BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016578
         (1117 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152101.1| PREDICTED: 15-cis-zeta-carotene isomerase, c...   404   e-110
ref|XP_002267391.1| PREDICTED: 15-cis-zeta-carotene isomerase, c...   394   e-107
emb|CBI39443.3| unnamed protein product [Vitis vinifera]              391   e-106
ref|XP_002519613.1| conserved hypothetical protein [Ricinus comm...   390   e-106
ref|XP_003553105.1| PREDICTED: uncharacterized protein LOC100820...   387   e-105

>ref|XP_004152101.1| PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic-like
            [Cucumis sativus] gi|449521697|ref|XP_004167866.1|
            PREDICTED: 15-cis-zeta-carotene isomerase,
            chloroplastic-like [Cucumis sativus]
          Length = 372

 Score =  404 bits (1037), Expect = e-110
 Identities = 204/296 (68%), Positives = 244/296 (82%), Gaps = 4/296 (1%)
 Frame = +3

Query: 240  RSNFLSFHKPFK----NPVFKTPLNRNINKPFKFQRVLSRILARTSLEETEGKSSVVVDE 407
            R + +SF +PF     N + + PL+ N    F+  R+++   A     E+ G +SV  DE
Sbjct: 24   RPDAISF-RPFSISTPNCLQQLPLSLNSFHIFRRPRLVAE--ASIGDRESGGSTSVSDDE 80

Query: 408  FQLGEDSAFFDIFQQKVSSWVYFTGILGVVLFALDALWIDSSFGFGWGKAFIDSLSGISD 587
              +GED+A FD+ +QK++SWVYFT ILGVVLF L+ +WID+S G G GKAF+D++SGISD
Sbjct: 81   GFVGEDAAAFDLSEQKLTSWVYFTVILGVVLFVLNVVWIDNSAG-GVGKAFLDAVSGISD 139

Query: 588  SHEIVMLILVFIFAAVHSGMASLRDPGEKLIGARAYRVLFAGISLPLAVSTVVYFINHRY 767
            SHE+VML+L+FIFA VHSG+ASLRD GEKL+G RA+RVLFAG+SLPLAVSTVVYFINHRY
Sbjct: 140  SHEVVMLLLIFIFAIVHSGLASLRDQGEKLVGERAFRVLFAGVSLPLAVSTVVYFINHRY 199

Query: 768  DGVQLWQLQSVPWLHEVFWISNFISFLFLYPSTFNLLEVAAVDEPKMHLWETGIMRITRH 947
            DGVQLWQLQSVP LH++ W+S+F+SF+FLYPSTFNLLEVAAVD+PKMHLWETGI+RITRH
Sbjct: 200  DGVQLWQLQSVPLLHQLVWLSSFVSFIFLYPSTFNLLEVAAVDKPKMHLWETGIIRITRH 259

Query: 948  PQMVGQVIWCLAHAMWIGNSVAVAASFGLIGHHLFGVWNGDRRLGLRYGEAFEVVK 1115
            PQMVGQVIWCLAH +WIGNSVAVAAS GLIGHHLFGVWNGDRRL  RYG  FE VK
Sbjct: 260  PQMVGQVIWCLAHTIWIGNSVAVAASIGLIGHHLFGVWNGDRRLAKRYGADFEAVK 315


>ref|XP_002267391.1| PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic-like [Vitis
            vinifera]
          Length = 365

 Score =  394 bits (1012), Expect = e-107
 Identities = 192/261 (73%), Positives = 222/261 (85%)
 Frame = +3

Query: 333  RVLSRILARTSLEETEGKSSVVVDEFQLGEDSAFFDIFQQKVSSWVYFTGILGVVLFALD 512
            R   +I+A TS+ ETE +    V+   +GEDSA FD+ QQK+SSW+YF GILGVVLF LD
Sbjct: 53   RFCHKIMAGTSIGETEEEG---VEPVTVGEDSAAFDLGQQKISSWIYFGGILGVVLFLLD 109

Query: 513  ALWIDSSFGFGWGKAFIDSLSGISDSHEIVMLILVFIFAAVHSGMASLRDPGEKLIGARA 692
             +WID+S GFG  K FI +++G+S+SHE+VMLIL  IFA  HSG+ASLRD GEKLIG RA
Sbjct: 110  VVWIDNSTGFG--KDFIAAVAGVSESHEVVMLILTLIFAIGHSGLASLRDSGEKLIGERA 167

Query: 693  YRVLFAGISLPLAVSTVVYFINHRYDGVQLWQLQSVPWLHEVFWISNFISFLFLYPSTFN 872
            +RVLFAG SLPLAVSTVVYFINHRYDG+QLWQLQSVP +H++ W S+F+SF FLYPSTFN
Sbjct: 168  FRVLFAGTSLPLAVSTVVYFINHRYDGLQLWQLQSVPGIHQLVWFSSFVSFFFLYPSTFN 227

Query: 873  LLEVAAVDEPKMHLWETGIMRITRHPQMVGQVIWCLAHAMWIGNSVAVAASFGLIGHHLF 1052
            LLEVAAVD+PKMHLWETGIMRITRHPQMVGQVIWC+AH +WIGNSVAVAAS GLIGHHLF
Sbjct: 228  LLEVAAVDKPKMHLWETGIMRITRHPQMVGQVIWCIAHTVWIGNSVAVAASIGLIGHHLF 287

Query: 1053 GVWNGDRRLGLRYGEAFEVVK 1115
            GVWNGDRRL  RYGEAF+ V+
Sbjct: 288  GVWNGDRRLASRYGEAFDTVQ 308


>emb|CBI39443.3| unnamed protein product [Vitis vinifera]
          Length = 307

 Score =  391 bits (1004), Expect = e-106
 Identities = 190/255 (74%), Positives = 219/255 (85%)
 Frame = +3

Query: 351  LARTSLEETEGKSSVVVDEFQLGEDSAFFDIFQQKVSSWVYFTGILGVVLFALDALWIDS 530
            +A TS+ ETE +    V+   +GEDSA FD+ QQK+SSW+YF GILGVVLF LD +WID+
Sbjct: 1    MAGTSIGETEEEG---VEPVTVGEDSAAFDLGQQKISSWIYFGGILGVVLFLLDVVWIDN 57

Query: 531  SFGFGWGKAFIDSLSGISDSHEIVMLILVFIFAAVHSGMASLRDPGEKLIGARAYRVLFA 710
            S GFG  K FI +++G+S+SHE+VMLIL  IFA  HSG+ASLRD GEKLIG RA+RVLFA
Sbjct: 58   STGFG--KDFIAAVAGVSESHEVVMLILTLIFAIGHSGLASLRDSGEKLIGERAFRVLFA 115

Query: 711  GISLPLAVSTVVYFINHRYDGVQLWQLQSVPWLHEVFWISNFISFLFLYPSTFNLLEVAA 890
            G SLPLAVSTVVYFINHRYDG+QLWQLQSVP +H++ W S+F+SF FLYPSTFNLLEVAA
Sbjct: 116  GTSLPLAVSTVVYFINHRYDGLQLWQLQSVPGIHQLVWFSSFVSFFFLYPSTFNLLEVAA 175

Query: 891  VDEPKMHLWETGIMRITRHPQMVGQVIWCLAHAMWIGNSVAVAASFGLIGHHLFGVWNGD 1070
            VD+PKMHLWETGIMRITRHPQMVGQVIWC+AH +WIGNSVAVAAS GLIGHHLFGVWNGD
Sbjct: 176  VDKPKMHLWETGIMRITRHPQMVGQVIWCIAHTVWIGNSVAVAASIGLIGHHLFGVWNGD 235

Query: 1071 RRLGLRYGEAFEVVK 1115
            RRL  RYGEAF+ V+
Sbjct: 236  RRLASRYGEAFDTVQ 250


>ref|XP_002519613.1| conserved hypothetical protein [Ricinus communis]
            gi|223541203|gb|EEF42758.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 384

 Score =  390 bits (1001), Expect = e-106
 Identities = 191/260 (73%), Positives = 222/260 (85%), Gaps = 2/260 (0%)
 Frame = +3

Query: 342  SRIL-ARTSLEETE-GKSSVVVDEFQLGEDSAFFDIFQQKVSSWVYFTGILGVVLFALDA 515
            SRI+  +TS+ + +   SS V +E  +GEDSA F++ +QK+SSW+YF+ ILGV L+ LD 
Sbjct: 58   SRIIRTQTSIRDADTSSSSSVSEETVVGEDSAAFELGKQKMSSWIYFSVILGVALYVLDV 117

Query: 516  LWIDSSFGFGWGKAFIDSLSGISDSHEIVMLILVFIFAAVHSGMASLRDPGEKLIGARAY 695
             WID+S GFG  K+FI S+S +S+SHE VMLIL+FIFA VHSG+ASLRD GE+LIG RAY
Sbjct: 118  AWIDNSTGFG--KSFIQSVSTLSESHEAVMLILIFIFATVHSGLASLRDKGEELIGERAY 175

Query: 696  RVLFAGISLPLAVSTVVYFINHRYDGVQLWQLQSVPWLHEVFWISNFISFLFLYPSTFNL 875
            RVLFAG+SLPLA+STVVYFINHRYDGVQLWQLQS P +H++ W+ NFISF FLYPSTFNL
Sbjct: 176  RVLFAGVSLPLAMSTVVYFINHRYDGVQLWQLQSAPAVHQLVWLFNFISFFFLYPSTFNL 235

Query: 876  LEVAAVDEPKMHLWETGIMRITRHPQMVGQVIWCLAHAMWIGNSVAVAASFGLIGHHLFG 1055
            LEVAAVD+PKMHLWETGIMRITRHPQMVGQVIWCLAH +WIGNSVA  AS GL+GHHLFG
Sbjct: 236  LEVAAVDKPKMHLWETGIMRITRHPQMVGQVIWCLAHTIWIGNSVAAVASIGLVGHHLFG 295

Query: 1056 VWNGDRRLGLRYGEAFEVVK 1115
            VWNGDRRL  RYGEAFEVVK
Sbjct: 296  VWNGDRRLAKRYGEAFEVVK 315


>ref|XP_003553105.1| PREDICTED: uncharacterized protein LOC100820507 [Glycine max]
          Length = 374

 Score =  387 bits (995), Expect = e-105
 Identities = 186/257 (72%), Positives = 218/257 (84%)
 Frame = +3

Query: 345  RILARTSLEETEGKSSVVVDEFQLGEDSAFFDIFQQKVSSWVYFTGILGVVLFALDALWI 524
            + +ARTS+ E E +S    D   +GEDSA F++ +QK+SSW+YFT ILGVVL  L+  WI
Sbjct: 63   KFVARTSIGENESESESEKDLGLVGEDSAAFELGKQKISSWIYFTAILGVVLCVLNVAWI 122

Query: 525  DSSFGFGWGKAFIDSLSGISDSHEIVMLILVFIFAAVHSGMASLRDPGEKLIGARAYRVL 704
            D+S G+G  KAFID++S +SDSHE+VMLIL+ IFA VHSG+AS R+ GEKLIG R +RV+
Sbjct: 123  DNSTGYG--KAFIDAVSTLSDSHEVVMLILILIFAGVHSGLASFRNTGEKLIGERPFRVI 180

Query: 705  FAGISLPLAVSTVVYFINHRYDGVQLWQLQSVPWLHEVFWISNFISFLFLYPSTFNLLEV 884
            FAGISLPLAVSTVVYFINHRYDG+QLW LQ  P LH++ W+SNFISF FLYPSTFNLLEV
Sbjct: 181  FAGISLPLAVSTVVYFINHRYDGLQLWLLQDAPGLHQLLWLSNFISFFFLYPSTFNLLEV 240

Query: 885  AAVDEPKMHLWETGIMRITRHPQMVGQVIWCLAHAMWIGNSVAVAASFGLIGHHLFGVWN 1064
            AAVD+PK+HLWETGI+RITRHPQMVGQVIWCLAH +WIGNSVAVAAS GLI HHLFGVWN
Sbjct: 241  AAVDKPKLHLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIAHHLFGVWN 300

Query: 1065 GDRRLGLRYGEAFEVVK 1115
            GDRRL +RYGE FE+VK
Sbjct: 301  GDRRLAIRYGEDFELVK 317