BLASTX nr result

ID: Coptis24_contig00016256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016256
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273234.1| PREDICTED: uncharacterized protein LOC100262...   103   1e-20
emb|CAN69049.1| hypothetical protein VITISV_001510 [Vitis vinifera]   103   2e-20
ref|XP_002523846.1| conserved hypothetical protein [Ricinus comm...    94   1e-17
gb|ACR37602.1| unknown [Zea mays]                                      85   5e-15
ref|XP_002312836.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15

>ref|XP_002273234.1| PREDICTED: uncharacterized protein LOC100262096 [Vitis vinifera]
           gi|296084875|emb|CBI28284.3| unnamed protein product
           [Vitis vinifera]
          Length = 315

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/61 (78%), Positives = 55/61 (90%)
 Frame = -2

Query: 389 RLMIPAIIYGLWGLSNHFSYEFLDFQVVPAIFGMLAYKAAALVQVYRDNEDLEFVFPDSE 210
           RL+IPA IYGLW LS HF+ +F DFQ+VPA+FGM AYKAAALVQVYRDNEDL+FVFPD+E
Sbjct: 251 RLVIPAAIYGLWILSQHFAGDFFDFQLVPAMFGMFAYKAAALVQVYRDNEDLQFVFPDNE 310

Query: 209 E 207
           E
Sbjct: 311 E 311


>emb|CAN69049.1| hypothetical protein VITISV_001510 [Vitis vinifera]
          Length = 305

 Score =  103 bits (256), Expect = 2e-20
 Identities = 47/61 (77%), Positives = 55/61 (90%)
 Frame = -2

Query: 389 RLMIPAIIYGLWGLSNHFSYEFLDFQVVPAIFGMLAYKAAALVQVYRDNEDLEFVFPDSE 210
           RL+IPA +YGLW LS HF+ +F DFQ+VPA+FGM AYKAAALVQVYRDNEDL+FVFPD+E
Sbjct: 241 RLVIPAAJYGLWILSQHFAGDFFDFQLVPAMFGMFAYKAAALVQVYRDNEDLQFVFPDNE 300

Query: 209 E 207
           E
Sbjct: 301 E 301


>ref|XP_002523846.1| conserved hypothetical protein [Ricinus communis]
           gi|223536934|gb|EEF38572.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 314

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 44/63 (69%), Positives = 53/63 (84%), Gaps = 1/63 (1%)
 Frame = -2

Query: 389 RLMIPAIIYGLWGLSNH-FSYEFLDFQVVPAIFGMLAYKAAALVQVYRDNEDLEFVFPDS 213
           RLMIPA +YGLW LS+H FS +  DFQ+VPA+FGM  YKAAALVQVYRDNEDL+F+FP+ 
Sbjct: 249 RLMIPAAVYGLWVLSHHYFSNDIFDFQIVPAMFGMFVYKAAALVQVYRDNEDLQFLFPED 308

Query: 212 EET 204
            E+
Sbjct: 309 GES 311


>gb|ACR37602.1| unknown [Zea mays]
          Length = 101

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 39/60 (65%), Positives = 46/60 (76%)
 Frame = -2

Query: 389 RLMIPAIIYGLWGLSNHFSYEFLDFQVVPAIFGMLAYKAAALVQVYRDNEDLEFVFPDSE 210
           RL+IPA+IYGL  LS+HF   F  F+V+P + G LAYKAAALVQVYRDNEDL  + PD E
Sbjct: 35  RLIIPAVIYGLSALSHHFQNSFFSFEVLPGMMGFLAYKAAALVQVYRDNEDLRLILPDEE 94


>ref|XP_002312836.1| predicted protein [Populus trichocarpa] gi|222849244|gb|EEE86791.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 40/62 (64%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
 Frame = -2

Query: 389 RLMIPAIIYGLWGLSN-HFSYEFLDFQVVPAIFGMLAYKAAALVQVYRDNEDLEFVFPDS 213
           R++IPA IYGLW LS+ +F  +F + Q+VPA+FGM  YKA+ALVQVYRDN+DL+ VFPDS
Sbjct: 246 RIVIPAAIYGLWVLSHQYFPNDFFEIQIVPAMFGMFVYKASALVQVYRDNDDLKLVFPDS 305

Query: 212 EE 207
            E
Sbjct: 306 GE 307


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