BLASTX nr result
ID: Coptis24_contig00016431
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00016431 (411 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002326235.1| predicted protein [Populus trichocarpa] gi|2... 69 4e-10 ref|XP_003632751.1| PREDICTED: uncharacterized protein LOC100240... 67 2e-09 ref|XP_002283988.1| PREDICTED: uncharacterized protein LOC100240... 67 2e-09 ref|XP_002881456.1| hypothetical protein ARALYDRAFT_902780 [Arab... 59 5e-07 ref|XP_003542543.1| PREDICTED: uncharacterized protein LOC100804... 58 7e-07 >ref|XP_002326235.1| predicted protein [Populus trichocarpa] gi|222833428|gb|EEE71905.1| predicted protein [Populus trichocarpa] Length = 460 Score = 68.9 bits (167), Expect = 4e-10 Identities = 38/73 (52%), Positives = 51/73 (69%) Frame = +1 Query: 130 MGTKGLVLFLISGFAVAILSALFITNPKHPCLLSSFNSSQDEFGLVHINGLSETIKVWPD 309 M T+GLVL+L+SGF+VAILS F++ HP +S N + D F + LS T KVWP Sbjct: 1 MATRGLVLYLLSGFSVAILSVFFLS---HPNEKASPNPNSDIFASPY---LSTTDKVWPK 54 Query: 310 LEFNWRSILATLI 348 LEF+WR++LAT+I Sbjct: 55 LEFSWRTVLATVI 67 >ref|XP_003632751.1| PREDICTED: uncharacterized protein LOC100240792 isoform 2 [Vitis vinifera] Length = 369 Score = 66.6 bits (161), Expect = 2e-09 Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 5/78 (6%) Frame = +1 Query: 130 MGTKGLVLFLISGFAVAILSALFITNPK-----HPCLLSSFNSSQDEFGLVHINGLSETI 294 M T+GLVL+L+SGF+VA+LS F T+P P LSS N++ + ++ SE Sbjct: 1 MATRGLVLYLLSGFSVAVLSVFFFTDPNGNHTYPPSNLSSLNTTLLQNPFPSVSSSSE-- 58 Query: 295 KVWPDLEFNWRSILATLI 348 KVWP+L+F+WR +LAT+I Sbjct: 59 KVWPELKFSWRIVLATVI 76 >ref|XP_002283988.1| PREDICTED: uncharacterized protein LOC100240792 isoform 1 [Vitis vinifera] gi|297740033|emb|CBI30215.3| unnamed protein product [Vitis vinifera] Length = 469 Score = 66.6 bits (161), Expect = 2e-09 Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 5/78 (6%) Frame = +1 Query: 130 MGTKGLVLFLISGFAVAILSALFITNPK-----HPCLLSSFNSSQDEFGLVHINGLSETI 294 M T+GLVL+L+SGF+VA+LS F T+P P LSS N++ + ++ SE Sbjct: 1 MATRGLVLYLLSGFSVAVLSVFFFTDPNGNHTYPPSNLSSLNTTLLQNPFPSVSSSSE-- 58 Query: 295 KVWPDLEFNWRSILATLI 348 KVWP+L+F+WR +LAT+I Sbjct: 59 KVWPELKFSWRIVLATVI 76 >ref|XP_002881456.1| hypothetical protein ARALYDRAFT_902780 [Arabidopsis lyrata subsp. lyrata] gi|297327295|gb|EFH57715.1| hypothetical protein ARALYDRAFT_902780 [Arabidopsis lyrata subsp. lyrata] Length = 463 Score = 58.5 bits (140), Expect = 5e-07 Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 3/75 (4%) Frame = +1 Query: 133 GTKGLVLFLISGFAVAILSALFI---TNPKHPCLLSSFNSSQDEFGLVHINGLSETIKVW 303 GT G +L+L++GF+VA+ S ++ TNP H LSS + LS T K+W Sbjct: 8 GTGGFILYLLAGFSVAVFSVSYVGDTTNPNHHHHLSSSSP------------LSATEKIW 55 Query: 304 PDLEFNWRSILATLI 348 PDL+F+W+ +LAT+I Sbjct: 56 PDLKFSWKLVLATVI 70 >ref|XP_003542543.1| PREDICTED: uncharacterized protein LOC100804918 [Glycine max] Length = 464 Score = 58.2 bits (139), Expect = 7e-07 Identities = 29/73 (39%), Positives = 47/73 (64%) Frame = +1 Query: 130 MGTKGLVLFLISGFAVAILSALFITNPKHPCLLSSFNSSQDEFGLVHINGLSETIKVWPD 309 + ++G + +++S F+ A+LSALFITN H ++ + + +SET+KVWPD Sbjct: 4 LSSRGFIAYVLSAFSCAVLSALFITNHIH--------DDDNKAVTLLASRVSETLKVWPD 55 Query: 310 LEFNWRSILATLI 348 LE +WR +LAT+I Sbjct: 56 LEPSWRLLLATVI 68