BLASTX nr result
ID: Coptis24_contig00016321
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00016321
(292 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279515.2| PREDICTED: flowering time control protein FC... 135 3e-30
emb|CBI22860.3| unnamed protein product [Vitis vinifera] 135 3e-30
gb|ADB44797.1| FCA [Vitis vinifera] 134 6e-30
ref|XP_003550740.1| PREDICTED: flowering time control protein FC... 131 5e-29
ref|XP_002519252.1| Flowering time control protein FCA, putative... 131 5e-29
>ref|XP_002279515.2| PREDICTED: flowering time control protein FCA [Vitis vinifera]
Length = 785
Score = 135 bits (341), Expect = 3e-30
Identities = 64/105 (60%), Positives = 79/105 (75%), Gaps = 9/105 (8%)
Frame = -2
Query: 288 PFLDRKRPFPFS---------DNGGYVKLYVGSIPRTASADDVGPFFEEYGKVLEVFIMK 136
P +KR F F D GG+ KL+VGS+PRTA+ +D+ P FEE+G VLEV ++K
Sbjct: 92 PLSGQKRGFGFPGRGGSPDRYDGGGFAKLFVGSVPRTATEEDIRPLFEEHGNVLEVALIK 151
Query: 135 DKRSGQQQGCCFVKYETLEEAERAMKALHNQYTFPGELGPIQVRY 1
DKR+GQQQGCCF+KY T EEAERA++ALHNQYT PG +GPIQVRY
Sbjct: 152 DKRTGQQQGCCFIKYATSEEAERAIRALHNQYTLPGGVGPIQVRY 196
Score = 56.2 bits (134), Expect = 3e-06
Identities = 30/78 (38%), Positives = 48/78 (61%)
Frame = -2
Query: 234 KLYVGSIPRTASADDVGPFFEEYGKVLEVFIMKDKRSGQQQGCCFVKYETLEEAERAMKA 55
KL+VGS+ + A+ +V F YG+V +V++M+D+ Q +GC FVK+ + A A+ A
Sbjct: 210 KLFVGSLNKQATEKEVKEIFSPYGQVEDVYLMRDELK-QSRGCGFVKFSHRDMAMAAINA 268
Query: 54 LHNQYTFPGELGPIQVRY 1
L+ YT G P+ VR+
Sbjct: 269 LNGIYTMRGCDQPLTVRF 286
>emb|CBI22860.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 135 bits (341), Expect = 3e-30
Identities = 64/105 (60%), Positives = 79/105 (75%), Gaps = 9/105 (8%)
Frame = -2
Query: 288 PFLDRKRPFPFS---------DNGGYVKLYVGSIPRTASADDVGPFFEEYGKVLEVFIMK 136
P +KR F F D GG+ KL+VGS+PRTA+ +D+ P FEE+G VLEV ++K
Sbjct: 15 PLSGQKRGFGFPGRGGSPDRYDGGGFAKLFVGSVPRTATEEDIRPLFEEHGNVLEVALIK 74
Query: 135 DKRSGQQQGCCFVKYETLEEAERAMKALHNQYTFPGELGPIQVRY 1
DKR+GQQQGCCF+KY T EEAERA++ALHNQYT PG +GPIQVRY
Sbjct: 75 DKRTGQQQGCCFIKYATSEEAERAIRALHNQYTLPGGVGPIQVRY 119
Score = 56.2 bits (134), Expect = 3e-06
Identities = 30/78 (38%), Positives = 48/78 (61%)
Frame = -2
Query: 234 KLYVGSIPRTASADDVGPFFEEYGKVLEVFIMKDKRSGQQQGCCFVKYETLEEAERAMKA 55
KL+VGS+ + A+ +V F YG+V +V++M+D+ Q +GC FVK+ + A A+ A
Sbjct: 133 KLFVGSLNKQATEKEVKEIFSPYGQVEDVYLMRDELK-QSRGCGFVKFSHRDMAMAAINA 191
Query: 54 LHNQYTFPGELGPIQVRY 1
L+ YT G P+ VR+
Sbjct: 192 LNGIYTMRGCDQPLTVRF 209
>gb|ADB44797.1| FCA [Vitis vinifera]
Length = 281
Score = 134 bits (338), Expect = 6e-30
Identities = 63/105 (60%), Positives = 79/105 (75%), Gaps = 9/105 (8%)
Frame = -2
Query: 288 PFLDRKRPFPFS---------DNGGYVKLYVGSIPRTASADDVGPFFEEYGKVLEVFIMK 136
P +KR F F D GG+ KL+VGS+PRTA+ +D+ P FEE+G VLEV ++K
Sbjct: 76 PLSGQKRGFGFPGRGGSPDRYDGGGFAKLFVGSVPRTATEEDIRPLFEEHGNVLEVALIK 135
Query: 135 DKRSGQQQGCCFVKYETLEEAERAMKALHNQYTFPGELGPIQVRY 1
DKR+GQQQGCCF+KY T EEAERA++ALHNQYT PG +GPI+VRY
Sbjct: 136 DKRTGQQQGCCFIKYATSEEAERAIRALHNQYTLPGGVGPIEVRY 180
Score = 54.7 bits (130), Expect = 8e-06
Identities = 29/78 (37%), Positives = 47/78 (60%)
Frame = -2
Query: 234 KLYVGSIPRTASADDVGPFFEEYGKVLEVFIMKDKRSGQQQGCCFVKYETLEEAERAMKA 55
KL+VGS+ + A+ +V F YG+V +V++M+D+ Q +GC FV + + A A+ A
Sbjct: 194 KLFVGSLNKQATEKEVKEIFSPYGQVEDVYLMRDELK-QSRGCGFVNFSHRDMAMAAINA 252
Query: 54 LHNQYTFPGELGPIQVRY 1
L+ YT G P+ VR+
Sbjct: 253 LNGIYTMKGCDQPLTVRF 270
>ref|XP_003550740.1| PREDICTED: flowering time control protein FCA-like [Glycine max]
Length = 733
Score = 131 bits (330), Expect = 5e-29
Identities = 60/106 (56%), Positives = 79/106 (74%), Gaps = 10/106 (9%)
Frame = -2
Query: 288 PFLDRKRPFPFS----------DNGGYVKLYVGSIPRTASADDVGPFFEEYGKVLEVFIM 139
P +KR FPFS D G + KL+VGS+PRTAS +D+ P FEE+G V+EV ++
Sbjct: 59 PLAGQKRGFPFSGRGGGSPDRLDGGSFAKLFVGSVPRTASEEDIRPLFEEHGNVIEVALI 118
Query: 138 KDKRSGQQQGCCFVKYETLEEAERAMKALHNQYTFPGELGPIQVRY 1
KDK++GQ QGCCF+KY T EEA++A++ALHNQ+T PG +GPIQVRY
Sbjct: 119 KDKKTGQHQGCCFIKYATSEEADQAIRALHNQHTLPGGVGPIQVRY 164
Score = 60.1 bits (144), Expect = 2e-07
Identities = 31/78 (39%), Positives = 50/78 (64%)
Frame = -2
Query: 234 KLYVGSIPRTASADDVGPFFEEYGKVLEVFIMKDKRSGQQQGCCFVKYETLEEAERAMKA 55
KL+VGS+ + A+ +V F +YG+V +V++M+D++ Q +GC FVKY + A A+ A
Sbjct: 178 KLFVGSLNKQATVKEVEEIFSKYGRVEDVYLMRDEKK-QSRGCGFVKYSHRDMALAAINA 236
Query: 54 LHNQYTFPGELGPIQVRY 1
L+ YT G P+ VR+
Sbjct: 237 LNGIYTMRGCEQPLIVRF 254
>ref|XP_002519252.1| Flowering time control protein FCA, putative [Ricinus communis]
gi|223541567|gb|EEF43116.1| Flowering time control
protein FCA, putative [Ricinus communis]
Length = 811
Score = 131 bits (330), Expect = 5e-29
Identities = 61/105 (58%), Positives = 79/105 (75%), Gaps = 9/105 (8%)
Frame = -2
Query: 288 PFLDRKRPFPFSDNGG---------YVKLYVGSIPRTASADDVGPFFEEYGKVLEVFIMK 136
P +KR FPFS G + KL+VGS+PRTAS +D+ P FE++G V+EV ++K
Sbjct: 135 PLSGQKRGFPFSGRGNSPDHTECGSFAKLFVGSVPRTASEEDIRPLFEQHGNVIEVALIK 194
Query: 135 DKRSGQQQGCCFVKYETLEEAERAMKALHNQYTFPGELGPIQVRY 1
DKR+GQQQGCCFVKY T EEA+RA++ALHNQ+T PG +GPIQVR+
Sbjct: 195 DKRTGQQQGCCFVKYATSEEADRAIRALHNQHTLPGGIGPIQVRF 239
Score = 57.0 bits (136), Expect = 2e-06
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = -2
Query: 234 KLYVGSIPRTASADDVGPFFEEYGKVLEVFIMKDKRSGQQQGCCFVKYETLEEAERAMKA 55
KL+VGS+ + A+ +V F YG V +V++M+D+ Q +GC FVKY + E A A+ A
Sbjct: 253 KLFVGSLNKQATEKEVEEIFSPYGHVEDVYLMRDEMK-QSRGCGFVKYSSREMALAAINA 311
Query: 54 LHNQYTFPGELGPIQVRY 1
L+ Y G P+ VR+
Sbjct: 312 LNGIYKMRGCDQPLTVRF 329