BLASTX nr result

ID: Coptis24_contig00016154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016154
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19060.3| unnamed protein product [Vitis vinifera]              147   2e-33
ref|XP_002513771.1| conserved hypothetical protein [Ricinus comm...   145   8e-33
ref|XP_002284405.1| PREDICTED: uncharacterized protein LOC100254...   141   1e-31
ref|XP_002306618.1| predicted protein [Populus trichocarpa] gi|2...   141   1e-31
ref|XP_004140387.1| PREDICTED: UPF0695 membrane protein YPL279C-...   123   4e-26

>emb|CBI19060.3| unnamed protein product [Vitis vinifera]
          Length = 528

 Score =  147 bits (371), Expect = 2e-33
 Identities = 92/196 (46%), Positives = 123/196 (62%), Gaps = 2/196 (1%)
 Frame = -1

Query: 584 SFDRTSSVGASFWRRPSQTSSNQVAPELSDDDIESEVISQAGDTGE--VNSKLYSGSGTP 411
           SF R+SS G+S  RR S      V P++ DDDIESE +SQAGD G+  ++S   S S + 
Sbjct: 70  SFGRSSSAGSSL-RRRSCGLPGPVPPQM-DDDIESETVSQAGDIGDRALHSNRISESSSF 127

Query: 410 RSSMDNFMSVEDGIVPITEDPYVQTFGAWSRGTNAFSTVSVVSPLPSEIVSSFSTEPALH 231
           R S DN +     +VPI E+  ++    W R   A +TVS  SPLP EI+S  S++  ++
Sbjct: 128 RLSFDNLLD-NGVVVPIPENSLLKPHEIWFRDATA-NTVSPASPLPLEIISPLSSDAMVY 185

Query: 230 PRNKNLSTSAEMSIPHVKESKKELPCLLEYISALTHLAVFGILGVFTRYLLQKLFGPEVA 51
             +K+            +++KKELP L+EYIS L HLAV GILG  TRYLLQKLFGP VA
Sbjct: 186 SADKD------------EDNKKELPWLVEYISCLIHLAVLGILGALTRYLLQKLFGPGVA 233

Query: 50  GITSDQTFVYIDLPSN 3
            +TS+Q+ +Y+DLPSN
Sbjct: 234 SLTSNQSILYLDLPSN 249


>ref|XP_002513771.1| conserved hypothetical protein [Ricinus communis]
           gi|223546857|gb|EEF48354.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 471

 Score =  145 bits (366), Expect = 8e-33
 Identities = 91/197 (46%), Positives = 127/197 (64%), Gaps = 3/197 (1%)
 Frame = -1

Query: 584 SFDRTSSVGASFWRRPSQTSSNQVAPELSDDDIESEVISQAGDTGE--VNSKLYSGSGTP 411
           SF RTSS+G+S  RR    S ++  P    DD ESE +S+AGD G+  +NS  +S SG+ 
Sbjct: 15  SFGRTSSMGSSLRRR--SLSLSRTVPFQIGDDAESENVSEAGDIGDRALNSSRHSDSGSI 72

Query: 410 RSSMDNFMSVEDGIV-PITEDPYVQTFGAWSRGTNAFSTVSVVSPLPSEIVSSFSTEPAL 234
           R S+D+  ++E+G+V PI E+ ++Q+ G  S  + AF+  S VSPLP EI+S  ST+  +
Sbjct: 73  RVSIDS--ALENGVVFPIQENNFLQSHGFRSHSSAAFNA-SPVSPLPEEIISPLSTDAIV 129

Query: 233 HPRNKNLSTSAEMSIPHVKESKKELPCLLEYISALTHLAVFGILGVFTRYLLQKLFGPEV 54
             ++              KE+   LP ++EYIS L +L+VFGILGV TRY+LQKLFGP V
Sbjct: 130 CAKDNQQD----------KEAAMVLPPIMEYISCLVYLSVFGILGVLTRYVLQKLFGPSV 179

Query: 53  AGITSDQTFVYIDLPSN 3
           AG+TSD   +Y+DLPSN
Sbjct: 180 AGVTSDHYPLYLDLPSN 196


>ref|XP_002284405.1| PREDICTED: uncharacterized protein LOC100254107 [Vitis vinifera]
          Length = 510

 Score =  141 bits (355), Expect = 1e-31
 Identities = 91/196 (46%), Positives = 117/196 (59%), Gaps = 2/196 (1%)
 Frame = -1

Query: 584 SFDRTSSVGASFWRRPSQTSSNQVAPELSDDDIESEVISQAGDTGE--VNSKLYSGSGTP 411
           SF R+SS G+S  RR S      V P++ DDDIESE +SQAGD G+  ++S   S S + 
Sbjct: 60  SFGRSSSAGSSL-RRRSCGLPGPVPPQM-DDDIESETVSQAGDIGDRALHSNRISESSSF 117

Query: 410 RSSMDNFMSVEDGIVPITEDPYVQTFGAWSRGTNAFSTVSVVSPLPSEIVSSFSTEPALH 231
           R S DN +     +VPI E+  ++    W R   A +TVS  SPLP EI+S  S++    
Sbjct: 118 RLSFDNLLD-NGVVVPIPENSLLKPHEIWFRDATA-NTVSPASPLPLEIISPLSSD---- 171

Query: 230 PRNKNLSTSAEMSIPHVKESKKELPCLLEYISALTHLAVFGILGVFTRYLLQKLFGPEVA 51
                             ++KKELP L+EYIS L HLAV GILG  TRYLLQKLFGP VA
Sbjct: 172 ----------------AMDNKKELPWLVEYISCLIHLAVLGILGALTRYLLQKLFGPGVA 215

Query: 50  GITSDQTFVYIDLPSN 3
            +TS+Q+ +Y+DLPSN
Sbjct: 216 SLTSNQSILYLDLPSN 231


>ref|XP_002306618.1| predicted protein [Populus trichocarpa] gi|222856067|gb|EEE93614.1|
           predicted protein [Populus trichocarpa]
          Length = 470

 Score =  141 bits (355), Expect = 1e-31
 Identities = 93/200 (46%), Positives = 125/200 (62%), Gaps = 6/200 (3%)
 Frame = -1

Query: 584 SFDRTSSVGASFWRRP---SQTSSNQVAPELSDDDIESEVISQAGDTGE--VNSKLYSGS 420
           SF +TS+VG+S  RR    S++ S QV     DDDIESE +S+AGD G+  ++SK ++ S
Sbjct: 15  SFRQTSNVGSSVRRRSLSLSRSRSFQV-----DDDIESENVSEAGDIGDRALHSKRHNES 69

Query: 419 GTPRSSMDNFMSVEDGIV-PITEDPYVQTFGAWSRGTNAFSTVSVVSPLPSEIVSSFSTE 243
           G+   S+D+   +E+G V P++ D ++++ G W+  + A +T S V P   EIVS  ST+
Sbjct: 70  GSISLSIDS--ELENGTVFPLSNDNFLRSHGLWAHDSTALNTRSPVLPSAEEIVSPISTD 127

Query: 242 PALHPRNKNLSTSAEMSIPHVKESKKELPCLLEYISALTHLAVFGILGVFTRYLLQKLFG 63
             +  R K             KE    LP  LEYIS L +LAVFGILGV TRYLLQKLFG
Sbjct: 128 AVVCSREKQED----------KEKAFVLPPALEYISCLLYLAVFGILGVLTRYLLQKLFG 177

Query: 62  PEVAGITSDQTFVYIDLPSN 3
           P VAG+TSD   +Y+DLPSN
Sbjct: 178 PGVAGVTSDNYPLYLDLPSN 197


>ref|XP_004140387.1| PREDICTED: UPF0695 membrane protein YPL279C-like [Cucumis sativus]
           gi|449502484|ref|XP_004161653.1| PREDICTED: UPF0695
           membrane protein YPL279C-like [Cucumis sativus]
          Length = 596

 Score =  123 bits (308), Expect = 4e-26
 Identities = 81/200 (40%), Positives = 115/200 (57%), Gaps = 4/200 (2%)
 Frame = -1

Query: 590 GVSFDRTSSVGASFWRRPSQTSSNQVAPELSDDDIESEVISQAGDTGEVNSKLYSGSGTP 411
           G+  +R  S+G+SF R    +S +   P  +  D+E+E +S+AGD G+        S + 
Sbjct: 140 GIPLNRARSLGSSFRRNSFNSSGSGYQPPQTGHDVETESVSEAGDIGDRALCSNRISDSE 199

Query: 410 RSSMDNFMSVEDG-IVPITEDPYVQTFGAWSRGTNAF--STVSVVSPLPSEIVSSFST-E 243
           R S+    ++E+G I PI E+ ++Q++G   R +     +TVS V PL  + VSS ST  
Sbjct: 200 RFSLSLDHALENGAIAPIPENIFLQSYGFRGRESATIDDTTVSSVPPLEEQNVSSPSTCR 259

Query: 242 PALHPRNKNLSTSAEMSIPHVKESKKELPCLLEYISALTHLAVFGILGVFTRYLLQKLFG 63
           P +H  +              +ES  +L  LLEY++ L HLAVFGILGV TRY LQKLFG
Sbjct: 260 PIVHSGDTK------------QESNMKLSKLLEYVTCLVHLAVFGILGVLTRYGLQKLFG 307

Query: 62  PEVAGITSDQTFVYIDLPSN 3
           PE A +TS+ T +Y DLPSN
Sbjct: 308 PENANVTSNDTILYPDLPSN 327


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