BLASTX nr result
ID: Coptis24_contig00016614
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00016614 (451 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004136372.1| PREDICTED: protein FAM206A-like [Cucumis sat... 55 6e-06 ref|XP_002300690.1| predicted protein [Populus trichocarpa] gi|2... 55 6e-06 ref|XP_002510586.1| protein with unknown function [Ricinus commu... 55 8e-06 >ref|XP_004136372.1| PREDICTED: protein FAM206A-like [Cucumis sativus] gi|449511231|ref|XP_004163899.1| PREDICTED: protein FAM206A-like [Cucumis sativus] Length = 223 Score = 55.1 bits (131), Expect = 6e-06 Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 4/56 (7%) Frame = +1 Query: 295 PMDDGHTNTKTASP----HQQEEEDEELHSLLVPNIDDLPVTPPSATDSNFVTYFA 450 P + H + A P Q++E+DEEL LL P++ DLP+ PPSA ++NFV+YFA Sbjct: 23 PPLENHELQQLAEPLPKSFQEDEQDEELRKLLTPDVRDLPLVPPSAVETNFVSYFA 78 >ref|XP_002300690.1| predicted protein [Populus trichocarpa] gi|222842416|gb|EEE79963.1| predicted protein [Populus trichocarpa] Length = 205 Score = 55.1 bits (131), Expect = 6e-06 Identities = 26/46 (56%), Positives = 35/46 (76%), Gaps = 1/46 (2%) Frame = +1 Query: 316 NTKTASPHQQ-EEEDEELHSLLVPNIDDLPVTPPSATDSNFVTYFA 450 N T + Q+ +EE+EELH LL+P+I DLP TPPS+ +NFV+YFA Sbjct: 15 NNPTQNLDQELKEEEEELHKLLLPDIRDLPTTPPSSVQTNFVSYFA 60 >ref|XP_002510586.1| protein with unknown function [Ricinus communis] gi|223551287|gb|EEF52773.1| protein with unknown function [Ricinus communis] Length = 282 Score = 54.7 bits (130), Expect = 8e-06 Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 6/65 (9%) Frame = +1 Query: 274 SLSVLDNPMDDGHTNTKTASPHQQEEE------DEELHSLLVPNIDDLPVTPPSATDSNF 435 +++V DNP + S QE E DE+LH LL+P++ +LP+ PPS+ ++NF Sbjct: 66 TITVQDNPTHKQEQKQEKQSKQVQEAEEEDQVTDEDLHKLLLPDVSNLPIVPPSSIETNF 125 Query: 436 VTYFA 450 V+YFA Sbjct: 126 VSYFA 130