BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016134
         (817 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156778.1| PREDICTED: pentatricopeptide repeat-containi...   186   7e-45
ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containi...   186   7e-45
gb|AAS80150.1| ACT11D09.4 [Cucumis melo]                              184   2e-44
ref|XP_003548343.1| PREDICTED: pentatricopeptide repeat-containi...   179   9e-43
ref|XP_003539383.1| PREDICTED: pentatricopeptide repeat-containi...   173   4e-41

>ref|XP_004156778.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like [Cucumis sativus]
          Length = 559

 Score =  186 bits (471), Expect = 7e-45
 Identities = 121/272 (44%), Positives = 155/272 (56%), Gaps = 3/272 (1%)
 Frame = -3

Query: 815 TKGLVSANRLSEAVDLLHQMRARDSNINNFALVYANLISGYLESDELERANELFHEFIDN 636
           TKGL+ A R+ EAVDLL +M  +    ++  LV+ NLISG+L    LE+ANELF E    
Sbjct: 30  TKGLIDAGRIEEAVDLLREMLNKGHGADS--LVFNNLISGFLNLGNLEKANELFDEL--- 84

Query: 635 PGDRHCVKDGYVYASFMEYYLDHNMEKEAMELYKSLLNRQLVMLSAVYNELLNVLLKHGK 456
             +R  V DG V A+FM+++ +   EKEAME YKSLL+RQ  M+ A  N LL VLLKH K
Sbjct: 85  -KERCLVYDGVVNATFMDWFFNQGKEKEAMESYKSLLDRQFKMVPATCNVLLEVLLKHEK 143

Query: 455 FVEANTLFDSIFKQDTP--FHTSNSHTFNIMVNHWFGVGKVSEALSVFNIYRDEPAPMYG 282
             EA TLFD +    TP  F   NS TFNIMVN  F  GK +EA+  F     +P     
Sbjct: 144 KTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKHGKFAEAVETFRKVGTQP----- 198

Query: 281 KLGPLYRDVVVHNNIIGKLFDTGMVAEAGELVDEVCSKLYFADVTTYTILFDAYFKQERI 102
           K  P   DV  +NNII +  + GM+A+A     E+CSK    DV T+  L ++Y K E+I
Sbjct: 199 KSRPFAMDVAGYNNIIARFCEQGMMADAETFFAELCSKSLSPDVPTHRTLIESYLKIEQI 258

Query: 101 RDVLKWFRHLV-LKTTFEPSFALVNSVFSRLI 9
            D L+ F  +V +      SF   N VF  LI
Sbjct: 259 DDALRVFNRMVDVGLRVVASFG--NMVFGELI 288


>ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like [Cucumis sativus]
          Length = 871

 Score =  186 bits (471), Expect = 7e-45
 Identities = 121/272 (44%), Positives = 155/272 (56%), Gaps = 3/272 (1%)
 Frame = -3

Query: 815 TKGLVSANRLSEAVDLLHQMRARDSNINNFALVYANLISGYLESDELERANELFHEFIDN 636
           TKGL+ A R+ EAVDLL +M  +    ++  LV+ NLISG+L    LE+ANELF E    
Sbjct: 196 TKGLIDAGRIEEAVDLLREMLNKGHGADS--LVFNNLISGFLNLGNLEKANELFDEL--- 250

Query: 635 PGDRHCVKDGYVYASFMEYYLDHNMEKEAMELYKSLLNRQLVMLSAVYNELLNVLLKHGK 456
             +R  V DG V A+FM+++ +   EKEAME YKSLL+RQ  M+ A  N LL VLLKH K
Sbjct: 251 -KERCLVYDGVVNATFMDWFFNQGKEKEAMESYKSLLDRQFKMVPATCNVLLEVLLKHEK 309

Query: 455 FVEANTLFDSIFKQDTP--FHTSNSHTFNIMVNHWFGVGKVSEALSVFNIYRDEPAPMYG 282
             EA TLFD +    TP  F   NS TFNIMVN  F  GK +EA+  F     +P     
Sbjct: 310 KTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKHGKFAEAVETFRKVGTQP----- 364

Query: 281 KLGPLYRDVVVHNNIIGKLFDTGMVAEAGELVDEVCSKLYFADVTTYTILFDAYFKQERI 102
           K  P   DV  +NNII +  + GM+A+A     E+CSK    DV T+  L ++Y K E+I
Sbjct: 365 KSRPFAMDVAGYNNIIARFCEQGMMADAETFFAELCSKSLSPDVPTHRTLIESYLKIEQI 424

Query: 101 RDVLKWFRHLV-LKTTFEPSFALVNSVFSRLI 9
            D L+ F  +V +      SF   N VF  LI
Sbjct: 425 DDALRVFNRMVDVGLRVVASFG--NMVFGELI 454


>gb|AAS80150.1| ACT11D09.4 [Cucumis melo]
          Length = 896

 Score =  184 bits (468), Expect = 2e-44
 Identities = 120/272 (44%), Positives = 155/272 (56%), Gaps = 3/272 (1%)
 Frame = -3

Query: 815 TKGLVSANRLSEAVDLLHQMRARDSNINNFALVYANLISGYLESDELERANELFHEFIDN 636
           TKGL+ A R+ EAVDLL +M  +    ++  LV+ NLISG+L    L +ANELF E    
Sbjct: 222 TKGLIDAGRIEEAVDLLREMLNKGHGADS--LVFNNLISGFLNLGNLVKANELFDEL--- 276

Query: 635 PGDRHCVKDGYVYASFMEYYLDHNMEKEAMELYKSLLNRQLVMLSAVYNELLNVLLKHGK 456
             +R  V DG V A+FM+++ +   EKEAME YKSLL+RQ  M+ A  N LL VLLKH K
Sbjct: 277 -KERCLVYDGVVNATFMDWFFNQGKEKEAMESYKSLLDRQFKMVPATCNVLLEVLLKHEK 335

Query: 455 FVEANTLFDSIFKQDTP--FHTSNSHTFNIMVNHWFGVGKVSEALSVFNIYRDEPAPMYG 282
             EA TLFD +    TP  F   NS TFNIMVN  F +GK +EA+  F     +P     
Sbjct: 336 KTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKLGKFTEAVETFRKVGTQP----- 390

Query: 281 KLGPLYRDVVVHNNIIGKLFDTGMVAEAGELVDEVCSKLYFADVTTYTILFDAYFKQERI 102
           K  P   DV  +NNII +  + GM+A+A     E+CSK    DV T+  L ++Y K E+I
Sbjct: 391 KSRPFAMDVAGYNNIIARFCEQGMMADAETFFAELCSKSLSPDVPTHRTLIESYLKIEQI 450

Query: 101 RDVLKWFRHLV-LKTTFEPSFALVNSVFSRLI 9
            D L+ F  +V +      SF   N VF  LI
Sbjct: 451 DDALRVFNRMVDVGLRVVASFG--NMVFGELI 480


>ref|XP_003548343.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like [Glycine max]
          Length = 861

 Score =  179 bits (453), Expect = 9e-43
 Identities = 107/251 (42%), Positives = 146/251 (58%), Gaps = 2/251 (0%)
 Frame = -3

Query: 815 TKGLVSANRLSEAVDLLHQMRARDSNINNFALVYANLISGYLESDELERANELFHEFIDN 636
           TKGL+ ++R+SEA+DLL +M  +    ++  LVY NLISG+L  D  ++A ELF E    
Sbjct: 196 TKGLIQSSRISEALDLLREMLTKGHGADS--LVYNNLISGFLHLDNFDKAIELFEEL--- 250

Query: 635 PGDRHCVKDGYVYASFMEYYLDHNMEKEAMELYKSLLNRQLVMLSAVYNELLNVLLKHGK 456
             +R  V DG V A+FME++     +KEAM+ Y+SLL+RQ  M  A  N LL VLLKH K
Sbjct: 251 -KERCLVYDGVVNATFMEWFFGKGRDKEAMDSYRSLLDRQFRMTPATCNVLLEVLLKHSK 309

Query: 455 FVEANTLFDSIFKQDTP--FHTSNSHTFNIMVNHWFGVGKVSEALSVFNIYRDEPAPMYG 282
             EA +LF  +    TP  F   NS TFNIMVNH F +G   +AL+ F  +  +P     
Sbjct: 310 SNEAWSLFHLMLDNHTPPNFQAVNSDTFNIMVNHCFKLGNFEDALATFKKFGTKP----- 364

Query: 281 KLGPLYRDVVVHNNIIGKLFDTGMVAEAGELVDEVCSKLYFADVTTYTILFDAYFKQERI 102
              P   DV  +NNII +  + GM++ A  L +E+CSK    DV T+  L +AY +  RI
Sbjct: 365 NSKPFAMDVAGYNNIIARFSENGMLSHAETLFEELCSKSLSPDVPTHRTLIEAYLRMNRI 424

Query: 101 RDVLKWFRHLV 69
            D L+ F  +V
Sbjct: 425 DDALRIFNRMV 435


>ref|XP_003539383.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like [Glycine max]
          Length = 782

 Score =  173 bits (439), Expect = 4e-41
 Identities = 108/271 (39%), Positives = 152/271 (56%), Gaps = 2/271 (0%)
 Frame = -3

Query: 815 TKGLVSANRLSEAVDLLHQMRARDSNINNFALVYANLISGYLESDELERANELFHEFIDN 636
           TKGL+ + R+SEA+DLL +M ++    ++  LVY NLISG+L  D  ++A ELF E    
Sbjct: 196 TKGLIHSERISEALDLLREMLSKGHGADS--LVYNNLISGFLHLDNFDKAIELFDEL--- 250

Query: 635 PGDRHCVKDGYVYASFMEYYLDHNMEKEAMELYKSLLNRQLVMLSAVYNELLNVLLKHGK 456
             +R  V DG V A+FME++     +K+AM+ Y+SLL+RQ  M  A  N LL  LL H K
Sbjct: 251 -KERCLVYDGVVNATFMEWFFSKGRDKDAMDSYRSLLDRQFRMTPATCNVLLEALLNHSK 309

Query: 455 FVEANTLFDSIFKQDTP--FHTSNSHTFNIMVNHWFGVGKVSEALSVFNIYRDEPAPMYG 282
             EA +LFD++    TP  F   NS +FNIMVNH F +G    ALS F     +P     
Sbjct: 310 TSEAWSLFDNMLDNHTPPNFQAVNSDSFNIMVNHCFKLGNFELALSTFKKVGSKP----- 364

Query: 281 KLGPLYRDVVVHNNIIGKLFDTGMVAEAGELVDEVCSKLYFADVTTYTILFDAYFKQERI 102
              P   DV  +NNII +  +  M+++A  L +E+CSK    DV T+  L + Y + +RI
Sbjct: 365 NSKPFAMDVAGYNNIIARFCENAMLSQAETLFEELCSKSLSPDVPTHRTLIEVYLRMDRI 424

Query: 101 RDVLKWFRHLVLKTTFEPSFALVNSVFSRLI 9
            D L+ F H ++ +         N+VF  LI
Sbjct: 425 DDALRIF-HRMVDSGLRVVATFGNTVFHELI 454