BLASTX nr result

ID: Coptis24_contig00016313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016313
         (1103 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE61612.1| hypothetical protein OsJ_16029 [Oryza sativa Japo...   263   7e-68
ref|XP_002454431.1| hypothetical protein SORBIDRAFT_04g030830 [S...   262   1e-67
gb|EEC77922.1| hypothetical protein OsI_17252 [Oryza sativa Indi...   262   1e-67
ref|XP_003570169.1| PREDICTED: myb family transcription factor A...   260   5e-67
dbj|BAD07516.1| phosphate starvation response regulator-like [Or...   256   7e-66

>gb|EEE61612.1| hypothetical protein OsJ_16029 [Oryza sativa Japonica Group]
          Length = 279

 Score =  263 bits (671), Expect = 7e-68
 Identities = 143/273 (52%), Positives = 178/273 (65%), Gaps = 4/273 (1%)
 Frame = +3

Query: 168 SGGIVLSRDPKPRLRWTAELHDRFVDAVTKLGGPDKATPKSVLRVMGLKGLTLYHLKSHL 347
           S     +RDPKPRLRWT +LH+RFVDAVT+LGGPDKATPKSVLR+MG+KGLTLYHLKSHL
Sbjct: 11  SAAAAAARDPKPRLRWTPDLHERFVDAVTRLGGPDKATPKSVLRLMGMKGLTLYHLKSHL 70

Query: 348 QKYRLGKQAQRETSLDQSKDSAGSSEDRSYMNYQSATSAIAPRVNNEGEFQITENLRYQI 527
           QKYRLG+Q+++   L+ +   +G            A        NN GE  + + L+YQ+
Sbjct: 71  QKYRLGRQSKKSAGLELAVADSGEFTAEGISFSIGAPPRNPAGGNNTGEIPLADALKYQV 130

Query: 528 DVQRKLQEQLEVQRKLQTRIEAQGKYLQAILEKAQKSLSADLNNSEHLEATRDQLTDFNL 707
           +VQRKLQEQLEVQ+KLQ RIEAQG+YL+ ILEKAQK++S D N S +L +TR Q+TD NL
Sbjct: 131 EVQRKLQEQLEVQKKLQMRIEAQGRYLKEILEKAQKNISLDANGSANLSSTRSQITDINL 190

Query: 708 ALSGLMENMTQVNEE--ERKEDTTEKNTCQYKKVHSSAFQLYHXXXXXXXXXXXXXXXXX 881
           ALSG M+N TQV EE  E  +  ++ N     KV++  FQLYH                 
Sbjct: 191 ALSGFMDNATQVQEENNELMKPISDDNL----KVNNLGFQLYHLGSQESKDVKCTPKTEE 246

Query: 882 SFLFDLNINGNYEFN--GANGSEFDTKIHTERR 974
             L DLNI G YE +  G  G E D KI+ +RR
Sbjct: 247 LLLLDLNIQGGYELSSRGMQGCELDLKINQQRR 279


>ref|XP_002454431.1| hypothetical protein SORBIDRAFT_04g030830 [Sorghum bicolor]
           gi|241934262|gb|EES07407.1| hypothetical protein
           SORBIDRAFT_04g030830 [Sorghum bicolor]
          Length = 279

 Score =  262 bits (670), Expect = 1e-67
 Identities = 141/252 (55%), Positives = 174/252 (69%), Gaps = 2/252 (0%)
 Frame = +3

Query: 171 GGIVLSRDPKPRLRWTAELHDRFVDAVTKLGGPDKATPKSVLRVMGLKGLTLYHLKSHLQ 350
           GG+VLSRDPKPRLRWT +LH+RFV+AVTKLGGPDKATPKSVLR+MG+KGLTLYHLKSHLQ
Sbjct: 19  GGVVLSRDPKPRLRWTPDLHERFVEAVTKLGGPDKATPKSVLRLMGMKGLTLYHLKSHLQ 78

Query: 351 KYRLGKQAQRETSLDQSKDSAGSSEDRSYMNYQSATSAIAPRV--NNEGEFQITENLRYQ 524
           KYRLGKQ++++T L+ S+ +  +      +N+ +      P    NN GE  + + L+YQ
Sbjct: 79  KYRLGKQSKKDTGLEASRGAFAAQG----INFSTPVPPSIPSTASNNTGETPLADALKYQ 134

Query: 525 IDVQRKLQEQLEVQRKLQTRIEAQGKYLQAILEKAQKSLSADLNNSEHLEATRDQLTDFN 704
           I+VQRKL EQLEVQ+KLQ RIEAQGKYLQ ILEKAQ +LS D     +LEATR QLTDFN
Sbjct: 135 IEVQRKLHEQLEVQKKLQMRIEAQGKYLQTILEKAQSNLSYDATGGANLEATRSQLTDFN 194

Query: 705 LALSGLMENMTQVNEEERKEDTTEKNTCQYKKVHSSAFQLYHXXXXXXXXXXXXXXXXXS 884
           LALSG M+N+TQV E++  E     +    +  ++  FQLYH                  
Sbjct: 195 LALSGFMDNVTQVCEQKNGELAKAMSEDGLRASNNLGFQLYHHGVQDRDDVKCATDEGL- 253

Query: 885 FLFDLNINGNYE 920
            L DLNI G Y+
Sbjct: 254 LLLDLNIRGGYD 265


>gb|EEC77922.1| hypothetical protein OsI_17252 [Oryza sativa Indica Group]
          Length = 282

 Score =  262 bits (669), Expect = 1e-67
 Identities = 142/267 (53%), Positives = 177/267 (66%), Gaps = 4/267 (1%)
 Frame = +3

Query: 186 SRDPKPRLRWTAELHDRFVDAVTKLGGPDKATPKSVLRVMGLKGLTLYHLKSHLQKYRLG 365
           +RDPKPRLRWT +LH+RFVDAVT+LGGPDKATPKSVLR+MG+KGLTLYHLKSHLQKYRLG
Sbjct: 20  TRDPKPRLRWTPDLHERFVDAVTRLGGPDKATPKSVLRLMGMKGLTLYHLKSHLQKYRLG 79

Query: 366 KQAQRETSLDQSKDSAGSSEDRSYMNYQSATSAIAPRVNNEGEFQITENLRYQIDVQRKL 545
           +Q+++   L+ +   +G            A        NN GE  + + L+YQ++VQRKL
Sbjct: 80  RQSKKSAGLELAVADSGEFTAEGISFSIGAPPRNPAGGNNTGEIPLADALKYQVEVQRKL 139

Query: 546 QEQLEVQRKLQTRIEAQGKYLQAILEKAQKSLSADLNNSEHLEATRDQLTDFNLALSGLM 725
           QEQLEVQ+KLQ RIEAQG+YL+ ILEKAQK++S D N S +L +TR Q+TD NLALSG M
Sbjct: 140 QEQLEVQKKLQMRIEAQGRYLKEILEKAQKNISLDANGSANLSSTRSQITDINLALSGFM 199

Query: 726 ENMTQVNEE--ERKEDTTEKNTCQYKKVHSSAFQLYHXXXXXXXXXXXXXXXXXSFLFDL 899
           +N TQV EE  E  +  ++ N     KV++  FQLYH                   L DL
Sbjct: 200 DNATQVQEENNELMKPISDDNL----KVNNLGFQLYHLGSQESKDVKCTPKTEELLLLDL 255

Query: 900 NINGNYEFN--GANGSEFDTKIHTERR 974
           NI G YE +  G  G E D KI+ +RR
Sbjct: 256 NIQGGYELSSRGMQGCELDLKINQQRR 282


>ref|XP_003570169.1| PREDICTED: myb family transcription factor APL-like [Brachypodium
           distachyon]
          Length = 281

 Score =  260 bits (664), Expect = 5e-67
 Identities = 147/278 (52%), Positives = 186/278 (66%), Gaps = 9/278 (3%)
 Frame = +3

Query: 168 SGGIVLSRDPKPRLRWTAELHDRFVDAVTKLGGPDKATPKSVLRVMGLKGLTLYHLKSHL 347
           +GG+VLSRDPKPRLRWT +LH+RFV+AVTKLGGPDKATPKSVLR+MG+KGLTLYHLKSHL
Sbjct: 14  AGGVVLSRDPKPRLRWTPDLHERFVEAVTKLGGPDKATPKSVLRLMGMKGLTLYHLKSHL 73

Query: 348 QKYRLGKQAQRETSLDQSKDSAGSSEDRSYMNYQSATSAIAPRV--NNEGEFQITENLRY 521
           QKYR+GKQ++++T  + S+ +  +      +++ SAT  + P    NN GE  + + LRY
Sbjct: 74  QKYRMGKQSKKDTGFETSRAAFATHG----ISFSSATPPVVPSAGNNNMGETPLADALRY 129

Query: 522 QIDVQRKLQEQLEVQRKLQTRIEAQGKYLQAILEKAQKSLSADLNNSEHLEATRDQLTDF 701
           QI+VQRKL EQLEVQ+KLQ RIEAQGKYLQ ILEKAQK+L+ D + + +LEATR QLTDF
Sbjct: 130 QIEVQRKLHEQLEVQKKLQMRIEAQGKYLQTILEKAQKNLTYDSSAATNLEATRSQLTDF 189

Query: 702 NLALSGLMENMTQV---NEEERKEDTTEKNTCQYKKVHSSAFQLYHXXXXXXXXXXXXXX 872
           NLALSG M++ TQV   N  E  +  +E N     +  +  FQLYH              
Sbjct: 190 NLALSGFMDDATQVCEQNNGELAKVISEDNL----RAGNLGFQLYHGVQDAEDVKCTADE 245

Query: 873 XXXSFLFDLNINGNYEF----NGANGSEFDTKIHTERR 974
                L DLNI G Y+     +G    + D  +   RR
Sbjct: 246 DL--LLLDLNIKGGYDHRLSSHGMRRGDADLTVGQHRR 281


>dbj|BAD07516.1| phosphate starvation response regulator-like [Oryza sativa Japonica
           Group] gi|41052977|dbj|BAD07887.1| phosphate starvation
           response regulator-like [Oryza sativa Japonica Group]
           gi|125583365|gb|EAZ24296.1| hypothetical protein
           OsJ_08048 [Oryza sativa Japonica Group]
          Length = 284

 Score =  256 bits (654), Expect = 7e-66
 Identities = 149/279 (53%), Positives = 180/279 (64%), Gaps = 9/279 (3%)
 Frame = +3

Query: 165 MSGGIVLSRDPKPRLRWTAELHDRFVDAVTKLGGPDKATPKSVLRVMGLKGLTLYHLKSH 344
           +  G+VLSRDPKPRLRWT +LH+RFV+AVTKLGGPDKATPKSVLR+MG+KGLTLYHLKSH
Sbjct: 16  VGAGVVLSRDPKPRLRWTPDLHERFVEAVTKLGGPDKATPKSVLRLMGMKGLTLYHLKSH 75

Query: 345 LQKYRLGKQAQRETSLDQSKDSAGSSEDRSYMNYQSATSAIAPRV--NNEGEFQITENLR 518
           LQKYRLGKQ +++T L+ S+ +  +      +++ SA     P    NN GE  + + LR
Sbjct: 76  LQKYRLGKQNKKDTGLEASRGAFAAHG----ISFASAAPPTIPSAENNNAGETPLADALR 131

Query: 519 YQIDVQRKLQEQLEVQRKLQTRIEAQGKYLQAILEKAQKSLSADLNNSEHLEATRDQLTD 698
           YQI+VQRKL EQLEVQ+KLQ RIEAQGKYLQ ILEKAQ +LS D   + +LEATR QLTD
Sbjct: 132 YQIEVQRKLHEQLEVQKKLQMRIEAQGKYLQTILEKAQNNLSYDATGTANLEATRTQLTD 191

Query: 699 FNLALSGLMENMTQV---NEEERKEDTTEKNTCQYKKVHSSAFQLYHXXXXXXXXXXXXX 869
           FNLALSG M N++QV   N  E  +  +E N     +  +  FQLYH             
Sbjct: 192 FNLALSGFMNNVSQVCEQNNGELAKAISEDNL----RTTNLGFQLYHGIQDSDDVKCSQD 247

Query: 870 XXXXSFLFDLNING----NYEFNGANGSEFDTKIHTERR 974
                 L DLNI G    +   N   G E   KI   RR
Sbjct: 248 EGL--LLLDLNIKGGGYDHLSSNAMRGGESGLKISQHRR 284


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