+T + NPR+D L+GK+EVPGS++ Y 
Sbjct: 210 EMHCLDTQPNKGEPMFPSDRSLRSSGSLGHSSLYETGVPNPRMDQLIGKVEVPGSFSPYR 269

Query: 977 Q-GDGYE 994
           Q G+G++
Sbjct: 270 QGGEGFD 276


>emb|CAN84082.1| hypothetical protein VITISV_018997 [Vitis vinifera]
          Length = 243

 Score =  360 bits (923), Expect = 6e-97
 Identities = 177/240 (73%), Positives = 203/240 (84%), Gaps = 1/240 (0%)
 Frame = +2

Query: 278 MTDEQMELLRKQISIYATICEQLVEMHKSITSQQDFAGMRLGNVYYDPLTTSAGHKISTR 457
           MTDEQMELLR+QIS+YATICEQLVEMHK+IT+QQD AGMRLGN+Y DPL  SAGHKIS+R
Sbjct: 1   MTDEQMELLRRQISVYATICEQLVEMHKAITTQQDLAGMRLGNIYCDPLMASAGHKISSR 60

Query: 458 QRWTPTPMQLQILEHIFDQGTGTPSKQKIKDITNELTQHGPISETNVYNWFQNRRARSKR 637
           QRWTPTP+QLQILE IFDQG GTPSKQKIK+IT ELTQHG ISETNVYNWFQNRRARSKR
Sbjct: 61  QRWTPTPVQLQILERIFDQGNGTPSKQKIKEITTELTQHGQISETNVYNWFQNRRARSKR 120

Query: 638 KQTGVGPNNAESEVETEVESPKEKKAKPENILSNENHALGENEVCFQSSEIGSELHSLDQ 817
           KQ+   PNNA+SEVET+VESPKEKK KP+NI S+EN ALG   + FQS E+GSE+H LD 
Sbjct: 121 KQSVPLPNNADSEVETDVESPKEKKTKPDNIQSHENSALGTENIYFQSPEMGSEMHCLDT 180

Query: 818 QHEKGENTFPSDGCPRSSGSLGHISFYDTLLSNPRIDHLLGKMEVPGSYNGYHQ-GDGYE 994
           Q  KGE  FPSD   RSSGSLGH S Y+  + NPR+D L+GK+EVPGS++ Y Q G+G++
Sbjct: 181 QPNKGEPMFPSDHSLRSSGSLGHSSLYEAGVPNPRMDQLIGKVEVPGSFSPYRQGGEGFD 240


>ref|XP_002279942.1| PREDICTED: WUSCHEL-related homeobox 13-like isoform 1 [Vitis
           vinifera]
          Length = 281

 Score =  335 bits (859), Expect = 2e-89
 Identities = 166/245 (67%), Positives = 193/245 (78%)
 Frame = +2

Query: 257 GMMYVKVMTDEQMELLRKQISIYATICEQLVEMHKSITSQQDFAGMRLGNVYYDPLTTSA 436
           G++Y+KVMTD QME+LRKQIS+YATICEQLVEMHKS+TS QD AG+RLGN+Y DPL TS 
Sbjct: 39  GVLYMKVMTDAQMEILRKQISVYATICEQLVEMHKSLTSHQDLAGVRLGNLYCDPLMTST 98

Query: 437 GHKISTRQRWTPTPMQLQILEHIFDQGTGTPSKQKIKDITNELTQHGPISETNVYNWFQN 616
           GHKI+ RQRWTPTP+QLQILE IFDQG GTPSKQKIK+IT++L+QHG ISETNVYNWFQN
Sbjct: 99  GHKITARQRWTPTPVQLQILERIFDQGYGTPSKQKIKEITSDLSQHGQISETNVYNWFQN 158

Query: 617 RRARSKRKQTGVGPNNAESEVETEVESPKEKKAKPENILSNENHALGENEVCFQSSEIGS 796
           RRARSKRKQ    PNNA+SEVETEVESPK+KK K EN L  +N A    ++CFQ+ E+GS
Sbjct: 159 RRARSKRKQLVTAPNNADSEVETEVESPKDKKTKSENFLPQQNSASRPEDLCFQNPELGS 218

Query: 797 ELHSLDQQHEKGENTFPSDGCPRSSGSLGHISFYDTLLSNPRIDHLLGKMEVPGSYNGYH 976
            L  LDQQ  K E  FPSDG  + SG+L  ++FY         DH +GKMEVPGSYN Y 
Sbjct: 219 RLDFLDQQTHKEEAIFPSDGGIKPSGNLSPVAFY------AGNDHQIGKMEVPGSYNPYQ 272

Query: 977 QGDGY 991
           Q + Y
Sbjct: 273 QTEDY 277


>ref|XP_002272863.1| PREDICTED: WUSCHEL-related homeobox 13-like [Vitis vinifera]
          Length = 276

 Score =  333 bits (853), Expect = 8e-89
 Identities = 166/245 (67%), Positives = 191/245 (77%)
 Frame = +2

Query: 257 GMMYVKVMTDEQMELLRKQISIYATICEQLVEMHKSITSQQDFAGMRLGNVYYDPLTTSA 436
           G+ YVKVMTD Q+E+LRKQIS+YATICEQLVEMHKS+TS QD AG+RLGN+Y DPL TS 
Sbjct: 34  GVFYVKVMTDAQVEILRKQISVYATICEQLVEMHKSLTSHQDLAGVRLGNLYCDPLMTST 93

Query: 437 GHKISTRQRWTPTPMQLQILEHIFDQGTGTPSKQKIKDITNELTQHGPISETNVYNWFQN 616
           GHKIS RQRWTPTP+QLQILE IFDQG GTPSKQKIK+IT++L+QHG ISETNVYNWFQN
Sbjct: 94  GHKISARQRWTPTPVQLQILERIFDQGYGTPSKQKIKEITSDLSQHGQISETNVYNWFQN 153

Query: 617 RRARSKRKQTGVGPNNAESEVETEVESPKEKKAKPENILSNENHALGENEVCFQSSEIGS 796
           RRA+SKRKQ    PNNAESEV TEVESPK++K K EN L  +N A    ++CFQ+ EIGS
Sbjct: 154 RRAQSKRKQLITMPNNAESEVATEVESPKDQKTKSENFLPQQNSASRPEDLCFQNPEIGS 213

Query: 797 ELHSLDQQHEKGENTFPSDGCPRSSGSLGHISFYDTLLSNPRIDHLLGKMEVPGSYNGYH 976
            LH LDQQ  K EN FPSDG  + SG+   ++FY         DH +GKMEVPGSYN Y 
Sbjct: 214 RLHFLDQQTHKEENIFPSDGGIKPSGNPSQVAFY------AGNDHQIGKMEVPGSYNPYQ 267

Query: 977 QGDGY 991
             + Y
Sbjct: 268 HTEDY 272


>emb|CBI37641.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score =  329 bits (843), Expect = 1e-87
 Identities = 164/241 (68%), Positives = 189/241 (78%)
 Frame = +2

Query: 269 VKVMTDEQMELLRKQISIYATICEQLVEMHKSITSQQDFAGMRLGNVYYDPLTTSAGHKI 448
           +KVMTD QME+LRKQIS+YATICEQLVEMHKS+TS QD AG+RLGN+Y DPL TS GHKI
Sbjct: 1   MKVMTDAQMEILRKQISVYATICEQLVEMHKSLTSHQDLAGVRLGNLYCDPLMTSTGHKI 60

Query: 449 STRQRWTPTPMQLQILEHIFDQGTGTPSKQKIKDITNELTQHGPISETNVYNWFQNRRAR 628
           + RQRWTPTP+QLQILE IFDQG GTPSKQKIK+IT++L+QHG ISETNVYNWFQNRRAR
Sbjct: 61  TARQRWTPTPVQLQILERIFDQGYGTPSKQKIKEITSDLSQHGQISETNVYNWFQNRRAR 120

Query: 629 SKRKQTGVGPNNAESEVETEVESPKEKKAKPENILSNENHALGENEVCFQSSEIGSELHS 808
           SKRKQ    PNNA+SEVETEVESPK+KK K EN L  +N A    ++CFQ+ E+GS L  
Sbjct: 121 SKRKQLVTAPNNADSEVETEVESPKDKKTKSENFLPQQNSASRPEDLCFQNPELGSRLDF 180

Query: 809 LDQQHEKGENTFPSDGCPRSSGSLGHISFYDTLLSNPRIDHLLGKMEVPGSYNGYHQGDG 988
           LDQQ  K E  FPSDG  + SG+L  ++FY         DH +GKMEVPGSYN Y Q + 
Sbjct: 181 LDQQTHKEEAIFPSDGGIKPSGNLSPVAFY------AGNDHQIGKMEVPGSYNPYQQTED 234

Query: 989 Y 991
           Y
Sbjct: 235 Y 235


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