BLASTX nr result

ID: Coptis24_contig00016431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016431
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326235.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
ref|XP_003632751.1| PREDICTED: uncharacterized protein LOC100240...    67   2e-09
ref|XP_002283988.1| PREDICTED: uncharacterized protein LOC100240...    67   2e-09
ref|XP_002881456.1| hypothetical protein ARALYDRAFT_902780 [Arab...    59   5e-07
ref|XP_003542543.1| PREDICTED: uncharacterized protein LOC100804...    58   7e-07

>ref|XP_002326235.1| predicted protein [Populus trichocarpa] gi|222833428|gb|EEE71905.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 38/73 (52%), Positives = 51/73 (69%)
 Frame = +1

Query: 130 MGTKGLVLFLISGFAVAILSALFITNPKHPCLLSSFNSSQDEFGLVHINGLSETIKVWPD 309
           M T+GLVL+L+SGF+VAILS  F++   HP   +S N + D F   +   LS T KVWP 
Sbjct: 1   MATRGLVLYLLSGFSVAILSVFFLS---HPNEKASPNPNSDIFASPY---LSTTDKVWPK 54

Query: 310 LEFNWRSILATLI 348
           LEF+WR++LAT+I
Sbjct: 55  LEFSWRTVLATVI 67


>ref|XP_003632751.1| PREDICTED: uncharacterized protein LOC100240792 isoform 2 [Vitis
           vinifera]
          Length = 369

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 5/78 (6%)
 Frame = +1

Query: 130 MGTKGLVLFLISGFAVAILSALFITNPK-----HPCLLSSFNSSQDEFGLVHINGLSETI 294
           M T+GLVL+L+SGF+VA+LS  F T+P       P  LSS N++  +     ++  SE  
Sbjct: 1   MATRGLVLYLLSGFSVAVLSVFFFTDPNGNHTYPPSNLSSLNTTLLQNPFPSVSSSSE-- 58

Query: 295 KVWPDLEFNWRSILATLI 348
           KVWP+L+F+WR +LAT+I
Sbjct: 59  KVWPELKFSWRIVLATVI 76


>ref|XP_002283988.1| PREDICTED: uncharacterized protein LOC100240792 isoform 1 [Vitis
           vinifera] gi|297740033|emb|CBI30215.3| unnamed protein
           product [Vitis vinifera]
          Length = 469

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 5/78 (6%)
 Frame = +1

Query: 130 MGTKGLVLFLISGFAVAILSALFITNPK-----HPCLLSSFNSSQDEFGLVHINGLSETI 294
           M T+GLVL+L+SGF+VA+LS  F T+P       P  LSS N++  +     ++  SE  
Sbjct: 1   MATRGLVLYLLSGFSVAVLSVFFFTDPNGNHTYPPSNLSSLNTTLLQNPFPSVSSSSE-- 58

Query: 295 KVWPDLEFNWRSILATLI 348
           KVWP+L+F+WR +LAT+I
Sbjct: 59  KVWPELKFSWRIVLATVI 76


>ref|XP_002881456.1| hypothetical protein ARALYDRAFT_902780 [Arabidopsis lyrata subsp.
           lyrata] gi|297327295|gb|EFH57715.1| hypothetical protein
           ARALYDRAFT_902780 [Arabidopsis lyrata subsp. lyrata]
          Length = 463

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
 Frame = +1

Query: 133 GTKGLVLFLISGFAVAILSALFI---TNPKHPCLLSSFNSSQDEFGLVHINGLSETIKVW 303
           GT G +L+L++GF+VA+ S  ++   TNP H   LSS +             LS T K+W
Sbjct: 8   GTGGFILYLLAGFSVAVFSVSYVGDTTNPNHHHHLSSSSP------------LSATEKIW 55

Query: 304 PDLEFNWRSILATLI 348
           PDL+F+W+ +LAT+I
Sbjct: 56  PDLKFSWKLVLATVI 70


>ref|XP_003542543.1| PREDICTED: uncharacterized protein LOC100804918 [Glycine max]
          Length = 464

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/73 (39%), Positives = 47/73 (64%)
 Frame = +1

Query: 130 MGTKGLVLFLISGFAVAILSALFITNPKHPCLLSSFNSSQDEFGLVHINGLSETIKVWPD 309
           + ++G + +++S F+ A+LSALFITN  H           ++   +  + +SET+KVWPD
Sbjct: 4   LSSRGFIAYVLSAFSCAVLSALFITNHIH--------DDDNKAVTLLASRVSETLKVWPD 55

Query: 310 LEFNWRSILATLI 348
           LE +WR +LAT+I
Sbjct: 56  LEPSWRLLLATVI 68


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