BLASTX nr result

ID: Coptis24_contig00016175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016175
         (1241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525441.1| short-chain type dehydrogenase, putative [Ri...   258   2e-66
ref|XP_002319165.1| predicted protein [Populus trichocarpa] gi|2...   244   3e-62
ref|XP_002282164.1| PREDICTED: short-chain type dehydrogenase/re...   240   6e-61
ref|XP_002319166.1| predicted protein [Populus trichocarpa] gi|2...   234   4e-59
ref|XP_002863166.1| short-chain dehydrogenase/reductase family p...   233   1e-58

>ref|XP_002525441.1| short-chain type dehydrogenase, putative [Ricinus communis]
            gi|223535254|gb|EEF36931.1| short-chain type
            dehydrogenase, putative [Ricinus communis]
          Length = 268

 Score =  258 bits (659), Expect = 2e-66
 Identities = 130/203 (64%), Positives = 152/203 (74%)
 Frame = +3

Query: 525  NPDQVKSLFDQAEKAFGTQTYILVNCAGVLDSKYPTLANTTVEDWDTTFSVNTRGAFLCC 704
            +PDQVK LFD+ E+ FG++ +ILVNCAGV+D KYP+LANTTVEDWD TF+VN +GAFLCC
Sbjct: 83   DPDQVKQLFDRTEQEFGSKIHILVNCAGVMDPKYPSLANTTVEDWDMTFNVNAKGAFLCC 142

Query: 705  XXXXXXXXXXXXXXIMTITSSLVGSLYPGYSAYAASKAAVETMIKILAKELKGTGITANX 884
                          I+ I++S+VGS +PGY+AYAASKAAVETM KILAKELKGTGITAN 
Sbjct: 143  REAANRLASGGGGRIIMISTSVVGSNFPGYAAYAASKAAVETMTKILAKELKGTGITAN- 201

Query: 885  XXXXXXXXXXXXXXXXXXXXPGPVATELFYAGKTEEMIKRVADGCPLGRIGETNDIAPLV 1064
                                PGPVATELF+AGKTEE IKR+AD CPLGR+GE  DI+ +V
Sbjct: 202  -----------------CVAPGPVATELFFAGKTEETIKRIADSCPLGRLGEPKDISEIV 244

Query: 1065 GFLASDAGEWINGQIIRVNGGSV 1133
            GFLASDAGEWINGQ+IRVNGG V
Sbjct: 245  GFLASDAGEWINGQVIRVNGGFV 267



 Score = 81.3 bits (199), Expect = 5e-13
 Identities = 39/51 (76%), Positives = 47/51 (92%)
 Frame = +2

Query: 245 LPLNGRVAIVTGASRGIGRAIALHLASIGAKLVINYASSPTEADRVASEIN 397
           LPLN RVAIVTGASRGIGRAI++HL S+GAK+V+NYASS T+AD +ASE+N
Sbjct: 14  LPLNSRVAIVTGASRGIGRAISIHLHSLGAKVVLNYASSSTQADHLASELN 64


>ref|XP_002319165.1| predicted protein [Populus trichocarpa] gi|222857541|gb|EEE95088.1|
            predicted protein [Populus trichocarpa]
          Length = 268

 Score =  244 bits (623), Expect = 3e-62
 Identities = 123/203 (60%), Positives = 147/203 (72%)
 Frame = +3

Query: 525  NPDQVKSLFDQAEKAFGTQTYILVNCAGVLDSKYPTLANTTVEDWDTTFSVNTRGAFLCC 704
            +PDQVK LF + E+ FG++ +IL +CAGVLD KYP LANTTVEDWD TF+VNT+GAFLCC
Sbjct: 83   DPDQVKQLFSRTEEEFGSKIHILAHCAGVLDPKYPILANTTVEDWDMTFNVNTKGAFLCC 142

Query: 705  XXXXXXXXXXXXXXIMTITSSLVGSLYPGYSAYAASKAAVETMIKILAKELKGTGITANX 884
                          I+ I++SLVG+  PGY+AY ASKAAVETM +I+AKELKGTGITAN 
Sbjct: 143  REATNRLAYGGGGRIIMISTSLVGAPTPGYAAYTASKAAVETMTRIVAKELKGTGITAN- 201

Query: 885  XXXXXXXXXXXXXXXXXXXXPGPVATELFYAGKTEEMIKRVADGCPLGRIGETNDIAPLV 1064
                                PGPVATELF+AGKTEE +KR+AD CPL R+GE  DI+ +V
Sbjct: 202  -----------------CVAPGPVATELFFAGKTEETLKRIADACPLNRLGEPEDISKVV 244

Query: 1065 GFLASDAGEWINGQIIRVNGGSV 1133
            GF+ASDAGEWINGQ+IRVNGG V
Sbjct: 245  GFIASDAGEWINGQVIRVNGGFV 267



 Score = 74.7 bits (182), Expect = 5e-11
 Identities = 36/51 (70%), Positives = 46/51 (90%)
 Frame = +2

Query: 245 LPLNGRVAIVTGASRGIGRAIALHLASIGAKLVINYASSPTEADRVASEIN 397
           LPL+GRVAIVTGAS GIGRAI++HL S+GA++VINYAS+  +AD +ASE+N
Sbjct: 14  LPLDGRVAIVTGASGGIGRAISIHLHSLGARVVINYASNSNQADLLASELN 64


>ref|XP_002282164.1| PREDICTED: short-chain type dehydrogenase/reductase-like [Vitis
            vinifera]
          Length = 265

 Score =  240 bits (612), Expect = 6e-61
 Identities = 121/201 (60%), Positives = 146/201 (72%)
 Frame = +3

Query: 525  NPDQVKSLFDQAEKAFGTQTYILVNCAGVLDSKYPTLANTTVEDWDTTFSVNTRGAFLCC 704
            +PDQVK LFD+A++ FG+  +ILVNCAGVLD KYP+LANTTVEDWD TFS+NTRG+FL C
Sbjct: 81   DPDQVKMLFDRAQQEFGS-IHILVNCAGVLDPKYPSLANTTVEDWDNTFSINTRGSFLVC 139

Query: 705  XXXXXXXXXXXXXXIMTITSSLVGSLYPGYSAYAASKAAVETMIKILAKELKGTGITANX 884
                          I+ IT+S V +L PGY+AYAASKAAVETM KILAKELKGT +TAN 
Sbjct: 140  REAANRLIRGGGGRIILITTSAVAALTPGYAAYAASKAAVETMTKILAKELKGTSVTAN- 198

Query: 885  XXXXXXXXXXXXXXXXXXXXPGPVATELFYAGKTEEMIKRVADGCPLGRIGETNDIAPLV 1064
                                PGP+ATE+F+ GK+EE+IKR+ D CP+GR+GE  D+  LV
Sbjct: 199  -----------------CVAPGPIATEMFFEGKSEELIKRLVDACPMGRLGEPKDVTQLV 241

Query: 1065 GFLASDAGEWINGQIIRVNGG 1127
            GFLA+DAGEWINGQIIR+NGG
Sbjct: 242  GFLATDAGEWINGQIIRINGG 262



 Score = 76.3 bits (186), Expect = 2e-11
 Identities = 37/51 (72%), Positives = 45/51 (88%)
 Frame = +2

Query: 245 LPLNGRVAIVTGASRGIGRAIALHLASIGAKLVINYASSPTEADRVASEIN 397
           LPL GRVAIVTGASRGIGRAIA+HL S+GA+LV+NYAS+   AD +AS++N
Sbjct: 11  LPLEGRVAIVTGASRGIGRAIAIHLRSLGARLVLNYASNSALADALASQLN 61


>ref|XP_002319166.1| predicted protein [Populus trichocarpa] gi|222857542|gb|EEE95089.1|
            predicted protein [Populus trichocarpa]
          Length = 263

 Score =  234 bits (596), Expect = 4e-59
 Identities = 119/203 (58%), Positives = 145/203 (71%)
 Frame = +3

Query: 525  NPDQVKSLFDQAEKAFGTQTYILVNCAGVLDSKYPTLANTTVEDWDTTFSVNTRGAFLCC 704
            +P QVK LFD+AE+ FG+Q +ILVNCAGVLD KYP++ NT++ED+D  FSVNTRGAFLCC
Sbjct: 79   DPAQVKFLFDEAERVFGSQLHILVNCAGVLDPKYPSIPNTSLEDFDHIFSVNTRGAFLCC 138

Query: 705  XXXXXXXXXXXXXXIMTITSSLVGSLYPGYSAYAASKAAVETMIKILAKELKGTGITANX 884
                          I+ ++SS+VG L PG+ AYAASKAAVET+I+ILAKELKGTGITAN 
Sbjct: 139  KEAASRLKHGGGGRIIVLSSSMVGGLMPGFGAYAASKAAVETIIRILAKELKGTGITAN- 197

Query: 885  XXXXXXXXXXXXXXXXXXXXPGPVATELFYAGKTEEMIKRVADGCPLGRIGETNDIAPLV 1064
                                PGPVATE+++AGKTEE IK   +  PLGR+GET DIA +V
Sbjct: 198  -----------------CVAPGPVATEMYFAGKTEEQIKNNIESSPLGRLGETKDIAEVV 240

Query: 1065 GFLASDAGEWINGQIIRVNGGSV 1133
            GF+A+DA EWINGQ+IR NGG V
Sbjct: 241  GFMATDASEWINGQVIRANGGYV 263



 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 37/51 (72%), Positives = 45/51 (88%)
 Frame = +2

Query: 245 LPLNGRVAIVTGASRGIGRAIALHLASIGAKLVINYASSPTEADRVASEIN 397
           LPL  RVAIVTG+SRGIG+AIA+HLAS+GAKLVINY S+  +AD VA++IN
Sbjct: 10  LPLQDRVAIVTGSSRGIGKAIAIHLASLGAKLVINYTSNKEQADLVANDIN 60


>ref|XP_002863166.1| short-chain dehydrogenase/reductase family protein [Arabidopsis
            lyrata subsp. lyrata] gi|297309000|gb|EFH39425.1|
            short-chain dehydrogenase/reductase family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 263

 Score =  233 bits (593), Expect = 1e-58
 Identities = 112/203 (55%), Positives = 145/203 (71%)
 Frame = +3

Query: 525  NPDQVKSLFDQAEKAFGTQTYILVNCAGVLDSKYPTLANTTVEDWDTTFSVNTRGAFLCC 704
            +PD++ +LFDQ E+ FG++ +I+VNCAGVLD KYP+L+ TT+ED+D TF++NTRG+FLCC
Sbjct: 78   DPDEINNLFDQTEQEFGSKVHIVVNCAGVLDPKYPSLSETTLEDFDKTFTINTRGSFLCC 137

Query: 705  XXXXXXXXXXXXXXIMTITSSLVGSLYPGYSAYAASKAAVETMIKILAKELKGTGITANX 884
                          I+ +++S+VG L PGY  YAASKAAVETM+K+LAKELKG+ ITAN 
Sbjct: 138  KEAAKRVMRGGGGRIIMMSTSMVGGLAPGYGVYAASKAAVETMVKVLAKELKGSRITAN- 196

Query: 885  XXXXXXXXXXXXXXXXXXXXPGPVATELFYAGKTEEMIKRVADGCPLGRIGETNDIAPLV 1064
                                PGPVATE+FYAGK++EM+K +A  CP+GRIGE+ DI  +V
Sbjct: 197  -----------------CVAPGPVATEMFYAGKSDEMVKMLAGACPMGRIGESKDITEIV 239

Query: 1065 GFLASDAGEWINGQIIRVNGGSV 1133
            GFLA D GEWINGQ+IR NGG V
Sbjct: 240  GFLAGDGGEWINGQVIRANGGFV 262



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 31/51 (60%), Positives = 42/51 (82%)
 Frame = +2

Query: 245 LPLNGRVAIVTGASRGIGRAIALHLASIGAKLVINYASSPTEADRVASEIN 397
           LPL GRVAIVTGA+RG+GR IA+HL S+GA++ INY SS ++A+ +  E+N
Sbjct: 11  LPLAGRVAIVTGATRGMGREIAIHLHSLGARVTINYVSSSSKAELLVQELN 61


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