BLASTX nr result

ID: Coptis24_contig00016423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016423
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321362.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
gb|ABK28071.1| unknown [Arabidopsis thaliana]                          64   2e-08
ref|NP_001031132.1| uncharacterized protein [Arabidopsis thalian...    64   2e-08
ref|XP_003631409.1| PREDICTED: uncharacterized protein LOC100853...    63   2e-08
ref|XP_002317666.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08

>ref|XP_002321362.1| predicted protein [Populus trichocarpa] gi|222868358|gb|EEF05489.1|
           predicted protein [Populus trichocarpa]
          Length = 92

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 9/93 (9%)
 Frame = -1

Query: 317 MMSIFSSFDAVCAEYLGQKVGF---GPYTQFKKEVKNM------ESRQNESGTSNSTPSA 165
           MMS+FSSFDA+CAE  GQK  F    P    + EV++M      E  +++S  S+ +P A
Sbjct: 2   MMSMFSSFDALCAESFGQKPNFSFSAPKEGNRPEVESMKKSLMSEGNKDKSSASSKSPPA 61

Query: 164 QVSNKVPQKNQSMKPRFALELDGLNCFETVVSH 66
            +   + Q  Q  + RFA ELDG++CFET++ +
Sbjct: 62  SIDKSLQQ--QKRRLRFAPELDGVHCFETILPY 92


>gb|ABK28071.1| unknown [Arabidopsis thaliana]
          Length = 85

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
 Frame = -1

Query: 317 MMSIFSSFDAVCAEYLGQKVGFGPYTQFKKEVKNMESRQNESGTSNSTPSAQVSNKVPQK 138
           M S+FS+FDA+CAE +G+KV    Y    +  +N  S  +  G  N++ S +   K   K
Sbjct: 1   MNSMFSAFDAMCAEIMGKKVTAASYVY--RSERNSASSSSSVGGQNASLSLKKDEKA-SK 57

Query: 137 NQSMK---PRFALELDGLNCFETVV 72
           N  +    PRFALELDGL+CFET+V
Sbjct: 58  NMDLPTKTPRFALELDGLHCFETIV 82


>ref|NP_001031132.1| uncharacterized protein [Arabidopsis thaliana]
           gi|62320897|dbj|BAD93886.1| hypothetical protein
           [Arabidopsis thaliana] gi|98962165|gb|ABF59412.1|
           unknown protein [Arabidopsis thaliana]
           gi|332193419|gb|AEE31540.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 84

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
 Frame = -1

Query: 317 MMSIFSSFDAVCAEYLGQKVGFGPYTQFKKEVKNMESRQNESGTSNSTPSAQVSNKVPQK 138
           M S+FS+FDA+CAE +G+KV    Y    +  +N  S  +  G  N++ S +   K   K
Sbjct: 1   MNSMFSAFDAMCAEIMGKKVTAASYVY--RSERNSASSSSSVGGQNASLSLKKDEKA-SK 57

Query: 137 NQSMK---PRFALELDGLNCFETVV 72
           N  +    PRFALELDGL+CFET+V
Sbjct: 58  NMDLPTKTPRFALELDGLHCFETIV 82


>ref|XP_003631409.1| PREDICTED: uncharacterized protein LOC100853997 [Vitis vinifera]
          Length = 75

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 41/83 (49%), Positives = 51/83 (61%)
 Frame = -1

Query: 317 MMSIFSSFDAVCAEYLGQKVGFGPYTQFKKEVKNMESRQNESGTSNSTPSAQVSNKVPQK 138
           M SIFSSFDAVC E+L QK+     +  K     MES+Q+     N +P A V    P+K
Sbjct: 1   MNSIFSSFDAVCFEFLSQKLKSSLPSGNK-----MESQQSTEKLGNPSPPASVGK--PRK 53

Query: 137 NQSMKPRFALELDGLNCFETVVS 69
            +   PRFA ELDGL+CFET+VS
Sbjct: 54  ERV--PRFAPELDGLHCFETLVS 74


>ref|XP_002317666.1| predicted protein [Populus trichocarpa] gi|222860731|gb|EEE98278.1|
           predicted protein [Populus trichocarpa]
          Length = 85

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
 Frame = -1

Query: 317 MMSIFSSFDAVCAEYLGQKVGFG-PYTQFKKEVKNMESRQNESGTSNSTPSAQVSNKVPQ 141
           M S+FSSFDA+C E+L QKV     +T      K + SR+              S  + +
Sbjct: 1   MNSMFSSFDALCNEFLSQKVKSSFAFTTMDGNTKRVLSRKVAEDKLIKNQQGSSSRSLTR 60

Query: 140 KNQSMKPRFALELDGLNCFETVVSH 66
           K +    RFALELDGLNCFET+V++
Sbjct: 61  KQEKKMTRFALELDGLNCFETIVNY 85


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