BLASTX nr result

ID: Coptis24_contig00016314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016314
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]            92   6e-17
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]    91   7e-17
emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera]    91   7e-17
emb|CAN78912.1| hypothetical protein VITISV_004522 [Vitis vinifera]    90   2e-16
emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]    89   3e-16

>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 43/68 (63%), Positives = 51/68 (75%)
 Frame = -3

Query: 274  QSAIHLSKNPSFHSKSEHIKVRYHWIRDVXXXXXXXXXKVHTDKNGSDMMTKALPKGKHE 95
            QSAIHL+KN SFHS+S+HI VRY+WIRDV         K+HTD+NGSDM+TK LPKGK E
Sbjct: 1259 QSAIHLAKNASFHSRSKHIDVRYNWIRDVLEKKMLRLEKIHTDENGSDMLTKTLPKGKFE 1318

Query: 94   VCCSIAGL 71
             C   AG+
Sbjct: 1319 FCREAAGI 1326


>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
          Length = 1362

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 41/68 (60%), Positives = 51/68 (75%)
 Frame = -3

Query: 274  QSAIHLSKNPSFHSKSEHIKVRYHWIRDVXXXXXXXXXKVHTDKNGSDMMTKALPKGKHE 95
            QSAIHLSKN ++H++S+HI VRYHW+RD          K+HTD NGSDM+TK LP+ K  
Sbjct: 1229 QSAIHLSKNSTYHARSKHIDVRYHWMRDALNDNLFEIEKIHTDNNGSDMLTKTLPREKLG 1288

Query: 94   VCCSIAGL 71
            VCCSIAG+
Sbjct: 1289 VCCSIAGM 1296


>emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera]
          Length = 1204

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 41/68 (60%), Positives = 51/68 (75%)
 Frame = -3

Query: 274  QSAIHLSKNPSFHSKSEHIKVRYHWIRDVXXXXXXXXXKVHTDKNGSDMMTKALPKGKHE 95
            QSAIHLSKN ++H++S+HI VRYHW+RD          K+HTD NGSDM+TK LP+ K  
Sbjct: 1075 QSAIHLSKNSTYHARSKHIDVRYHWMRDALNDNLFEIEKIHTDNNGSDMLTKTLPREKLG 1134

Query: 94   VCCSIAGL 71
            VCCSIAG+
Sbjct: 1135 VCCSIAGM 1142


>emb|CAN78912.1| hypothetical protein VITISV_004522 [Vitis vinifera]
          Length = 882

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 41/68 (60%), Positives = 51/68 (75%)
 Frame = -3

Query: 274  QSAIHLSKNPSFHSKSEHIKVRYHWIRDVXXXXXXXXXKVHTDKNGSDMMTKALPKGKHE 95
            QS IHLSKN +FH++S+HI VRYHW+RDV         K+HTD NGSDM+TK+L + K E
Sbjct: 810  QSVIHLSKNSTFHARSKHIDVRYHWMRDVLNDNLFELEKIHTDHNGSDMLTKSLLREKLE 869

Query: 94   VCCSIAGL 71
            VCCSI G+
Sbjct: 870  VCCSIVGM 877


>emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]
          Length = 1317

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 40/68 (58%), Positives = 50/68 (73%)
 Frame = -3

Query: 274  QSAIHLSKNPSFHSKSEHIKVRYHWIRDVXXXXXXXXXKVHTDKNGSDMMTKALPKGKHE 95
            Q+AIHLSKN  +H++S+HI VRYHW+RD          K+HTD NGSDM+TK LP+ K  
Sbjct: 1188 QNAIHLSKNSXYHARSKHIDVRYHWMRDALNNNLFEIEKIHTDNNGSDMLTKTLPREKLG 1247

Query: 94   VCCSIAGL 71
            VCCSIAG+
Sbjct: 1248 VCCSIAGM 1255


Top