BLASTX nr result
ID: Coptis24_contig00016256
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00016256 (390 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273234.1| PREDICTED: uncharacterized protein LOC100262... 103 1e-20 emb|CAN69049.1| hypothetical protein VITISV_001510 [Vitis vinifera] 103 2e-20 ref|XP_002523846.1| conserved hypothetical protein [Ricinus comm... 94 1e-17 gb|ACR37602.1| unknown [Zea mays] 85 5e-15 ref|XP_002312836.1| predicted protein [Populus trichocarpa] gi|2... 85 5e-15 >ref|XP_002273234.1| PREDICTED: uncharacterized protein LOC100262096 [Vitis vinifera] gi|296084875|emb|CBI28284.3| unnamed protein product [Vitis vinifera] Length = 315 Score = 103 bits (257), Expect = 1e-20 Identities = 48/61 (78%), Positives = 55/61 (90%) Frame = -2 Query: 389 RLMIPAIIYGLWGLSNHFSYEFLDFQVVPAIFGMLAYKAAALVQVYRDNEDLEFVFPDSE 210 RL+IPA IYGLW LS HF+ +F DFQ+VPA+FGM AYKAAALVQVYRDNEDL+FVFPD+E Sbjct: 251 RLVIPAAIYGLWILSQHFAGDFFDFQLVPAMFGMFAYKAAALVQVYRDNEDLQFVFPDNE 310 Query: 209 E 207 E Sbjct: 311 E 311 >emb|CAN69049.1| hypothetical protein VITISV_001510 [Vitis vinifera] Length = 305 Score = 103 bits (256), Expect = 2e-20 Identities = 47/61 (77%), Positives = 55/61 (90%) Frame = -2 Query: 389 RLMIPAIIYGLWGLSNHFSYEFLDFQVVPAIFGMLAYKAAALVQVYRDNEDLEFVFPDSE 210 RL+IPA +YGLW LS HF+ +F DFQ+VPA+FGM AYKAAALVQVYRDNEDL+FVFPD+E Sbjct: 241 RLVIPAAJYGLWILSQHFAGDFFDFQLVPAMFGMFAYKAAALVQVYRDNEDLQFVFPDNE 300 Query: 209 E 207 E Sbjct: 301 E 301 >ref|XP_002523846.1| conserved hypothetical protein [Ricinus communis] gi|223536934|gb|EEF38572.1| conserved hypothetical protein [Ricinus communis] Length = 314 Score = 94.0 bits (232), Expect = 1e-17 Identities = 44/63 (69%), Positives = 53/63 (84%), Gaps = 1/63 (1%) Frame = -2 Query: 389 RLMIPAIIYGLWGLSNH-FSYEFLDFQVVPAIFGMLAYKAAALVQVYRDNEDLEFVFPDS 213 RLMIPA +YGLW LS+H FS + DFQ+VPA+FGM YKAAALVQVYRDNEDL+F+FP+ Sbjct: 249 RLMIPAAVYGLWVLSHHYFSNDIFDFQIVPAMFGMFVYKAAALVQVYRDNEDLQFLFPED 308 Query: 212 EET 204 E+ Sbjct: 309 GES 311 >gb|ACR37602.1| unknown [Zea mays] Length = 101 Score = 85.1 bits (209), Expect = 5e-15 Identities = 39/60 (65%), Positives = 46/60 (76%) Frame = -2 Query: 389 RLMIPAIIYGLWGLSNHFSYEFLDFQVVPAIFGMLAYKAAALVQVYRDNEDLEFVFPDSE 210 RL+IPA+IYGL LS+HF F F+V+P + G LAYKAAALVQVYRDNEDL + PD E Sbjct: 35 RLIIPAVIYGLSALSHHFQNSFFSFEVLPGMMGFLAYKAAALVQVYRDNEDLRLILPDEE 94 >ref|XP_002312836.1| predicted protein [Populus trichocarpa] gi|222849244|gb|EEE86791.1| predicted protein [Populus trichocarpa] Length = 311 Score = 85.1 bits (209), Expect = 5e-15 Identities = 40/62 (64%), Positives = 51/62 (82%), Gaps = 1/62 (1%) Frame = -2 Query: 389 RLMIPAIIYGLWGLSN-HFSYEFLDFQVVPAIFGMLAYKAAALVQVYRDNEDLEFVFPDS 213 R++IPA IYGLW LS+ +F +F + Q+VPA+FGM YKA+ALVQVYRDN+DL+ VFPDS Sbjct: 246 RIVIPAAIYGLWVLSHQYFPNDFFEIQIVPAMFGMFVYKASALVQVYRDNDDLKLVFPDS 305 Query: 212 EE 207 E Sbjct: 306 GE 307