BLASTX nr result

ID: Coptis24_contig00016354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016354
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_199853.1| peptide-O-fucosyltransferase [Arabidopsis thali...    58   7e-07
gb|AAM66093.1| unknown [Arabidopsis thaliana]                          58   7e-07
ref|XP_003627474.1| GDP-fucose protein-O-fucosyltransferase [Med...    56   3e-06
ref|XP_003632783.1| PREDICTED: uncharacterized protein LOC100254...    55   5e-06
ref|XP_002865803.1| hypothetical protein ARALYDRAFT_918074 [Arab...    55   5e-06

>ref|NP_199853.1| peptide-O-fucosyltransferase [Arabidopsis thaliana]
           gi|9758924|dbj|BAB09461.1| unnamed protein product
           [Arabidopsis thaliana] gi|133778858|gb|ABO38769.1|
           At5g50420 [Arabidopsis thaliana]
           gi|332008558|gb|AED95941.1| peptide-O-fucosyltransferase
           [Arabidopsis thaliana]
          Length = 566

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/60 (45%), Positives = 39/60 (65%)
 Frame = +2

Query: 20  MLVEDFRSVVLKQIKVNKEVQQILLSSHRVGNVSEFLDANSMVVGYSGCRKADDGMGERR 199
           +L ED +S V KQI +NKE+Q++LLS HR  N S   D +S+   Y+ CRK D  + +R+
Sbjct: 148 VLFEDVKSAVSKQISLNKEIQEVLLSPHRSSNYSGGTDVDSVNFSYNRCRKVDQKLSDRK 207


>gb|AAM66093.1| unknown [Arabidopsis thaliana]
          Length = 566

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/60 (45%), Positives = 39/60 (65%)
 Frame = +2

Query: 20  MLVEDFRSVVLKQIKVNKEVQQILLSSHRVGNVSEFLDANSMVVGYSGCRKADDGMGERR 199
           +L ED +S V KQI +NKE+Q++LLS HR  N S   D +S+   Y+ CRK D  + +R+
Sbjct: 148 VLFEDVKSAVSKQISLNKEIQEVLLSPHRSSNYSGGTDVDSVNFSYNRCRKVDQKLSDRK 207


>ref|XP_003627474.1| GDP-fucose protein-O-fucosyltransferase [Medicago truncatula]
           gi|355521496|gb|AET01950.1| GDP-fucose
           protein-O-fucosyltransferase [Medicago truncatula]
          Length = 542

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
 Frame = +2

Query: 23  LVEDFRSVVLKQIKVNKEVQQILLSSHRVGNVSE----FLDANSMVVGYSGCRKADDGMG 190
           L+ED +S + KQI +N E+QQILL+ HR GNV +    F ++N  V  Y  CR  D  + 
Sbjct: 122 LIEDLKSALFKQISINNEIQQILLNPHRTGNVIDPEFNFGNSNFNVGNYDRCRTVDQSLS 181

Query: 191 ERR 199
           +R+
Sbjct: 182 KRK 184


>ref|XP_003632783.1| PREDICTED: uncharacterized protein LOC100254979 isoform 2 [Vitis
           vinifera]
          Length = 603

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
 Frame = +2

Query: 32  DFRSVVLKQIKVNKEVQQILLSSHRVGNVSEFLDANSMV----VGYSGCRKADDGMGER 196
           DF+S +LKQI +NKE+QQ+LLSSH  GN+SE +D N  +      ++ C K +  M +R
Sbjct: 143 DFKSALLKQISLNKEIQQVLLSSHPSGNLSELVDDNGDLNFGAYSFNRCPKVNQNMSQR 201


>ref|XP_002865803.1| hypothetical protein ARALYDRAFT_918074 [Arabidopsis lyrata subsp.
           lyrata] gi|297311638|gb|EFH42062.1| hypothetical protein
           ARALYDRAFT_918074 [Arabidopsis lyrata subsp. lyrata]
          Length = 566

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/60 (43%), Positives = 37/60 (61%)
 Frame = +2

Query: 20  MLVEDFRSVVLKQIKVNKEVQQILLSSHRVGNVSEFLDANSMVVGYSGCRKADDGMGERR 199
           +L ED +S V KQI +NKE+Q +LLS HR  N S   + +S+   Y  CRK D  + +R+
Sbjct: 148 VLFEDVKSAVSKQISLNKEIQNVLLSPHRSSNYSGGTEVDSVNFSYDRCRKVDQKLSDRK 207


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