BLASTX nr result

ID: Coptis24_contig00016335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016335
         (1763 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN40367.1| unknown [Picea sitchensis]                              56   9e-09
ref|XP_001785695.1| predicted protein [Physcomitrella patens sub...    57   4e-08
gb|AAR85321.1| 24-sterol-C-methyltransferase [Morus alba]              62   6e-07
gb|AAB62812.1| S-adenosyl-methionine-sterol-C- methyltransferase...    60   2e-06
ref|XP_002517794.1| s-adenosyl-l-methionine:delta24-sterol-C-met...    60   2e-06

>gb|ACN40367.1| unknown [Picea sitchensis]
          Length = 348

 Score = 55.8 bits (133), Expect(2) = 9e-09
 Identities = 28/50 (56%), Positives = 34/50 (68%)
 Frame = -3

Query: 273 ENLI*EDFDEGSLVPCYLPLDKSHFSLTGFRLTSIGRFFTRNMVDIIDSL 124
           E L  E+    S VP Y PLD SHFSL+ FRLT++GR  TRNMV I++ L
Sbjct: 252 EVLFEENLTVSSTVPWYAPLDTSHFSLSSFRLTALGRLLTRNMVRILEFL 301



 Score = 32.0 bits (71), Expect(2) = 9e-09
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = -1

Query: 455 AEIELGYGIPDIVLTRQCLES 393
           AEIELG G+PDI  T QC E+
Sbjct: 225 AEIELGDGLPDIRTTNQCFEA 245


>ref|XP_001785695.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162662665|gb|EDQ49490.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 346

 Score = 56.6 bits (135), Expect(2) = 4e-08
 Identities = 28/50 (56%), Positives = 36/50 (72%)
 Frame = -3

Query: 273 ENLI*EDFDEGSLVPCYLPLDKSHFSLTGFRLTSIGRFFTRNMVDIIDSL 124
           E L+ ED  + S VP Y PLD +HFSL+  RLT IGRFFT NMV ++++L
Sbjct: 252 EILMEEDLAKHSQVPWYQPLDPNHFSLSTLRLTPIGRFFTHNMVRVLEAL 301



 Score = 28.9 bits (63), Expect(2) = 4e-08
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = -1

Query: 452 EIELGYGIPDIVLTRQCLES 393
           EIELG G+PDI  TRQ L++
Sbjct: 226 EIELGNGLPDIRSTRQVLQA 245


>gb|AAR85321.1| 24-sterol-C-methyltransferase [Morus alba]
          Length = 131

 Score = 61.6 bits (148), Expect = 6e-07
 Identities = 27/45 (60%), Positives = 36/45 (80%)
 Frame = -3

Query: 258 EDFDEGSLVPCYLPLDKSHFSLTGFRLTSIGRFFTRNMVDIIDSL 124
           +D   GS VP YLPLDKSHFSL+ FRLT++GRF T+NMV  ++++
Sbjct: 66  KDLAAGSPVPWYLPLDKSHFSLSSFRLTAVGRFITKNMVKALEAI 110


>gb|AAB62812.1| S-adenosyl-methionine-sterol-C- methyltransferase [Ricinus
           communis]
          Length = 346

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 27/42 (64%), Positives = 33/42 (78%)
 Frame = -3

Query: 255 DFDEGSLVPCYLPLDKSHFSLTGFRLTSIGRFFTRNMVDIID 130
           D    S VP YLPLDK+ +SLTGFRLT+IGRFFTRNM+  ++
Sbjct: 257 DLTASSPVPWYLPLDKNQYSLTGFRLTAIGRFFTRNMIKALE 298


>ref|XP_002517794.1| s-adenosyl-l-methionine:delta24-sterol-C-methyltransferase,
           putative [Ricinus communis] gi|223543066|gb|EEF44601.1|
           s-adenosyl-l-methionine:delta24-sterol-C-
           methyltransferase, putative [Ricinus communis]
          Length = 346

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 27/42 (64%), Positives = 33/42 (78%)
 Frame = -3

Query: 255 DFDEGSLVPCYLPLDKSHFSLTGFRLTSIGRFFTRNMVDIID 130
           D    S VP YLPLDK+ +SLTGFRLT+IGRFFTRNM+  ++
Sbjct: 257 DLTASSPVPWYLPLDKNQYSLTGFRLTAIGRFFTRNMIKALE 298


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