BLASTX nr result
ID: Coptis24_contig00016517
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00016517
(880 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002523830.1| 40S ribosomal protein S14, putative [Ricinus... 115 4e-42
ref|XP_004147408.1| PREDICTED: 40S ribosomal protein S14-2-like ... 115 1e-41
ref|XP_004147409.1| PREDICTED: 40S ribosomal protein S14-2-like ... 115 1e-41
ref|XP_004149195.1| PREDICTED: 40S ribosomal protein S14-2-like ... 115 1e-41
gb|AAO41731.1| cytoplasmic ribosomal protein S14 [Brassica napus] 114 1e-41
>ref|XP_002523830.1| 40S ribosomal protein S14, putative [Ricinus communis]
gi|223536918|gb|EEF38556.1| 40S ribosomal protein S14,
putative [Ricinus communis]
Length = 150
Score = 115 bits (289), Expect(3) = 4e-42
Identities = 56/62 (90%), Positives = 58/62 (93%)
Frame = +2
Query: 2 SKRKVREPKEETVTLGPAVGEGEQVFGVAHIYASFNDTFIHVTDLSGRETMVRITGGMKV 181
SK+K REPKEE VTLGPA+ EGE VFGVAHIYASFNDTFIHVTDLSGRETMVRITGGMKV
Sbjct: 2 SKKKTREPKEENVTLGPAIREGEHVFGVAHIYASFNDTFIHVTDLSGRETMVRITGGMKV 61
Query: 182 KA 187
KA
Sbjct: 62 KA 63
Score = 68.9 bits (167), Expect(3) = 4e-42
Identities = 37/50 (74%), Positives = 37/50 (74%)
Frame = +1
Query: 301 QDVAQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGR 450
QDV QRCKELGITALHIKLRA AQSALRALARSGMKIGR
Sbjct: 78 QDVTQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGR 127
Score = 34.3 bits (77), Expect(3) = 4e-42
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 506 IGRIEDVTPIPTDST 550
IGRIEDVTPIPTDST
Sbjct: 125 IGRIEDVTPIPTDST 139
>ref|XP_004147408.1| PREDICTED: 40S ribosomal protein S14-2-like isoform 1 [Cucumis
sativus]
Length = 173
Score = 115 bits (288), Expect(3) = 1e-41
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +2
Query: 2 SKRKVREPKEETVTLGPAVGEGEQVFGVAHIYASFNDTFIHVTDLSGRETMVRITGGMKV 181
S+RK REPKEETVTLGPAV EGE VFGVAHI+ASFNDTFIHVTDLSGRET+VRITGGMKV
Sbjct: 25 SRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 84
Query: 182 KA 187
KA
Sbjct: 85 KA 86
Score = 68.2 bits (165), Expect(3) = 1e-41
Identities = 36/50 (72%), Positives = 38/50 (76%)
Frame = +1
Query: 301 QDVAQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGR 450
QDV+QRCKELGITALHIKLRA AQSALRALARSGM+IGR
Sbjct: 101 QDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMRIGR 150
Score = 34.3 bits (77), Expect(3) = 1e-41
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 506 IGRIEDVTPIPTDST 550
IGRIEDVTPIPTDST
Sbjct: 148 IGRIEDVTPIPTDST 162
>ref|XP_004147409.1| PREDICTED: 40S ribosomal protein S14-2-like isoform 2 [Cucumis
sativus]
Length = 152
Score = 115 bits (288), Expect(3) = 1e-41
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +2
Query: 2 SKRKVREPKEETVTLGPAVGEGEQVFGVAHIYASFNDTFIHVTDLSGRETMVRITGGMKV 181
S+RK REPKEETVTLGPAV EGE VFGVAHI+ASFNDTFIHVTDLSGRET+VRITGGMKV
Sbjct: 4 SRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 63
Query: 182 KA 187
KA
Sbjct: 64 KA 65
Score = 68.2 bits (165), Expect(3) = 1e-41
Identities = 36/50 (72%), Positives = 38/50 (76%)
Frame = +1
Query: 301 QDVAQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGR 450
QDV+QRCKELGITALHIKLRA AQSALRALARSGM+IGR
Sbjct: 80 QDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMRIGR 129
Score = 34.3 bits (77), Expect(3) = 1e-41
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 506 IGRIEDVTPIPTDST 550
IGRIEDVTPIPTDST
Sbjct: 127 IGRIEDVTPIPTDST 141
>ref|XP_004149195.1| PREDICTED: 40S ribosomal protein S14-2-like [Cucumis sativus]
gi|449462948|ref|XP_004149197.1| PREDICTED: 40S
ribosomal protein S14-2-like [Cucumis sativus]
gi|449500886|ref|XP_004161220.1| PREDICTED: 40S
ribosomal protein S14-2-like [Cucumis sativus]
gi|449500891|ref|XP_004161222.1| PREDICTED: 40S
ribosomal protein S14-2-like [Cucumis sativus]
Length = 150
Score = 115 bits (288), Expect(3) = 1e-41
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +2
Query: 2 SKRKVREPKEETVTLGPAVGEGEQVFGVAHIYASFNDTFIHVTDLSGRETMVRITGGMKV 181
S+RK REPKEETVTLGPAV EGE VFGVAHI+ASFNDTFIHVTDLSGRET+VRITGGMKV
Sbjct: 2 SRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 61
Query: 182 KA 187
KA
Sbjct: 62 KA 63
Score = 68.2 bits (165), Expect(3) = 1e-41
Identities = 36/50 (72%), Positives = 38/50 (76%)
Frame = +1
Query: 301 QDVAQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGR 450
QDV+QRCKELGITALHIKLRA AQSALRALARSGM+IGR
Sbjct: 78 QDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMRIGR 127
Score = 34.3 bits (77), Expect(3) = 1e-41
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 506 IGRIEDVTPIPTDST 550
IGRIEDVTPIPTDST
Sbjct: 125 IGRIEDVTPIPTDST 139
>gb|AAO41731.1| cytoplasmic ribosomal protein S14 [Brassica napus]
Length = 150
Score = 114 bits (286), Expect(3) = 1e-41
Identities = 55/62 (88%), Positives = 59/62 (95%)
Frame = +2
Query: 2 SKRKVREPKEETVTLGPAVGEGEQVFGVAHIYASFNDTFIHVTDLSGRETMVRITGGMKV 181
S+RK REPKEETVTLGPAV +GEQVFGV HI+ASFNDTFIHVTDLSGRET+VRITGGMKV
Sbjct: 2 SRRKTREPKEETVTLGPAVRDGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMKV 61
Query: 182 KA 187
KA
Sbjct: 62 KA 63
Score = 69.3 bits (168), Expect(3) = 1e-41
Identities = 36/50 (72%), Positives = 38/50 (76%)
Frame = +1
Query: 301 QDVAQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGR 450
QDVAQRCKELGITA+H+KLRA AQSALRALARSGMKIGR
Sbjct: 78 QDVAQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALARSGMKIGR 127
Score = 33.9 bits (76), Expect(3) = 1e-41
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2
Query: 506 IGRIEDVTPIPTDST 550
IGRIEDVTP+PTDST
Sbjct: 125 IGRIEDVTPVPTDST 139