BLASTX nr result

ID: Coptis24_contig00016614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016614
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136372.1| PREDICTED: protein FAM206A-like [Cucumis sat...    55   6e-06
ref|XP_002300690.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06
ref|XP_002510586.1| protein with unknown function [Ricinus commu...    55   8e-06

>ref|XP_004136372.1| PREDICTED: protein FAM206A-like [Cucumis sativus]
           gi|449511231|ref|XP_004163899.1| PREDICTED: protein
           FAM206A-like [Cucumis sativus]
          Length = 223

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 4/56 (7%)
 Frame = +1

Query: 295 PMDDGHTNTKTASP----HQQEEEDEELHSLLVPNIDDLPVTPPSATDSNFVTYFA 450
           P  + H   + A P     Q++E+DEEL  LL P++ DLP+ PPSA ++NFV+YFA
Sbjct: 23  PPLENHELQQLAEPLPKSFQEDEQDEELRKLLTPDVRDLPLVPPSAVETNFVSYFA 78


>ref|XP_002300690.1| predicted protein [Populus trichocarpa] gi|222842416|gb|EEE79963.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/46 (56%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
 Frame = +1

Query: 316 NTKTASPHQQ-EEEDEELHSLLVPNIDDLPVTPPSATDSNFVTYFA 450
           N  T +  Q+ +EE+EELH LL+P+I DLP TPPS+  +NFV+YFA
Sbjct: 15  NNPTQNLDQELKEEEEELHKLLLPDIRDLPTTPPSSVQTNFVSYFA 60


>ref|XP_002510586.1| protein with unknown function [Ricinus communis]
           gi|223551287|gb|EEF52773.1| protein with unknown
           function [Ricinus communis]
          Length = 282

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 6/65 (9%)
 Frame = +1

Query: 274 SLSVLDNPMDDGHTNTKTASPHQQEEE------DEELHSLLVPNIDDLPVTPPSATDSNF 435
           +++V DNP        +  S   QE E      DE+LH LL+P++ +LP+ PPS+ ++NF
Sbjct: 66  TITVQDNPTHKQEQKQEKQSKQVQEAEEEDQVTDEDLHKLLLPDVSNLPIVPPSSIETNF 125

Query: 436 VTYFA 450
           V+YFA
Sbjct: 126 VSYFA 130


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