BLASTX nr result

ID: Coptis24_contig00016401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016401
         (1478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263791.1| PREDICTED: DNA replication licensing factor ...   736   0.0  
emb|CBI25611.3| unnamed protein product [Vitis vinifera]              733   0.0  
ref|XP_004139272.1| PREDICTED: DNA replication licensing factor ...   707   0.0  
ref|XP_003542619.1| PREDICTED: DNA replication licensing factor ...   697   0.0  
ref|XP_003549699.1| PREDICTED: DNA replication licensing factor ...   697   0.0  

>ref|XP_002263791.1| PREDICTED: DNA replication licensing factor mcm5-A-like [Vitis
            vinifera]
          Length = 732

 Score =  736 bits (1901), Expect = 0.0
 Identities = 369/418 (88%), Positives = 404/418 (96%)
 Frame = -3

Query: 1476 SEDVEEFKKFASEVDSYKNICSKIAPSIYGHEDVKKAVACLLFGGSRKELPDGVRLRGDI 1297
            SED+EEFKKFASE D+YK ICSKIAPSIYGH+DVKKAVACLLFGGSRK LPDGV+LRGDI
Sbjct: 315  SEDMEEFKKFASEADAYKRICSKIAPSIYGHDDVKKAVACLLFGGSRKNLPDGVKLRGDI 374

Query: 1296 NVLLLGDPSTAKSQFLKFVEKTAPIAVYTSGKGSSAAGLTASVIRDNSSREFYLEGGAMV 1117
            NVLLLGDPSTAKSQFLKFVEKTAP+AVYTSGKGSSAAGLTASVIRDNS+REFYLEGGAMV
Sbjct: 375  NVLLLGDPSTAKSQFLKFVEKTAPVAVYTSGKGSSAAGLTASVIRDNSTREFYLEGGAMV 434

Query: 1116 LADGGVVCIDEFDKMRSEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPPSGRY 937
            LADGGVVCIDEFDKMR+EDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPPSGRY
Sbjct: 435  LADGGVVCIDEFDKMRAEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPPSGRY 494

Query: 936  DDLKSVQDNIDLQTTILSRFDLIFIVKDVRMYSQDKLIASHVIKVHSTPHASSRDIRDPK 757
            DDLK+ QDNIDLQTTILSRFDLIFIVKD+RMYSQDK+IASH+IKVH++  A+S D R  K
Sbjct: 495  DDLKTAQDNIDLQTTILSRFDLIFIVKDIRMYSQDKIIASHIIKVHASADATSGDTRTSK 554

Query: 756  EEDWLKRYIQYCRTEIHPRLSDSAATMLQNNYVKIRQDMRQQANESGESAVIPITVRQLE 577
            EE+WLKRYIQYCRTE HPRLSDSA+TMLQNNYVKIRQDMRQQANE+GE+A IPITVRQLE
Sbjct: 555  EENWLKRYIQYCRTECHPRLSDSASTMLQNNYVKIRQDMRQQANETGEAAAIPITVRQLE 614

Query: 576  AIIRLSESLAKMRMSHVATEGHVLEALRLFNVSTLDAARSGISQHLNMTTEMANEIKQAE 397
            AI+RLSE+LAKMR+SHVATE +VLEA+RLFNVST+DAARSGI++H+N+T EMANEIKQAE
Sbjct: 615  AIVRLSEALAKMRLSHVATEENVLEAIRLFNVSTMDAARSGINEHMNLTAEMANEIKQAE 674

Query: 396  TQIKRRMGIGSHISERRLIDDLSRIGLNESIVRRALLIMHQRDEVEYKRERRVILRKA 223
            TQIKRRMGIGSHISERRLIDD++R+G+NESIVRRALLIMHQRDEVEYKRERR+I+RK+
Sbjct: 675  TQIKRRMGIGSHISERRLIDDMTRMGMNESIVRRALLIMHQRDEVEYKRERRIIVRKS 732


>emb|CBI25611.3| unnamed protein product [Vitis vinifera]
          Length = 732

 Score =  733 bits (1892), Expect = 0.0
 Identities = 367/418 (87%), Positives = 403/418 (96%)
 Frame = -3

Query: 1476 SEDVEEFKKFASEVDSYKNICSKIAPSIYGHEDVKKAVACLLFGGSRKELPDGVRLRGDI 1297
            SED+EEFKKFASE D+YK ICSKIAPSIYGH+DVKKAVACLLFGGSRK LPDGV+LRGDI
Sbjct: 315  SEDMEEFKKFASEADAYKRICSKIAPSIYGHDDVKKAVACLLFGGSRKNLPDGVKLRGDI 374

Query: 1296 NVLLLGDPSTAKSQFLKFVEKTAPIAVYTSGKGSSAAGLTASVIRDNSSREFYLEGGAMV 1117
            NVLLLGDPSTAKSQFLKFVEKTAP+AVYTSGKGSSAAGLTASVIRDNS+REFYLEGGAMV
Sbjct: 375  NVLLLGDPSTAKSQFLKFVEKTAPVAVYTSGKGSSAAGLTASVIRDNSTREFYLEGGAMV 434

Query: 1116 LADGGVVCIDEFDKMRSEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPPSGRY 937
            LADGGVVCIDEFDKMR+EDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPPSGRY
Sbjct: 435  LADGGVVCIDEFDKMRAEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPPSGRY 494

Query: 936  DDLKSVQDNIDLQTTILSRFDLIFIVKDVRMYSQDKLIASHVIKVHSTPHASSRDIRDPK 757
            DDLK+ QDNIDLQTTILSRFDLIFIVKD+RMYSQDK+IASH+IKVH++  A+S D R  K
Sbjct: 495  DDLKTAQDNIDLQTTILSRFDLIFIVKDIRMYSQDKIIASHIIKVHASADATSGDTRTSK 554

Query: 756  EEDWLKRYIQYCRTEIHPRLSDSAATMLQNNYVKIRQDMRQQANESGESAVIPITVRQLE 577
            EE+WLKRYIQYCRTE HPRLSDSA+TMLQNNYVKIRQDMRQQANE+GE+A IPITVRQLE
Sbjct: 555  EENWLKRYIQYCRTECHPRLSDSASTMLQNNYVKIRQDMRQQANETGEAAAIPITVRQLE 614

Query: 576  AIIRLSESLAKMRMSHVATEGHVLEALRLFNVSTLDAARSGISQHLNMTTEMANEIKQAE 397
            AI+RLSE+LAKMR+SHVATE +VLEA+RLFNVST+DAARSGI++H+N+T EMANEIK +E
Sbjct: 615  AIVRLSEALAKMRLSHVATEENVLEAIRLFNVSTMDAARSGINEHMNLTAEMANEIKASE 674

Query: 396  TQIKRRMGIGSHISERRLIDDLSRIGLNESIVRRALLIMHQRDEVEYKRERRVILRKA 223
            TQIKRRMGIGSHISERRLIDD++R+G+NESIVRRALLIMHQRDEVEYKRERR+I+RK+
Sbjct: 675  TQIKRRMGIGSHISERRLIDDMTRMGMNESIVRRALLIMHQRDEVEYKRERRIIVRKS 732


>ref|XP_004139272.1| PREDICTED: DNA replication licensing factor mcm5-A-like [Cucumis
            sativus] gi|449493665|ref|XP_004159401.1| PREDICTED: DNA
            replication licensing factor mcm5-A-like [Cucumis
            sativus]
          Length = 735

 Score =  707 bits (1824), Expect = 0.0
 Identities = 356/418 (85%), Positives = 398/418 (95%)
 Frame = -3

Query: 1476 SEDVEEFKKFASEVDSYKNICSKIAPSIYGHEDVKKAVACLLFGGSRKELPDGVRLRGDI 1297
            +ED+EEFKKFA+E D YK+ICSKIAPSI+GH+DVKKAVACLLFGGSRK LPDGV+LRGDI
Sbjct: 318  TEDIEEFKKFAAEPDVYKSICSKIAPSIFGHDDVKKAVACLLFGGSRKNLPDGVKLRGDI 377

Query: 1296 NVLLLGDPSTAKSQFLKFVEKTAPIAVYTSGKGSSAAGLTASVIRDNSSREFYLEGGAMV 1117
            NVLLLGDPSTAKSQFLKFVEKTAP+AVYTSGKGSSAAGLTASVIRD+SSREFYLEGGAMV
Sbjct: 378  NVLLLGDPSTAKSQFLKFVEKTAPVAVYTSGKGSSAAGLTASVIRDSSSREFYLEGGAMV 437

Query: 1116 LADGGVVCIDEFDKMRSEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPPSGRY 937
            LADGGVVCIDEFDKMRSEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPPSGRY
Sbjct: 438  LADGGVVCIDEFDKMRSEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPPSGRY 497

Query: 936  DDLKSVQDNIDLQTTILSRFDLIFIVKDVRMYSQDKLIASHVIKVHSTPHASSRDIRDPK 757
            DDLK+ QDNIDLQTTILSRFDLIFIVKD+RMYSQDK+IASH+IKVH++  A+  + R  K
Sbjct: 498  DDLKTAQDNIDLQTTILSRFDLIFIVKDIRMYSQDKIIASHIIKVHASAGATLGENRASK 557

Query: 756  EEDWLKRYIQYCRTEIHPRLSDSAATMLQNNYVKIRQDMRQQANESGESAVIPITVRQLE 577
            EE+WLKRYIQYCRT+ +PRLS+SA+TMLQNNYVKIRQDMRQQANE+GE+A IPITVRQLE
Sbjct: 558  EENWLKRYIQYCRTQCYPRLSESASTMLQNNYVKIRQDMRQQANETGEAAAIPITVRQLE 617

Query: 576  AIIRLSESLAKMRMSHVATEGHVLEALRLFNVSTLDAARSGISQHLNMTTEMANEIKQAE 397
            AI+RLSE+LAKM++SHVATE +V EA+RLF VST+DAARSGI Q +N+T E+ANEIKQAE
Sbjct: 618  AIVRLSEALAKMKLSHVATEENVQEAIRLFTVSTMDAARSGIHQQVNLTPEIANEIKQAE 677

Query: 396  TQIKRRMGIGSHISERRLIDDLSRIGLNESIVRRALLIMHQRDEVEYKRERRVILRKA 223
            TQIKRR+GIG+HISERRLID+L+++G+NESIVRRAL+IMHQRDEVEYKRERRVI RKA
Sbjct: 678  TQIKRRIGIGNHISERRLIDELAKMGMNESIVRRALIIMHQRDEVEYKRERRVIFRKA 735


>ref|XP_003542619.1| PREDICTED: DNA replication licensing factor mcm5-A-like [Glycine max]
          Length = 732

 Score =  697 bits (1799), Expect = 0.0
 Identities = 349/417 (83%), Positives = 392/417 (94%)
 Frame = -3

Query: 1473 EDVEEFKKFASEVDSYKNICSKIAPSIYGHEDVKKAVACLLFGGSRKELPDGVRLRGDIN 1294
            +++EEFKKFASE D+YKNICS IAPSI+GHE+VKKAVACLLFGGSRK LPDGVRLRGDIN
Sbjct: 316  DEIEEFKKFASEPDAYKNICSMIAPSIFGHEEVKKAVACLLFGGSRKNLPDGVRLRGDIN 375

Query: 1293 VLLLGDPSTAKSQFLKFVEKTAPIAVYTSGKGSSAAGLTASVIRDNSSREFYLEGGAMVL 1114
            VLLLGDPSTAKSQFLKFVEKTAPIAVYTSGKGSSAAGLTASVI+D+ +REFYLEGGAMVL
Sbjct: 376  VLLLGDPSTAKSQFLKFVEKTAPIAVYTSGKGSSAAGLTASVIQDSGTREFYLEGGAMVL 435

Query: 1113 ADGGVVCIDEFDKMRSEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPPSGRYD 934
            ADGGVVCIDEFDKMR EDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPPSGRYD
Sbjct: 436  ADGGVVCIDEFDKMRPEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPPSGRYD 495

Query: 933  DLKSVQDNIDLQTTILSRFDLIFIVKDVRMYSQDKLIASHVIKVHSTPHASSRDIRDPKE 754
            DLK+ QDNIDLQTTILSRFDLIFIVKDVRMYSQDK+IA+H+IKVH +      + R  KE
Sbjct: 496  DLKTAQDNIDLQTTILSRFDLIFIVKDVRMYSQDKIIANHIIKVHKSAGGRMGESRTFKE 555

Query: 753  EDWLKRYIQYCRTEIHPRLSDSAATMLQNNYVKIRQDMRQQANESGESAVIPITVRQLEA 574
            E+WLKRY+QYCRT+ HPRLS+SA T+LQN+YVKIRQDMRQQANE+GE+A IPITVRQLEA
Sbjct: 556  ENWLKRYLQYCRTQCHPRLSESATTLLQNHYVKIRQDMRQQANETGEAAAIPITVRQLEA 615

Query: 573  IIRLSESLAKMRMSHVATEGHVLEALRLFNVSTLDAARSGISQHLNMTTEMANEIKQAET 394
            I+RLSE+LAKM++SH+ATE +V EA+RLF VST+DAA+SGI+Q +N+T +MANEIKQAET
Sbjct: 616  IVRLSEALAKMKLSHLATEENVQEAVRLFTVSTMDAAKSGINQQINLTPDMANEIKQAET 675

Query: 393  QIKRRMGIGSHISERRLIDDLSRIGLNESIVRRALLIMHQRDEVEYKRERRVILRKA 223
            QIKRR+GIG+HISERRLIDDLSR+G+NESIVRRAL+IMHQRDE+EYKRERRV+ RKA
Sbjct: 676  QIKRRIGIGNHISERRLIDDLSRMGMNESIVRRALIIMHQRDEIEYKRERRVVFRKA 732


>ref|XP_003549699.1| PREDICTED: DNA replication licensing factor mcm5-A-like [Glycine max]
          Length = 732

 Score =  697 bits (1798), Expect = 0.0
 Identities = 348/417 (83%), Positives = 392/417 (94%)
 Frame = -3

Query: 1473 EDVEEFKKFASEVDSYKNICSKIAPSIYGHEDVKKAVACLLFGGSRKELPDGVRLRGDIN 1294
            +++EEFKKFA+E D+YKNICS IAPSI+GH+DVKKAVACLLFGGSRK LPDGVRLRGDIN
Sbjct: 316  DEIEEFKKFAAEPDAYKNICSMIAPSIFGHDDVKKAVACLLFGGSRKNLPDGVRLRGDIN 375

Query: 1293 VLLLGDPSTAKSQFLKFVEKTAPIAVYTSGKGSSAAGLTASVIRDNSSREFYLEGGAMVL 1114
            VLLLGDPSTAKSQFLKFVEKTAPIAVYTSGKGSSAAGLTASVI+D+ +REFYLEGGAMVL
Sbjct: 376  VLLLGDPSTAKSQFLKFVEKTAPIAVYTSGKGSSAAGLTASVIQDSGTREFYLEGGAMVL 435

Query: 1113 ADGGVVCIDEFDKMRSEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPPSGRYD 934
            ADGGVVCIDEFDKMR EDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPPSGRYD
Sbjct: 436  ADGGVVCIDEFDKMRPEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPPSGRYD 495

Query: 933  DLKSVQDNIDLQTTILSRFDLIFIVKDVRMYSQDKLIASHVIKVHSTPHASSRDIRDPKE 754
            DLK+ QDNIDLQTTILSRFDLIFIVKDVRMYSQDK+IA+H+IKVH +      + R  KE
Sbjct: 496  DLKTAQDNIDLQTTILSRFDLIFIVKDVRMYSQDKIIANHIIKVHKSAGGRMGESRTLKE 555

Query: 753  EDWLKRYIQYCRTEIHPRLSDSAATMLQNNYVKIRQDMRQQANESGESAVIPITVRQLEA 574
            E+WLKRY+QYCRT+ HPRLS+SA T+LQN+YVKIRQDMRQQANE+GE+A IPITVRQLEA
Sbjct: 556  ENWLKRYLQYCRTQCHPRLSESATTLLQNHYVKIRQDMRQQANETGEAAAIPITVRQLEA 615

Query: 573  IIRLSESLAKMRMSHVATEGHVLEALRLFNVSTLDAARSGISQHLNMTTEMANEIKQAET 394
            I+RLSE+LAKM++SH+ATE +V EA+RLF VST+DAA+SGI+Q +N+T +MANEIKQAET
Sbjct: 616  IVRLSEALAKMKLSHLATEENVQEAVRLFTVSTMDAAKSGINQQINLTPDMANEIKQAET 675

Query: 393  QIKRRMGIGSHISERRLIDDLSRIGLNESIVRRALLIMHQRDEVEYKRERRVILRKA 223
            QIKRR+GIG+HISERRLIDDLSR+G+NESIVRRAL+IMHQRDE+EYKRERRV+ RKA
Sbjct: 676  QIKRRIGIGNHISERRLIDDLSRMGMNESIVRRALIIMHQRDEIEYKRERRVVFRKA 732


Top