BLASTX nr result

ID: Coptis24_contig00016585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016585
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN59925.1| hypothetical protein VITISV_043883 [Vitis vinifera]   106   2e-21
emb|CBI28534.3| unnamed protein product [Vitis vinifera]               97   1e-18
ref|XP_003517713.1| PREDICTED: uncharacterized protein LOC100798...    93   3e-17
ref|XP_003520016.1| PREDICTED: uncharacterized protein LOC100779...    91   8e-17
ref|XP_003613224.1| hypothetical protein MTR_5g034200 [Medicago ...    89   5e-16

>emb|CAN59925.1| hypothetical protein VITISV_043883 [Vitis vinifera]
          Length = 119

 Score =  106 bits (265), Expect = 2e-21
 Identities = 54/90 (60%), Positives = 62/90 (68%), Gaps = 3/90 (3%)
 Frame = -2

Query: 261 MSLP---PPVIYPNTVTTQPSSHSKGSFGPVFIILAVIIVLSAFACCLGQLCARRLSHSK 91
           MSLP   PPVIYPNTVT QP SHS GSFG VFI+L VI+V+SA AC LG+LC RR  H  
Sbjct: 1   MSLPQQQPPVIYPNTVTRQPPSHSNGSFGTVFIVLGVIVVISAIACVLGRLCNRRRHHHP 60

Query: 90  PKRDHQNSRPKDGDLEFGFKQRIPMEKPIG 1
             + +   RPK+ DLEFGF +  P  KP G
Sbjct: 61  NPKQNSAFRPKEPDLEFGFDKGRPTAKPAG 90


>emb|CBI28534.3| unnamed protein product [Vitis vinifera]
          Length = 107

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 50/84 (59%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
 Frame = -2

Query: 261 MSLP---PPVIYPNTVTTQPSSHSKGSFGPVFIILAVIIVLSAFACCLGQLCARRLSHSK 91
           MSLP   PPVIYPNTVT QP SHS GSFG VFI+L VI+V+SA AC LG+LC RR  H  
Sbjct: 1   MSLPQQQPPVIYPNTVTRQPPSHSNGSFGTVFIVLGVIVVISAIACVLGRLCNRRRHHHP 60

Query: 90  PKRDHQNSRPKDGDLEFGFKQRIP 19
             + +   RPK+ DLEF   Q  P
Sbjct: 61  NPKQNSAFRPKEPDLEFVIFQNYP 84


>ref|XP_003517713.1| PREDICTED: uncharacterized protein LOC100798784 [Glycine max]
          Length = 149

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 49/96 (51%), Positives = 63/96 (65%), Gaps = 13/96 (13%)
 Frame = -2

Query: 249 PPVIYPNTVTTQ-PSSHSKGSFGPVFIILAVIIVLSAFACCLGQLCARRLSHS------K 91
           P  +YP +VT + P  HS GSFG VF++LA+IIV+SA ACCLG+LC RR  HS      K
Sbjct: 21  PVQVYPTSVTYESPPHHSNGSFGSVFVVLAIIIVISAVACCLGRLCNRRGGHSHNQKHVK 80

Query: 90  PKR------DHQNSRPKDGDLEFGFKQRIPMEKPIG 1
           P++      +H N RPK+ D+EFGF +RI   KP G
Sbjct: 81  PQKKQQQQQNHHNFRPKEVDIEFGFDKRIAASKPNG 116


>ref|XP_003520016.1| PREDICTED: uncharacterized protein LOC100779866 [Glycine max]
          Length = 151

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 48/96 (50%), Positives = 62/96 (64%), Gaps = 13/96 (13%)
 Frame = -2

Query: 249 PPVIYPNTVTTQ-PSSHSKGSFGPVFIILAVIIVLSAFACCLGQLCARR-------LSHS 94
           P  +YP +VT + P  HS GSFG VF++LA+IIV+SA ACCLG+LC RR         H 
Sbjct: 21  PVQVYPTSVTYESPPHHSNGSFGSVFVVLAIIIVISAVACCLGRLCNRRGHSHGHNQKHV 80

Query: 93  KPKR-----DHQNSRPKDGDLEFGFKQRIPMEKPIG 1
           KP++     +H N RPK+ D+EFGF +RI   KP G
Sbjct: 81  KPQKQQQQQNHHNFRPKEVDIEFGFDKRIAASKPNG 116


>ref|XP_003613224.1| hypothetical protein MTR_5g034200 [Medicago truncatula]
           gi|355514559|gb|AES96182.1| hypothetical protein
           MTR_5g034200 [Medicago truncatula]
           gi|388520363|gb|AFK48243.1| unknown [Medicago
           truncatula]
          Length = 168

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 50/97 (51%), Positives = 66/97 (68%), Gaps = 15/97 (15%)
 Frame = -2

Query: 249 PPVIYPNTVTTQ-----PSSHSK-GSFGPVFIILAVIIVLSAFACCLGQLCARR---LSH 97
           P  +YP TVT Q     P  HS  GSFG VF++LA+IIV+SA ACCLG+ C+RR    SH
Sbjct: 16  PVQVYPTTVTYQYAPPEPDHHSSNGSFGSVFVVLAIIIVISAVACCLGRFCSRRGNGKSH 75

Query: 96  S-KP-----KRDHQNSRPKDGDLEFGFKQRIPMEKPI 4
           S KP     +++HQ+SRPK+ D+EFGF ++I   KP+
Sbjct: 76  SQKPVKHQKQQNHQHSRPKEVDIEFGFDKKIAASKPM 112


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