BLASTX nr result

ID: Coptis24_contig00016457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016457
         (786 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266903.2| PREDICTED: protein FAM188A-like [Vitis vinif...   209   7e-52
emb|CBI18194.3| unnamed protein product [Vitis vinifera]              209   7e-52
ref|XP_003592118.1| Protein FAM188A [Medicago truncatula] gi|355...   206   6e-51
ref|XP_003556149.1| PREDICTED: protein FAM188A-like [Glycine max]     202   5e-50
ref|XP_003536431.1| PREDICTED: protein FAM188A-like isoform 2 [G...   202   9e-50

>ref|XP_002266903.2| PREDICTED: protein FAM188A-like [Vitis vinifera]
          Length = 337

 Score =  209 bits (531), Expect = 7e-52
 Identities = 112/180 (62%), Positives = 127/180 (70%), Gaps = 15/180 (8%)
 Frame = +3

Query: 96  KDQSGGGGFISVEGLHEVLRDTNINLPREKLDNLCGMGFIVWSEFWQVLLDLDKSLGGWK 275
           +DQSGGGGFISVEG H+VLR+T I+LP EKLD+LCG GFIVWSEFWQVLLDLDK  GG K
Sbjct: 162 QDQSGGGGFISVEGFHQVLRETGIDLPPEKLDHLCGAGFIVWSEFWQVLLDLDKRFGGLK 221

Query: 276 DSTRLMGRKLFDLYHFNGIAKSVLNGSQATADSDSPIQRPRLLKLRVSAPPRWTPDEFIT 455
           D T  MG+K+FDLYHFNGIAKSVLNGS A + S+ PIQRPRL KLRVS PPRWTP+EF+ 
Sbjct: 222 DPTGSMGKKVFDLYHFNGIAKSVLNGSPAASGSEMPIQRPRLTKLRVSVPPRWTPEEFMA 281

Query: 456 SV--PSSSGG----------EVSWE---RHCC*SDTTQASSAYTGC*LH*NNWVGDPPSI 590
            V  PS+SGG          EV+     +H    D  +       C     NWVGDPPSI
Sbjct: 282 DVVLPSASGGNDPSAKETVIEVAKPEPAQHAPLVDCIRTRWPRAVC-----NWVGDPPSI 336


>emb|CBI18194.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  209 bits (531), Expect = 7e-52
 Identities = 112/180 (62%), Positives = 127/180 (70%), Gaps = 15/180 (8%)
 Frame = +3

Query: 96  KDQSGGGGFISVEGLHEVLRDTNINLPREKLDNLCGMGFIVWSEFWQVLLDLDKSLGGWK 275
           +DQSGGGGFISVEG H+VLR+T I+LP EKLD+LCG GFIVWSEFWQVLLDLDK  GG K
Sbjct: 441 QDQSGGGGFISVEGFHQVLRETGIDLPPEKLDHLCGAGFIVWSEFWQVLLDLDKRFGGLK 500

Query: 276 DSTRLMGRKLFDLYHFNGIAKSVLNGSQATADSDSPIQRPRLLKLRVSAPPRWTPDEFIT 455
           D T  MG+K+FDLYHFNGIAKSVLNGS A + S+ PIQRPRL KLRVS PPRWTP+EF+ 
Sbjct: 501 DPTGSMGKKVFDLYHFNGIAKSVLNGSPAASGSEMPIQRPRLTKLRVSVPPRWTPEEFMA 560

Query: 456 SV--PSSSGG----------EVSWE---RHCC*SDTTQASSAYTGC*LH*NNWVGDPPSI 590
            V  PS+SGG          EV+     +H    D  +       C     NWVGDPPSI
Sbjct: 561 DVVLPSASGGNDPSAKETVIEVAKPEPAQHAPLVDCIRTRWPRAVC-----NWVGDPPSI 615


>ref|XP_003592118.1| Protein FAM188A [Medicago truncatula] gi|355481166|gb|AES62369.1|
            Protein FAM188A [Medicago truncatula]
          Length = 666

 Score =  206 bits (523), Expect = 6e-51
 Identities = 108/178 (60%), Positives = 129/178 (72%), Gaps = 13/178 (7%)
 Frame = +3

Query: 96   KDQSGGGGFISVEGLHEVLRDTNINLPREKLDNLCGMGFIVWSEFWQVLLDLDKSLGGWK 275
            +DQSGGGGFISVEG H+V+R+TNI LP +KLDNLC  GFIVWSEFWQV+LDLDKSLGG K
Sbjct: 493  QDQSGGGGFISVEGFHQVIRETNIKLPADKLDNLCSAGFIVWSEFWQVILDLDKSLGGLK 552

Query: 276  DSTRLMGRKLFDLYHFNGIAKSVLNGSQATADSDSPIQRPRLLKLRVSAPPRWTPDEFIT 455
            DS+ LMG+K+FDL+HFNGIAKS LNGSQ +   ++P+QRPRL KL VS PPRWTP+EF+T
Sbjct: 553  DSSGLMGKKVFDLFHFNGIAKSDLNGSQVSFGGETPLQRPRLTKLSVSVPPRWTPEEFMT 612

Query: 456  SV--PSSSGG--------EVSW---ERHCC*SDTTQASSAYTGC*LH*NNWVGDPPSI 590
            +V  PS+SG         EVS     +H    D  +   A   C     +W GDPPSI
Sbjct: 613  NVQGPSASGASDSAGKDTEVSKPEPTQHAPLVDCIRTRWARAVC-----SWSGDPPSI 665


>ref|XP_003556149.1| PREDICTED: protein FAM188A-like [Glycine max]
          Length = 612

 Score =  202 bits (515), Expect = 5e-50
 Identities = 104/178 (58%), Positives = 121/178 (67%), Gaps = 13/178 (7%)
 Frame = +3

Query: 96  KDQSGGGGFISVEGLHEVLRDTNINLPREKLDNLCGMGFIVWSEFWQVLLDLDKSLGGWK 275
           +DQSGGGGFISVEG H+VLR+TNI  P EKL++LC  GFIVWSEFWQV+LDLDKSLGG K
Sbjct: 439 QDQSGGGGFISVEGFHQVLRETNIKFPPEKLEHLCSSGFIVWSEFWQVILDLDKSLGGLK 498

Query: 276 DSTRLMGRKLFDLYHFNGIAKSVLNGSQATADSDSPIQRPRLLKLRVSAPPRWTPDEFIT 455
           DS+ LMG+K+FDLYHFNGIAKS LNGSQ  +  ++P+QRPRL KLRVS PPRWTP+EF+ 
Sbjct: 499 DSSGLMGKKVFDLYHFNGIAKSDLNGSQVNSRGETPLQRPRLTKLRVSVPPRWTPEEFMA 558

Query: 456 SVPSSSGGEVSW-------------ERHCC*SDTTQASSAYTGC*LH*NNWVGDPPSI 590
            V  SS    S               +H    D  +   A   C      W GDPPSI
Sbjct: 559 DVKVSSAASASESTGKDDEVSKPEPSQHAPLVDCIRTRWARAVC-----TWSGDPPSI 611


>ref|XP_003536431.1| PREDICTED: protein FAM188A-like isoform 2 [Glycine max]
          Length = 609

 Score =  202 bits (513), Expect = 9e-50
 Identities = 103/178 (57%), Positives = 121/178 (67%), Gaps = 13/178 (7%)
 Frame = +3

Query: 96  KDQSGGGGFISVEGLHEVLRDTNINLPREKLDNLCGMGFIVWSEFWQVLLDLDKSLGGWK 275
           +DQSGGGGFISVEG H+VLR+TNI  P EKL++LC  GFIVWSEFWQV+LDLDKSLGG K
Sbjct: 436 QDQSGGGGFISVEGFHQVLRETNIKFPPEKLEHLCSAGFIVWSEFWQVILDLDKSLGGLK 495

Query: 276 DSTRLMGRKLFDLYHFNGIAKSVLNGSQATADSDSPIQRPRLLKLRVSAPPRWTPDEFIT 455
           DS+ LMG+K+FDLYHFNGIAKS LNGSQ  +  ++P+QRPRL KLRVS PPRWTP+EF+ 
Sbjct: 496 DSSGLMGKKVFDLYHFNGIAKSDLNGSQVNSGGETPLQRPRLTKLRVSVPPRWTPEEFMA 555

Query: 456 SVPSSSGGEVSW-------------ERHCC*SDTTQASSAYTGC*LH*NNWVGDPPSI 590
            V   S    S               +H    D  +   A   C     +W GDPPSI
Sbjct: 556 DVKVPSAASASESAGKDNEVSKPEPSKHAPLVDCIRTRWARAVC-----SWSGDPPSI 608


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