BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016315
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_974171.1| uncharacterized transmembrane protein [Arabidop...   104   1e-28
gb|AAM64662.1| unknown [Arabidopsis thaliana]                         104   1e-28
ref|NP_565184.1| uncharacterized transmembrane protein [Arabidop...   104   1e-28
ref|XP_002889202.1| integral membrane family protein [Arabidopsi...   105   2e-28
ref|XP_002317441.1| predicted protein [Populus trichocarpa] gi|2...   110   3e-28

>ref|NP_974171.1| uncharacterized transmembrane protein [Arabidopsis thaliana]
           gi|332198008|gb|AEE36129.1| uncharacterized
           transmembrane protein [Arabidopsis thaliana]
          Length = 342

 Score =  104 bits (260), Expect(2) = 1e-28
 Identities = 49/67 (73%), Positives = 58/67 (86%)
 Frame = +3

Query: 3   PRGTEGAVSVEGTIAGLLASILLAYVGCLVGEVNAVEAAICVVASQIANLGESMIGAILQ 182
           PRGTEGA+S+EGT+AGLLAS  LA VGC +G++   EAA+CV+ASQIANLGES+IGA  Q
Sbjct: 245 PRGTEGAMSLEGTLAGLLASFFLASVGCFLGQITPPEAAVCVLASQIANLGESIIGASFQ 304

Query: 183 DKEGFKW 203
           DKEGFKW
Sbjct: 305 DKEGFKW 311



 Score = 46.6 bits (109), Expect(2) = 1e-28
 Identities = 20/29 (68%), Positives = 25/29 (86%)
 Frame = +2

Query: 203 VNNDAVNVINISLGSILAVLIHQTVTQNW 289
           +NND VNVINISLGSI+A+L+ Q + QNW
Sbjct: 312 LNNDVVNVINISLGSIVAILMQQFILQNW 340


>gb|AAM64662.1| unknown [Arabidopsis thaliana]
          Length = 333

 Score =  104 bits (260), Expect(2) = 1e-28
 Identities = 49/67 (73%), Positives = 58/67 (86%)
 Frame = +3

Query: 3   PRGTEGAVSVEGTIAGLLASILLAYVGCLVGEVNAVEAAICVVASQIANLGESMIGAILQ 182
           PRGTEGA+S+EGT+AGLLAS  LA VGC +G++   EAA+CV+ASQIANLGES+IGA  Q
Sbjct: 236 PRGTEGAMSLEGTLAGLLASFFLASVGCFLGQITPPEAAVCVLASQIANLGESIIGASFQ 295

Query: 183 DKEGFKW 203
           DKEGFKW
Sbjct: 296 DKEGFKW 302



 Score = 46.6 bits (109), Expect(2) = 1e-28
 Identities = 20/29 (68%), Positives = 25/29 (86%)
 Frame = +2

Query: 203 VNNDAVNVINISLGSILAVLIHQTVTQNW 289
           +NND VNVINISLGSI+A+L+ Q + QNW
Sbjct: 303 LNNDVVNVINISLGSIVAILMQQFILQNW 331


>ref|NP_565184.1| uncharacterized transmembrane protein [Arabidopsis thaliana]
           gi|4836871|gb|AAD30574.1|AC007260_5 Unknown protein
           [Arabidopsis thaliana] gi|14334658|gb|AAK59507.1|
           unknown protein [Arabidopsis thaliana]
           gi|17104591|gb|AAL34184.1| unknown protein [Arabidopsis
           thaliana] gi|332198007|gb|AEE36128.1| uncharacterized
           transmembrane protein [Arabidopsis thaliana]
          Length = 333

 Score =  104 bits (260), Expect(2) = 1e-28
 Identities = 49/67 (73%), Positives = 58/67 (86%)
 Frame = +3

Query: 3   PRGTEGAVSVEGTIAGLLASILLAYVGCLVGEVNAVEAAICVVASQIANLGESMIGAILQ 182
           PRGTEGA+S+EGT+AGLLAS  LA VGC +G++   EAA+CV+ASQIANLGES+IGA  Q
Sbjct: 236 PRGTEGAMSLEGTLAGLLASFFLASVGCFLGQITPPEAAVCVLASQIANLGESIIGASFQ 295

Query: 183 DKEGFKW 203
           DKEGFKW
Sbjct: 296 DKEGFKW 302



 Score = 46.6 bits (109), Expect(2) = 1e-28
 Identities = 20/29 (68%), Positives = 25/29 (86%)
 Frame = +2

Query: 203 VNNDAVNVINISLGSILAVLIHQTVTQNW 289
           +NND VNVINISLGSI+A+L+ Q + QNW
Sbjct: 303 LNNDVVNVINISLGSIVAILMQQFILQNW 331


>ref|XP_002889202.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335043|gb|EFH65461.1| integral membrane family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 334

 Score =  105 bits (262), Expect(2) = 2e-28
 Identities = 49/67 (73%), Positives = 58/67 (86%)
 Frame = +3

Query: 3   PRGTEGAVSVEGTIAGLLASILLAYVGCLVGEVNAVEAAICVVASQIANLGESMIGAILQ 182
           PRGTEGA+S+EGT+AGLLAS  LA VGC +G++   EAA+CV+ASQIANLGES+IGA  Q
Sbjct: 237 PRGTEGAMSIEGTLAGLLASFFLASVGCFLGQITPPEAAVCVLASQIANLGESIIGASFQ 296

Query: 183 DKEGFKW 203
           DKEGFKW
Sbjct: 297 DKEGFKW 303



 Score = 45.1 bits (105), Expect(2) = 2e-28
 Identities = 19/29 (65%), Positives = 24/29 (82%)
 Frame = +2

Query: 203 VNNDAVNVINISLGSILAVLIHQTVTQNW 289
           +NND VNVINISLGSI+A+ + Q + QNW
Sbjct: 304 LNNDVVNVINISLGSIVAIFMQQFILQNW 332


>ref|XP_002317441.1| predicted protein [Populus trichocarpa] gi|222860506|gb|EEE98053.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  110 bits (274), Expect(2) = 3e-28
 Identities = 51/67 (76%), Positives = 61/67 (91%)
 Frame = +3

Query: 3   PRGTEGAVSVEGTIAGLLASILLAYVGCLVGEVNAVEAAICVVASQIANLGESMIGAILQ 182
           PRGTEGAVS EGT+AGLLASILLA +GC++GE+NA EA ICV+ASQIAN+GES+IGA  Q
Sbjct: 179 PRGTEGAVSAEGTLAGLLASILLASIGCILGEINAPEAVICVIASQIANVGESIIGAAFQ 238

Query: 183 DKEGFKW 203
           +KEGF+W
Sbjct: 239 EKEGFQW 245



 Score = 40.0 bits (92), Expect(2) = 3e-28
 Identities = 19/23 (82%), Positives = 22/23 (95%)
 Frame = +2

Query: 203 VNNDAVNVINISLGSILAVLIHQ 271
           +NNDAVNVINIS+GSILAVL+ Q
Sbjct: 246 LNNDAVNVINISVGSILAVLMQQ 268