BLASTX nr result
ID: Coptis24_contig00016380
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00016380
(2550 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003555439.1| PREDICTED: probable lysine-specific demethyl... 320 9e-85
ref|XP_003535524.1| PREDICTED: probable lysine-specific demethyl... 248 7e-63
emb|CBI31438.3| unnamed protein product [Vitis vinifera] 240 1e-60
ref|XP_002273747.1| PREDICTED: probable lysine-specific demethyl... 240 1e-60
ref|XP_002315312.1| jumonji domain protein [Populus trichocarpa]... 238 5e-60
>ref|XP_003555439.1| PREDICTED: probable lysine-specific demethylase ELF6-like [Glycine
max]
Length = 1481
Score = 320 bits (821), Expect = 9e-85
Identities = 259/853 (30%), Positives = 385/853 (45%), Gaps = 52/853 (6%)
Frame = +1
Query: 4 YSKIKAHALAVAEEVGVPFDCDEIPLHCASREDLNLXXXXXXXXEHEECGEDWTSRLGLN 183
Y KIKAHA AVAEE+ FD +E+PL AS E+L L EH+EC EDWTS+LG+N
Sbjct: 674 YQKIKAHARAVAEEIHSAFDYNEVPLDTASPENLTLIDLAIDGEEHDEC-EDWTSKLGIN 732
Query: 184 LRYCVQLKKLSPFKQDQHALALGGLFTSMFGGLDCLDLKWNSRRSRTPYKAAGTRKIKTC 363
LR CV + SP KQ L G L L L W SRRSR+ +++ + K C
Sbjct: 733 LRNCVHARNNSPSKQVPWIL--GTLLYDQCLASKSLALNWQSRRSRSK-RSSCLAQTKPC 789
Query: 364 GHIEKSHPLVEEAERSNAPRVNKIVQYSRRRFREKVSPLQACSKTRGFYEKQQSRDVFAN 543
+IE+ + + P K++QYSRR+F+ K S F EK ++ +
Sbjct: 790 DNIERKEDQLY-GRIDDFPAEKKLLQYSRRKFKSKQRCFPVASMVCEFQEKSKNLSATLS 848
Query: 544 NEDVGNNVSRDT--------PCAI----------GTNGRADFVELNKDSVVNSGMQPKEN 669
D N VS+ C++ + E+ + +N N
Sbjct: 849 G-DHNNCVSKTELETENFRIDCSLLCVSASAEMSPMHPEIQIAEVPASTRLNDAKSQPSN 907
Query: 670 TSKEKREMNEISDSARYTAKNTGRXXXXXXXXXXXXXXDVKHIDCSIGQTNGIRETSDLA 849
+ ++ M I + K + H + S+ + G +E D
Sbjct: 908 SIPDRTLM--IEEVGAEIEKQNMQESDVDRNNDLTLRHSKMHCNSSVSEICG-KEGQDCL 964
Query: 850 --KCAG---------VRSVENLWIEN----DVQNNGETLNSEV-SDHENSAVMFSIKSTS 981
KC+ + + N I D + + TLN E +++++ ++++
Sbjct: 965 DKKCSSSLTNTTDRHIEMIRNSEITEAVIIDSKCDSLTLNGEGHQEYQSTCKSNNVEAAL 1024
Query: 982 GSVKLAGSSTADRVLHEPLTVGNSEVQQDGCTI-----GDSKEISKVSDPSVSPGVLAVE 1146
L ST V+ + N+ + ++ +EI +S+ P L +
Sbjct: 1025 SPASLVNHSTLASVVGSFESPNNNYTAEKISSLIFLEKATEEEIDSLSERDKEP--LIDD 1082
Query: 1147 RLWMQYEVHTNKETLEKCEVSHHANPEFMLSMKNKNGYVPLVGSSTVYRSEMQHNLLA-T 1323
R Q HT KE CEV L S+ V SEMQH
Sbjct: 1083 R---QISEHTPKEV---CEVRRELYASADLH------------STVVLDSEMQHETQGGK 1124
Query: 1324 EARETREVSDHVRSTGSLAIPCSGVGTLEAPLKDQSTDKANKEDEADNLSS------KMQ 1485
++R+ S HV + G L D+ K+ ++ + +N++
Sbjct: 1125 DSRKEINQSTHVSAITR--------GEYAEGLNDEVIPKSVEQCQFENMNKITMEPVSSY 1176
Query: 1486 VILVEQESMTDPARXXXXXXXXXXXXGEACNHVILDIPEMQLVSLSTNATCEAKVSDFAN 1665
V E + +T ++C +I D + T +++ +
Sbjct: 1177 VAKGENKCVTSSELGGSEVLVETCPKEDSCIQLISDKEK------ETEIHSVSRIDEEFC 1230
Query: 1666 SVTEPSLSDS--MVGCSE-EQELQVVEETYREGNCSAKETMELEDSHLTVLDSHSSXXXX 1836
S T+ S+ DS + CS+ EQE V E +++ ELE + S+
Sbjct: 1231 SGTDTSIDDSSSIQECSKIEQESCVTENINGIKTNLSQDNRELESCEFSTAVPRSNAGKN 1290
Query: 1837 XXXXXXVDRIKEDESSCNRFFKSPCEGLRPRTSRTATSVTGSGDXXXXXXXXXXXXQPSA 2016
V +++S+C+ F +SPCEGLRPR + A +G +
Sbjct: 1291 RKRK--VKHTTKNKSNCDNFIRSPCEGLRPRAGKIAADKSGVEINQVDKENQVAKRARRS 1348
Query: 2017 SAA---GKEKKLKMREVHRCDIENCEMSFKTRGLLIMHKRSKCTHKGCGKQFRSHKYAVL 2187
S A K KK +++ H+CD++ C MSFKT+ L +HKR+ C H+GCGK+F SHKYA+L
Sbjct: 1349 SEALVPRKNKKDDVKKPHKCDLDGCRMSFKTKAELQLHKRNLCPHEGCGKKFSSHKYALL 1408
Query: 2188 HQRVHVDERPLKCPWKGCTMSFKWAWARTEHLRVHTGERPYQCKIEGCDLTFRFVSDYSR 2367
HQRVH D+RPLKCPWKGC+MSFKWAWARTEH+RVHTGE+PY CK+EGC L+FRFVSD+SR
Sbjct: 1409 HQRVHNDDRPLKCPWKGCSMSFKWAWARTEHMRVHTGEKPYHCKVEGCGLSFRFVSDFSR 1468
Query: 2368 HRRKTGHYVDSPS 2406
HRRKTGH+V P+
Sbjct: 1469 HRRKTGHHVKPPA 1481
>ref|XP_003535524.1| PREDICTED: probable lysine-specific demethylase ELF6-like [Glycine
max]
Length = 1499
Score = 248 bits (632), Expect = 7e-63
Identities = 127/285 (44%), Positives = 179/285 (62%), Gaps = 7/285 (2%)
Frame = +1
Query: 1573 CNHVILDI-PEMQLVSLSTNATCEAKVSDFANSVTEPSLSDSMVGCSEEQELQVVEETYR 1749
C+ V+++ P+ + L ++ E ++ S+ + S S+ CS+ ++ V E
Sbjct: 1222 CSEVLVETYPKDSCIQLISDKEKETEIQSVNTSIDD---SSSIQECSKIEKESCVTENIN 1278
Query: 1750 --EGNCSAKETMELEDSHLTVLDSHSSXXXXXXXXXXVDRIKEDESSCNRFFKSPCEGLR 1923
+ N S K+ ELE LT S+ V +++S+ + F +SPCEGLR
Sbjct: 1279 GIKANLS-KDNRELESCELTTAVPRSNARKNKKRK--VKNTTKNQSNIDNFIRSPCEGLR 1335
Query: 1924 PRTSRTATSVTGSGDXXXXXXXXXXXXQPSASAAG----KEKKLKMREVHRCDIENCEMS 2091
PR + AT +G + + S+ G K KK +++ H+CD++ C+MS
Sbjct: 1336 PRAGKIATDKSGV-EINQVDKENQVAKRARRSSEGLVPHKNKKDDVKKPHKCDLDGCQMS 1394
Query: 2092 FKTRGLLIMHKRSKCTHKGCGKQFRSHKYAVLHQRVHVDERPLKCPWKGCTMSFKWAWAR 2271
FKT+ L++HKR+ C H+GCGK+F SHKYA+LHQRVH DERPLKCPWKGC+MSFKWAWAR
Sbjct: 1395 FKTKAELLLHKRNLCPHEGCGKKFSSHKYALLHQRVHDDERPLKCPWKGCSMSFKWAWAR 1454
Query: 2272 TEHLRVHTGERPYQCKIEGCDLTFRFVSDYSRHRRKTGHYVDSPS 2406
TEH+RVHTGE+PY CK+EGC L+FRFVSD+SRHRRKTGH+V P+
Sbjct: 1455 TEHIRVHTGEKPYHCKVEGCGLSFRFVSDFSRHRRKTGHHVKPPA 1499
Score = 112 bits (279), Expect = 6e-22
Identities = 71/182 (39%), Positives = 94/182 (51%)
Frame = +1
Query: 4 YSKIKAHALAVAEEVGVPFDCDEIPLHCASREDLNLXXXXXXXXEHEECGEDWTSRLGLN 183
Y KIKAHA AVAEE+ FD +E+PL AS E+L L EH+EC EDWTS+LG+N
Sbjct: 703 YQKIKAHARAVAEEIHSAFDYNEVPLDTASPENLTLIDLAIDGEEHDEC-EDWTSKLGIN 761
Query: 184 LRYCVQLKKLSPFKQDQHALALGGLFTSMFGGLDCLDLKWNSRRSRTPYKAAGTRKIKTC 363
LR CV + SP K Q LG L L L W SRRSR+ +++ + K C
Sbjct: 762 LRNCVHARNNSPSK--QVPWILGTLLYDKCLASKSLALNWQSRRSRSK-RSSCLAQTKPC 818
Query: 364 GHIEKSHPLVEEAERSNAPRVNKIVQYSRRRFREKVSPLQACSKTRGFYEKQQSRDVFAN 543
IE+ ++P K++QYSRR+F+ K S F EK ++ N
Sbjct: 819 DSIERKKEDRFYGRIDDSPAEKKLLQYSRRKFKSKQRCFPVASMVSEFQEKSKNLSATLN 878
Query: 544 NE 549
+
Sbjct: 879 GD 880
>emb|CBI31438.3| unnamed protein product [Vitis vinifera]
Length = 1550
Score = 240 bits (613), Expect = 1e-60
Identities = 105/177 (59%), Positives = 130/177 (73%)
Frame = +1
Query: 1870 EDESSCNRFFKSPCEGLRPRTSRTATSVTGSGDXXXXXXXXXXXXQPSASAAGKEKKLKM 2049
ED+ + F +SPCEGLRPR + ++ + S K+KK
Sbjct: 1207 EDKFYFDSFIRSPCEGLRPRAKKDGSTGADTNKPVVEKPMAKTRKPADTSGPHKDKKENT 1266
Query: 2050 REVHRCDIENCEMSFKTRGLLIMHKRSKCTHKGCGKQFRSHKYAVLHQRVHVDERPLKCP 2229
+ HRCD+E C MSFKT+ L++HKR++C H+GCGK+F SHKYA+LHQRVH DERPLKCP
Sbjct: 1267 KGSHRCDLEGCRMSFKTKAELLLHKRNRCPHEGCGKKFSSHKYAMLHQRVHDDERPLKCP 1326
Query: 2230 WKGCTMSFKWAWARTEHLRVHTGERPYQCKIEGCDLTFRFVSDYSRHRRKTGHYVDS 2400
WKGC+MSFKWAWARTEH+RVHTG RPYQCK+EGC L+FRFVSD+SRHRRKTGHYV++
Sbjct: 1327 WKGCSMSFKWAWARTEHVRVHTGARPYQCKVEGCGLSFRFVSDFSRHRRKTGHYVNN 1383
Score = 163 bits (413), Expect = 2e-37
Identities = 89/192 (46%), Positives = 119/192 (61%), Gaps = 2/192 (1%)
Frame = +1
Query: 4 YSKIKAHALAVAEEVGVPFDCDEIPLHCASREDLNLXXXXXXXXEHEECGEDWTSRLGLN 183
Y KIKAHA VAEE+G PF+ +EIPL AS+EDLNL EH ECGEDWTS+LG+N
Sbjct: 737 YQKIKAHATTVAEEIGHPFNYNEIPLDTASQEDLNLINLAIDDEEHVECGEDWTSKLGIN 796
Query: 184 LRYCVQLKKLSPFKQDQHALALGGLFTSMFGGLDCLDLKWNSRRSRTPYKAAGTRKIK-- 357
L+YCV+++K SP KQ HALALGGLFT + L LKW SR+SR+ K+ IK
Sbjct: 797 LQYCVKIRKNSPSKQVPHALALGGLFTDTTSSSNFLSLKWQSRKSRSKLKSNLPSHIKPY 856
Query: 358 TCGHIEKSHPLVEEAERSNAPRVNKIVQYSRRRFREKVSPLQACSKTRGFYEKQQSRDVF 537
I++ + ++ S + +K++QYSRR F+ K + S+ RG K +DV
Sbjct: 857 ESNQIKEVEVMEGKSVGSTIRKEDKLIQYSRRIFKFKSGGAEGASRARGRPRKNLPKDVS 916
Query: 538 ANNEDVGNNVSR 573
A + D+ N+SR
Sbjct: 917 ATSCDIVKNISR 928
>ref|XP_002273747.1| PREDICTED: probable lysine-specific demethylase ELF6-like [Vitis
vinifera]
Length = 1415
Score = 240 bits (613), Expect = 1e-60
Identities = 105/177 (59%), Positives = 130/177 (73%)
Frame = +1
Query: 1870 EDESSCNRFFKSPCEGLRPRTSRTATSVTGSGDXXXXXXXXXXXXQPSASAAGKEKKLKM 2049
ED+ + F +SPCEGLRPR + ++ + S K+KK
Sbjct: 1236 EDKFYFDSFIRSPCEGLRPRAKKDGSTGADTNKPVVEKPMAKTRKPADTSGPHKDKKENT 1295
Query: 2050 REVHRCDIENCEMSFKTRGLLIMHKRSKCTHKGCGKQFRSHKYAVLHQRVHVDERPLKCP 2229
+ HRCD+E C MSFKT+ L++HKR++C H+GCGK+F SHKYA+LHQRVH DERPLKCP
Sbjct: 1296 KGSHRCDLEGCRMSFKTKAELLLHKRNRCPHEGCGKKFSSHKYAMLHQRVHDDERPLKCP 1355
Query: 2230 WKGCTMSFKWAWARTEHLRVHTGERPYQCKIEGCDLTFRFVSDYSRHRRKTGHYVDS 2400
WKGC+MSFKWAWARTEH+RVHTG RPYQCK+EGC L+FRFVSD+SRHRRKTGHYV++
Sbjct: 1356 WKGCSMSFKWAWARTEHVRVHTGARPYQCKVEGCGLSFRFVSDFSRHRRKTGHYVNN 1412
Score = 163 bits (413), Expect = 2e-37
Identities = 89/192 (46%), Positives = 119/192 (61%), Gaps = 2/192 (1%)
Frame = +1
Query: 4 YSKIKAHALAVAEEVGVPFDCDEIPLHCASREDLNLXXXXXXXXEHEECGEDWTSRLGLN 183
Y KIKAHA VAEE+G PF+ +EIPL AS+EDLNL EH ECGEDWTS+LG+N
Sbjct: 708 YQKIKAHATTVAEEIGHPFNYNEIPLDTASQEDLNLINLAIDDEEHVECGEDWTSKLGIN 767
Query: 184 LRYCVQLKKLSPFKQDQHALALGGLFTSMFGGLDCLDLKWNSRRSRTPYKAAGTRKIK-- 357
L+YCV+++K SP KQ HALALGGLFT + L LKW SR+SR+ K+ IK
Sbjct: 768 LQYCVKIRKNSPSKQVPHALALGGLFTDTTSSSNFLSLKWQSRKSRSKLKSNLPSHIKPY 827
Query: 358 TCGHIEKSHPLVEEAERSNAPRVNKIVQYSRRRFREKVSPLQACSKTRGFYEKQQSRDVF 537
I++ + ++ S + +K++QYSRR F+ K + S+ RG K +DV
Sbjct: 828 ESNQIKEVEVMEGKSVGSTIRKEDKLIQYSRRIFKFKSGGAEGASRARGRPRKNLPKDVS 887
Query: 538 ANNEDVGNNVSR 573
A + D+ N+SR
Sbjct: 888 ATSCDIVKNISR 899
>ref|XP_002315312.1| jumonji domain protein [Populus trichocarpa]
gi|222864352|gb|EEF01483.1| jumonji domain protein
[Populus trichocarpa]
Length = 749
Score = 238 bits (608), Expect = 5e-60
Identities = 122/265 (46%), Positives = 168/265 (63%), Gaps = 17/265 (6%)
Frame = +1
Query: 1648 VSDFANSVTEPSLSDSMVG--CSEEQELQVVEETYREGN---CSAKETM---------EL 1785
V+ AN V E S ++ V + + E+Q ET N CS+K + E+
Sbjct: 485 VAQMANVVVENSSINNEVSPPVTLDNEVQREIETKSRTNGDQCSSKSVVKCNEVCSSQEI 544
Query: 1786 EDSHLTVLDSHSSXXXXXXXXXXVDRIKEDESSCNRFFKSPCEGLRPRTSRTAT--SVTG 1959
E TV+D S+ V++ E++ + N F +SPCEGLRPR + AT S
Sbjct: 545 ESIESTVVDFRSNAGKGRKRKGEVEQPTENKLNSNGFIRSPCEGLRPRAGKDATCKSEVD 604
Query: 1960 SGDXXXXXXXXXXXXQPSASAAGKEKKLKM-REVHRCDIENCEMSFKTRGLLIMHKRSKC 2136
G +PS ++ + K+ ++ + H+C++E C MSF+T+ L +HKR++C
Sbjct: 605 VGKSAEENPVTKRSRKPSDASVPRPKRKEITKRSHKCNLEGCRMSFETKTELQLHKRNRC 664
Query: 2137 THKGCGKQFRSHKYAVLHQRVHVDERPLKCPWKGCTMSFKWAWARTEHLRVHTGERPYQC 2316
T+ GCGK+FRSHKYA++HQRVH D+RPLKCPWKGC+MSFKWAWAR EH+RVHTGE+PY C
Sbjct: 665 TYDGCGKKFRSHKYAIVHQRVHEDDRPLKCPWKGCSMSFKWAWARIEHIRVHTGEKPYLC 724
Query: 2317 KIEGCDLTFRFVSDYSRHRRKTGHY 2391
++EGC L+FRFVSD+SRHRRKTGHY
Sbjct: 725 RVEGCGLSFRFVSDFSRHRRKTGHY 749
Score = 147 bits (372), Expect = 1e-32
Identities = 85/209 (40%), Positives = 123/209 (58%), Gaps = 9/209 (4%)
Frame = +1
Query: 4 YSKIKAHALAVAEEVGVPFDCDEIPLHCASREDLNLXXXXXXXXEHEECGEDWTSRLGLN 183
Y KIKAHA A+AEE+ PF+ +E+PL AS+E+LNL +H ECGEDWTS+LG+N
Sbjct: 111 YQKIKAHAFAIAEEIENPFNYNEVPLEAASQENLNLINLAIDDEDHHECGEDWTSKLGIN 170
Query: 184 LRYCVQLKKLSPFKQDQHALALGGLFTSMFGGLDCLDLKWNSRRSRTPYKAAGTRKIKTC 363
LRYCV+++K SP K+ QHALALGGLF+ D L++KW SRRSR+ K K C
Sbjct: 171 LRYCVKIRKNSPSKKVQHALALGGLFSDRSLSSDFLNIKWQSRRSRSRIKFNQPVNCKPC 230
Query: 364 GHIE--KSHPLVEEAERSNAPRVNKIVQYSRRRFREKV----SPLQACSKTRGFYEKQQS 525
+E K L +++ + K++ Y+RR+++ K+ + L+ CS+ R E+
Sbjct: 231 KIMETNKDELLGNKSDGLTDKKEKKLIHYTRRKYKVKIDYSTNGLRRCSR-RCLAEEVSG 289
Query: 526 RDVFANNEDVGNNVSRDT---PCAIGTNG 603
+ +D + + T PC IG G
Sbjct: 290 ----TSGDDPDKHAEQTTVIYPCNIGITG 314