BLASTX nr result

ID: Coptis24_contig00016286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016286
         (1567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529378.1| DNA-3-methyladenine glycosylase, putative [R...   412   e-112
ref|XP_002324538.1| predicted protein [Populus trichocarpa] gi|2...   407   e-111
ref|XP_002309346.1| predicted protein [Populus trichocarpa] gi|2...   402   e-109
ref|XP_003549544.1| PREDICTED: probable GMP synthase [glutamine-...   392   e-106
ref|XP_002276173.1| PREDICTED: probable GMP synthase [glutamine-...   392   e-106

>ref|XP_002529378.1| DNA-3-methyladenine glycosylase, putative [Ricinus communis]
            gi|223531126|gb|EEF32974.1| DNA-3-methyladenine
            glycosylase, putative [Ricinus communis]
          Length = 380

 Score =  412 bits (1060), Expect = e-112
 Identities = 226/377 (59%), Positives = 259/377 (68%), Gaps = 29/377 (7%)
 Frame = +3

Query: 153  IRSEPMSEPEPRSVLGPAGNKSRSSFA--KPTSN---KSDVDITTTNTEQNKKRILK--- 308
            +RS  +++ E R VLGP GN    S +  KP S    K +         Q KK +     
Sbjct: 7    VRSMNVADSETRPVLGPTGNNKAGSLSAKKPASKQLRKVETSPEAVKLGQEKKLVTVPTA 66

Query: 309  ----------KVPSVLRRQE-------SLNASCSSDVSTDSLQSRGSTGRLFTRSNSTST 437
                       VPSVLRR E       SLNASCSSD STDS  SR STGRL TRSNS  T
Sbjct: 67   SALSPKSHSVSVPSVLRRHEQLLHSNLSLNASCSSDASTDSFHSRASTGRL-TRSNSLGT 125

Query: 438  RRKQCXXXXXXXXXXXXXXXXXXXX----KKRCPWVTPNTEPCYAAFHDEEWGVPVHDDK 605
            RRKQ                         KK C WVTPN +PCY AFHDEEWG+PVHDDK
Sbjct: 126  RRKQYALKPRSVVSDGGLESPPPSDGSQAKKSCAWVTPNADPCYTAFHDEEWGIPVHDDK 185

Query: 606  KLFELLVFSGALAEQTWPTILMKRHIFREVFADFDPVAVSKFNEKKILAPGSTANSLLSD 785
            KLFELLV SGALAE TWP IL KRHIFREVFA+FDPV VSKFNEKKI+APGSTA+SLLS+
Sbjct: 186  KLFELLVLSGALAELTWPAILSKRHIFREVFANFDPVVVSKFNEKKIIAPGSTASSLLSE 245

Query: 786  VKLRAIIENARQIVKIVDEFGSFDKYIWSFVNYKPIVNKFRYARQVPAKTSKADVMSKDL 965
            +KLRAIIENARQI K+ DE GSFDKYIWSFVNYKPIV++FRY RQVP KT KADV+SKDL
Sbjct: 246  IKLRAIIENARQISKVTDELGSFDKYIWSFVNYKPIVSRFRYPRQVPVKTPKADVISKDL 305

Query: 966  LRRGFRSVSATIIYSFMQVTGLTNDHLITCFRFQECINPVGQNEEDGSKMKVEERRSKEM 1145
            +RRGFRSV  T++YSFMQV GLTNDHLI+CFRFQECIN     EE+G  +KVE++ +  +
Sbjct: 306  VRRGFRSVGPTVVYSFMQVAGLTNDHLISCFRFQECINAAEGKEENG--VKVEDKITDGV 363

Query: 1146 LDLGLARAMDDFSFSSE 1196
            ++  ++ AMD+ SFSSE
Sbjct: 364  VESQISIAMDELSFSSE 380


>ref|XP_002324538.1| predicted protein [Populus trichocarpa] gi|222865972|gb|EEF03103.1|
            predicted protein [Populus trichocarpa]
          Length = 380

 Score =  407 bits (1047), Expect = e-111
 Identities = 221/378 (58%), Positives = 260/378 (68%), Gaps = 30/378 (7%)
 Frame = +3

Query: 153  IRSEPMSEPEPRSVLGPAGNKSRS--SFAKPTSNKS-----------------DVDITTT 275
            +RS  +++ E RSVLGP GN      S  KP S +S                  + +   
Sbjct: 7    VRSMNVADSEARSVLGPTGNNKAGPLSARKPVSKQSRKVEKSPEEVKLGEEKKTLTVPAV 66

Query: 276  NTEQNKKRILKKVPSVLRRQE-------SLNASCSSDVSTDSLQSRGSTGRLFTRSNSTS 434
             T   K   L  + SVLRR E       SLNASCSSD STDS  SR STGRL TRSNS  
Sbjct: 67   GTLSPKSHSLN-ISSVLRRHELLLHSNLSLNASCSSDASTDSFHSRASTGRL-TRSNSAG 124

Query: 435  TRRKQCXXXXXXXXXXXXXXXXXXXX----KKRCPWVTPNTEPCYAAFHDEEWGVPVHDD 602
            TRRKQ                         KK C WVTPNT+PCYA FHDEEWGVP+HDD
Sbjct: 125  TRRKQYVLRPRSFVSEGGLESPPSPDDSQSKKSCAWVTPNTDPCYATFHDEEWGVPIHDD 184

Query: 603  KKLFELLVFSGALAEQTWPTILMKRHIFREVFADFDPVAVSKFNEKKILAPGSTANSLLS 782
            +KLFELLV SGALAE TWP IL KRHIFREVFADFDP+AVSKFNEKKILAPGSTA SLLS
Sbjct: 185  RKLFELLVLSGALAELTWPAILSKRHIFREVFADFDPIAVSKFNEKKILAPGSTATSLLS 244

Query: 783  DVKLRAIIENARQIVKIVDEFGSFDKYIWSFVNYKPIVNKFRYARQVPAKTSKADVMSKD 962
            ++KLRAI+ENARQI K++DEFGSFDKYIWSFVNYKPIV++FRY RQVP KT KAD +SKD
Sbjct: 245  ELKLRAIVENARQISKVIDEFGSFDKYIWSFVNYKPIVSRFRYPRQVPVKTPKADAISKD 304

Query: 963  LLRRGFRSVSATIIYSFMQVTGLTNDHLITCFRFQECINPVGQNEEDGSKMKVEERRSKE 1142
            L+RRGFRSV  T+IYSFMQV G+TNDHLI+CFRFQEC++      E+G  +K E+ ++ +
Sbjct: 305  LVRRGFRSVGPTVIYSFMQVAGITNDHLISCFRFQECLDAAEGKVENG--IKSEDIKTND 362

Query: 1143 MLDLGLARAMDDFSFSSE 1196
            +++  ++ A+D+ SFSSE
Sbjct: 363  VMESKISIAIDELSFSSE 380


>ref|XP_002309346.1| predicted protein [Populus trichocarpa] gi|222855322|gb|EEE92869.1|
            predicted protein [Populus trichocarpa]
          Length = 381

 Score =  402 bits (1032), Expect = e-109
 Identities = 220/378 (58%), Positives = 261/378 (69%), Gaps = 30/378 (7%)
 Frame = +3

Query: 153  IRSEPMSEPEPRSVLGPAGNKSR---SSFAKPTSNKSDVD--------------ITTTNT 281
            +RS  +++ E R VLGP GN      +S  KP S +   D              + T  T
Sbjct: 7    VRSMNVADSEARPVLGPTGNTKAGPLTSARKPASKQLRKDGKSPEEAKLGEEKKVLTVPT 66

Query: 282  EQN--KKRILKKVPSVLRRQE-------SLNASCSSDVSTDSLQSRGSTGRLFTRSNSTS 434
              N   K +     SVLRR E       SLNASCSSD STDS  SR STGRL  RSN+  
Sbjct: 67   VGNLSPKSLSGNFSSVLRRHEQLLHSNLSLNASCSSDASTDSFHSRASTGRLI-RSNNVG 125

Query: 435  TRRKQCXXXXXXXXXXXXXXXXXXXX----KKRCPWVTPNTEPCYAAFHDEEWGVPVHDD 602
            TRRKQ                         KK C WVTPNT+PCY AFHDEEWG+PVHDD
Sbjct: 126  TRRKQYVSKPRSVVSDGGLESLPSSDGSQSKKSCAWVTPNTDPCYTAFHDEEWGLPVHDD 185

Query: 603  KKLFELLVFSGALAEQTWPTILMKRHIFREVFADFDPVAVSKFNEKKILAPGSTANSLLS 782
            +KLFELLV SGALAE TWP IL KRH+FREVFADFDP+AVSKFNEKKI+APGSTA SLLS
Sbjct: 186  RKLFELLVLSGALAELTWPAILSKRHMFREVFADFDPIAVSKFNEKKIIAPGSTAASLLS 245

Query: 783  DVKLRAIIENARQIVKIVDEFGSFDKYIWSFVNYKPIVNKFRYARQVPAKTSKADVMSKD 962
            ++KLRAIIENARQI K++DEFGSFDKYIWSFVNYKPIV++FRY RQVPAKT KAD +SKD
Sbjct: 246  ELKLRAIIENARQISKVIDEFGSFDKYIWSFVNYKPIVSRFRYPRQVPAKTPKADAISKD 305

Query: 963  LLRRGFRSVSATIIYSFMQVTGLTNDHLITCFRFQECINPVGQNEEDGSKMKVEERRSKE 1142
            L+RRGFRSV  T+IYSFMQV G+TNDHLI+CFRFQECI+     EE+G  +K E+ ++ +
Sbjct: 306  LVRRGFRSVGPTVIYSFMQVAGVTNDHLISCFRFQECIDAAEGKEENG--IKSEDVKTDD 363

Query: 1143 MLDLGLARAMDDFSFSSE 1196
            +++  ++ ++D+ SFSSE
Sbjct: 364  IMESKISISIDELSFSSE 381


>ref|XP_003549544.1| PREDICTED: probable GMP synthase [glutamine-hydrolyzing]-like
            [Glycine max]
          Length = 373

 Score =  392 bits (1008), Expect = e-106
 Identities = 212/369 (57%), Positives = 254/369 (68%), Gaps = 21/369 (5%)
 Frame = +3

Query: 153  IRSEPMSEPEP-RSVLGPAGNKSRSSFAKPTSNKSDVDITTTNTEQNKKRILKKVPSV-- 323
            +RS  + + E  R V GPAGNK+ S  ++ T++K          E  +K+   ++ SV  
Sbjct: 6    LRSMNVGDSEAARPVFGPAGNKTGSLSSRKTASKPLRKAEKLYNEAKEKKKSYEMSSVVA 65

Query: 324  ---------LRRQE-------SLNASCSSDVSTDSLQSRGSTGRLFTRSNSTSTRRKQCX 455
                     LRR E       SLNASCSSD STDS  SR STGRL TRSNS    RK+  
Sbjct: 66   SPQSHSASVLRRHEQLLHCNLSLNASCSSDASTDSFHSRASTGRL-TRSNSLGCTRKRSV 124

Query: 456  XXXXXXXXXXXXXXXXXXX--KKRCPWVTPNTEPCYAAFHDEEWGVPVHDDKKLFELLVF 629
                                 KKRC W+TPNTEPCYA FHDEEWGVPVHDDKKLFELLV 
Sbjct: 125  SKPRSVASDGVLESPPHGSQSKKRCAWITPNTEPCYATFHDEEWGVPVHDDKKLFELLVL 184

Query: 630  SGALAEQTWPTILMKRHIFREVFADFDPVAVSKFNEKKILAPGSTANSLLSDVKLRAIIE 809
            S AL+E +WP IL KRHIFREVF DFDPVAVSKFNEKKI+APGSTA+SLLSD+KLRAIIE
Sbjct: 185  SSALSELSWPAILSKRHIFREVFVDFDPVAVSKFNEKKIMAPGSTASSLLSDLKLRAIIE 244

Query: 810  NARQIVKIVDEFGSFDKYIWSFVNYKPIVNKFRYARQVPAKTSKADVMSKDLLRRGFRSV 989
            NARQI K+++EFGSFDKYIWSFVN+KPI+++FRY RQVP KT KADV+SKDL+RRGFR V
Sbjct: 245  NARQISKVIEEFGSFDKYIWSFVNHKPIISRFRYPRQVPVKTPKADVISKDLVRRGFRGV 304

Query: 990  SATIIYSFMQVTGLTNDHLITCFRFQECINPVGQNEEDGSKMKVEERRSKEMLDLGLARA 1169
              T+IYSFMQV GLTNDHLI+CFRFQ+C+      EE+  K   +++    +++  L+ A
Sbjct: 305  GPTVIYSFMQVVGLTNDHLISCFRFQDCMAAAEGKEENAIKDDAQQKERDHVMESDLSIA 364

Query: 1170 MDDFSFSSE 1196
            +D+ S SSE
Sbjct: 365  IDNLSLSSE 373


>ref|XP_002276173.1| PREDICTED: probable GMP synthase [glutamine-hydrolyzing] [Vitis
            vinifera] gi|297743642|emb|CBI36525.3| unnamed protein
            product [Vitis vinifera]
          Length = 375

 Score =  392 bits (1007), Expect = e-106
 Identities = 212/371 (57%), Positives = 260/371 (70%), Gaps = 23/371 (6%)
 Frame = +3

Query: 153  IRSEPMSEPEPRSVLGPAGNKSRSSFA--KPTSN---------KSDVDI----TTTNTEQ 287
            +RS  +++ E R VLGPAGNK+  S +  KP +          K D +I    ++     
Sbjct: 7    VRSMNVADSEVRPVLGPAGNKTMRSLSGRKPATKPLRKAEKATKDDEEIKALPSSNGAAS 66

Query: 288  NKKRILKKVPSVLRRQE-------SLNASCSSDVSTDSLQSRGSTGRLFTRSNSTSTRRK 446
            +       VP VLRRQE       SLNASCSSD STDS  SR STGR+ TRS+ST+ RR 
Sbjct: 67   SPPSHSVSVPLVLRRQEQLLHSNLSLNASCSSDASTDSFHSRASTGRI-TRSSSTARRRS 125

Query: 447  QCXXXXXXXXXXXXXXXXXXXX-KKRCPWVTPNTEPCYAAFHDEEWGVPVHDDKKLFELL 623
                                   K+RC WVTPNT+  Y AFHDEEWGVPVHDDKKLFELL
Sbjct: 126  YASKPKVIVSDGVSESPPDGLKAKRRCAWVTPNTDLSYIAFHDEEWGVPVHDDKKLFELL 185

Query: 624  VFSGALAEQTWPTILMKRHIFREVFADFDPVAVSKFNEKKILAPGSTANSLLSDVKLRAI 803
            V SGALAE TWPTIL KRHIFREVFADFDP+AV+K NEKK++APGS A+SL+S++KLR I
Sbjct: 186  VLSGALAELTWPTILSKRHIFREVFADFDPIAVAKLNEKKLMAPGSIASSLISELKLRGI 245

Query: 804  IENARQIVKIVDEFGSFDKYIWSFVNYKPIVNKFRYARQVPAKTSKADVMSKDLLRRGFR 983
            IENARQ+ K++DEFGSFD+YIWSFVN+KPIV++FRY R VP KT KADV+SKDL+RRGFR
Sbjct: 246  IENARQMSKVIDEFGSFDEYIWSFVNHKPIVSRFRYPRHVPVKTPKADVISKDLVRRGFR 305

Query: 984  SVSATIIYSFMQVTGLTNDHLITCFRFQECINPVGQNEEDGSKMKVEERRSKEMLDLGLA 1163
            SV  T+IYSFMQV G+TNDHLI+CFRFQ+C+      EE+ +    EE++S  +++  L+
Sbjct: 306  SVGPTVIYSFMQVAGITNDHLISCFRFQDCVTAAEVKEEEITTGAAEEKKS-NVIESELS 364

Query: 1164 RAMDDFSFSSE 1196
            RA+D+ SFSSE
Sbjct: 365  RAIDELSFSSE 375


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