BLASTX nr result
ID: Coptis24_contig00016069
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00016069
(899 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like... 319 6e-85
emb|CBI35900.3| unnamed protein product [Vitis vinifera] 317 2e-84
ref|NP_176883.5| AAA ATPase containing von Willebrand factor typ... 243 3e-62
gb|AAD10657.1| Hypothetical protein [Arabidopsis thaliana] 243 3e-62
ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|2... 235 9e-60
>ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Vitis vinifera]
Length = 5286
Score = 319 bits (817), Expect = 6e-85
Identities = 160/314 (50%), Positives = 219/314 (69%), Gaps = 20/314 (6%)
Frame = +1
Query: 16 FDLALVNKMLLFAANWTIEQANEGDIKLYLHWFSLYSSQLHPYCRFFESYLSILKQELSH 195
F+ AL++KMLLFAANWTIEQA E D+KLYL WFS ++S+L P+C+FF S+L+ LK+EL H
Sbjct: 2473 FNAALIDKMLLFAANWTIEQATESDLKLYLLWFSWFNSRLLPFCQFFNSFLTQLKEELKH 2532
Query: 196 RIWNWIFDCRRELITHCAVDIDFRPISVLSLKILDFRASDESLQRLKKRLYNSVVCVELL 375
IWN I C RELI+H VD+D +PI +LSL+++D SD+ + +RL N++ + LL
Sbjct: 2533 SIWNCIIGCYRELISHHQVDLDSQPIPMLSLELVDLIGSDDMSKISSRRLCNAINSIGLL 2592
Query: 376 RHSLQQWNAEDDHNHREEN-TFSPVLESLRELEKEVLDKLVDSPSFDLLFQIYSNVIEHH 552
R SLQQWNAE +N +E+ ++ PVL SL+ LE EVL+ LV+SPSFDLL Q+ +N++E H
Sbjct: 2593 RRSLQQWNAESGYNFTDESRSYIPVLRSLQVLEDEVLNALVESPSFDLLIQLLTNLLEDH 2652
Query: 553 SLLWNGIISSDYECVILSWRSLKKYVMKLQSFFPKAVENLLVRSIGLGNISAWNLQSVKS 732
L WN + SS ++ +++SW SL K MKL+ FFPK+V++LLVRS L +S W+L S KS
Sbjct: 2653 ILFWNSVTSSKFDYLLISWHSLMKDAMKLRDFFPKSVKHLLVRSY-LDRVSLWHLHSQKS 2711
Query: 733 MLWVNGGHPLLPSSADTYSMRQQLLQFCQLGWPTNTVSWKQ------------------- 855
+LWV GGHP +PSSAD Y + +LL FC+ WPT T SW+Q
Sbjct: 2712 LLWVYGGHPNMPSSADLYWKQHKLLCFCEFVWPTKTKSWEQVDDRVIDAVVSSSPDLRFL 2771
Query: 856 ASSGVCMTSFLTSK 897
A GVCM+S++T +
Sbjct: 2772 AMQGVCMSSYITGR 2785
>emb|CBI35900.3| unnamed protein product [Vitis vinifera]
Length = 5267
Score = 317 bits (812), Expect = 2e-84
Identities = 157/314 (50%), Positives = 217/314 (69%), Gaps = 20/314 (6%)
Frame = +1
Query: 16 FDLALVNKMLLFAANWTIEQANEGDIKLYLHWFSLYSSQLHPYCRFFESYLSILKQELSH 195
F+ AL++KMLLFAANWTIEQA E D+KLYL WFS ++S+L P+C+FF S+L+ LK+EL H
Sbjct: 2425 FNAALIDKMLLFAANWTIEQATESDLKLYLLWFSWFNSRLLPFCQFFNSFLTQLKEELKH 2484
Query: 196 RIWNWIFDCRRELITHCAVDIDFRPISVLSLKILDFRASDESLQRLKKRLYNSVVCVELL 375
IWN I C RELI+H VD+D +PI +LSL+++D SD+ + +RL N++ + LL
Sbjct: 2485 SIWNCIIGCYRELISHHQVDLDSQPIPMLSLELVDLIGSDDMSKISSRRLCNAINSIGLL 2544
Query: 376 RHSLQQWNAEDDHNHREEN-TFSPVLESLRELEKEVLDKLVDSPSFDLLFQIYSNVIEHH 552
R SLQQWNAE +N +E+ ++ PVL SL+ LE EVL+ LV+SPSFDLL Q+ +N++E H
Sbjct: 2545 RRSLQQWNAESGYNFTDESRSYIPVLRSLQVLEDEVLNALVESPSFDLLIQLLTNLLEDH 2604
Query: 553 SLLWNGIISSDYECVILSWRSLKKYVMKLQSFFPKAVENLLVRSIGLGNISAWNLQSVKS 732
L WN + SS ++ +++SW SL K MKL+ FFPK+V++LL+ L +S W+L S KS
Sbjct: 2605 ILFWNSVTSSKFDYLLISWHSLMKDAMKLRDFFPKSVKHLLMEVRDLDRVSLWHLHSQKS 2664
Query: 733 MLWVNGGHPLLPSSADTYSMRQQLLQFCQLGWPTNTVSWKQ------------------- 855
+LWV GGHP +PSSAD Y + +LL FC+ WPT T SW+Q
Sbjct: 2665 LLWVYGGHPNMPSSADLYWKQHKLLCFCEFVWPTKTKSWEQVDDRVIDAVVSSSPDLRFL 2724
Query: 856 ASSGVCMTSFLTSK 897
A GVCM+S++T +
Sbjct: 2725 AMQGVCMSSYITGR 2738
>ref|NP_176883.5| AAA ATPase containing von Willebrand factor type A domain-containing
protein [Arabidopsis thaliana]
gi|332196477|gb|AEE34598.1| AAA ATPase containing von
Willebrand factor type A domain-containing protein
[Arabidopsis thaliana]
Length = 5393
Score = 243 bits (621), Expect = 3e-62
Identities = 126/278 (45%), Positives = 177/278 (63%)
Frame = +1
Query: 13 NFDLALVNKMLLFAANWTIEQANEGDIKLYLHWFSLYSSQLHPYCRFFESYLSILKQELS 192
NF+ L +KMLLFAANWTIEQA E DI+LYL WFS + S+L +C F +L+ LK E
Sbjct: 2565 NFENDLASKMLLFAANWTIEQATEEDIQLYLAWFSWFGSRLQQHCPFLLCFLNTLKVEFE 2624
Query: 193 HRIWNWIFDCRRELITHCAVDIDFRPISVLSLKILDFRASDESLQRLKKRLYNSVVCVEL 372
H IWN I CR+ L C +D D PI +LS K++D AS++ + K L+ S+ V +
Sbjct: 2625 HPIWNHISRCRKNLKFLCRLDPDAVPIPMLSSKLIDVAASNDQSKPYSKSLFESLNSVGV 2684
Query: 373 LRHSLQQWNAEDDHNHREENTFSPVLESLRELEKEVLDKLVDSPSFDLLFQIYSNVIEHH 552
LR S QQW E + NH + +TF+ L+SLR LEK++L ++V +PSF +L Q+Y+ VI++H
Sbjct: 2685 LRRSYQQWLVESNDNHTDVSTFTRFLDSLRVLEKKILCEIVGAPSFSVLIQLYTEVIDNH 2744
Query: 553 SLLWNGIISSDYECVILSWRSLKKYVMKLQSFFPKAVENLLVRSIGLGNISAWNLQSVKS 732
S W+G++SS E ++ S+ SL K + K+ SFFP V+ +L S + NI + KS
Sbjct: 2745 SFFWSGLVSSSDEYLLFSFWSLIKSIKKMHSFFPGEVQVVLEESKNINNI-VLHGHPEKS 2803
Query: 733 MLWVNGGHPLLPSSADTYSMRQQLLQFCQLGWPTNTVS 846
MLW GGHP LP SA+ + +Q+ LQ C WP + S
Sbjct: 2804 MLWAYGGHPSLPVSAELFHKQQEFLQLCSTVWPLKSES 2841
>gb|AAD10657.1| Hypothetical protein [Arabidopsis thaliana]
Length = 5138
Score = 243 bits (621), Expect = 3e-62
Identities = 126/278 (45%), Positives = 177/278 (63%)
Frame = +1
Query: 13 NFDLALVNKMLLFAANWTIEQANEGDIKLYLHWFSLYSSQLHPYCRFFESYLSILKQELS 192
NF+ L +KMLLFAANWTIEQA E DI+LYL WFS + S+L +C F +L+ LK E
Sbjct: 2353 NFENDLASKMLLFAANWTIEQATEEDIQLYLAWFSWFGSRLQQHCPFLLCFLNTLKVEFE 2412
Query: 193 HRIWNWIFDCRRELITHCAVDIDFRPISVLSLKILDFRASDESLQRLKKRLYNSVVCVEL 372
H IWN I CR+ L C +D D PI +LS K++D AS++ + K L+ S+ V +
Sbjct: 2413 HPIWNHISRCRKNLKFLCRLDPDAVPIPMLSSKLIDVAASNDQSKPYSKSLFESLNSVGV 2472
Query: 373 LRHSLQQWNAEDDHNHREENTFSPVLESLRELEKEVLDKLVDSPSFDLLFQIYSNVIEHH 552
LR S QQW E + NH + +TF+ L+SLR LEK++L ++V +PSF +L Q+Y+ VI++H
Sbjct: 2473 LRRSYQQWLVESNDNHTDVSTFTRFLDSLRVLEKKILCEIVGAPSFSVLIQLYTEVIDNH 2532
Query: 553 SLLWNGIISSDYECVILSWRSLKKYVMKLQSFFPKAVENLLVRSIGLGNISAWNLQSVKS 732
S W+G++SS E ++ S+ SL K + K+ SFFP V+ +L S + NI + KS
Sbjct: 2533 SFFWSGLVSSSDEYLLFSFWSLIKSIKKMHSFFPGEVQVVLEESKNINNI-VLHGHPEKS 2591
Query: 733 MLWVNGGHPLLPSSADTYSMRQQLLQFCQLGWPTNTVS 846
MLW GGHP LP SA+ + +Q+ LQ C WP + S
Sbjct: 2592 MLWAYGGHPSLPVSAELFHKQQEFLQLCSTVWPLKSES 2629
>ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|222837340|gb|EEE75719.1|
predicted protein [Populus trichocarpa]
Length = 5317
Score = 235 bits (600), Expect = 9e-60
Identities = 126/313 (40%), Positives = 187/313 (59%), Gaps = 20/313 (6%)
Frame = +1
Query: 19 DLALVNKMLLFAANWTIEQANEGDIKLYLHWFSLYSSQLHPYCRFFESYLSILKQELSHR 198
D+ L +MLLFAANWTIEQA D KLYL FS +SS+L FF S+L +L+QEL H
Sbjct: 2518 DMKLTKRMLLFAANWTIEQATGSDYKLYLLHFSWFSSKLQSCDNFFRSFLHLLEQELEHP 2577
Query: 199 IWNWIFDCRRELITHCAVDIDFRPISVLSLKILDFRASDESLQRLKKRLYNSVVCVELLR 378
IW IF EL + A D +LSL +D S + + K L N++ C++LLR
Sbjct: 2578 IWKCIFHSFHELASLPAADSSLHLTPLLSLDFVDLTMSYDRPEVSHKFLCNAINCIDLLR 2637
Query: 379 HSLQQWNAEDDHNH-REENTFSPVLESLRELEKEVLDKLVDSPSFDLLFQIYSNVIEHHS 555
S QQWNA+ +H + E F PVL++L+ELEKE+L+ LV+SPS+++L ++YS+++E H
Sbjct: 2638 LSYQQWNAQREHEYTNEAQHFKPVLDALQELEKEILNMLVESPSYNVLIKLYSDILEDHL 2697
Query: 556 LLWNGIISSDYECVILSWRSLKKYVMKLQSFFPKAVENLLVRSIGLGNISAWNLQSVKSM 735
W+ SS +E + SW SL K V+KL+ F P AV+NL + + + N S +S+
Sbjct: 2698 TFWDVFTSSRFEKLPFSWHSLMKDVLKLRDFCPGAVDNLFMIAENID--KKLNQHSQQSL 2755
Query: 736 LWVNGGHPLLPSSADTYSMRQQLLQFCQLGWPTNTVSWKQ-------------------A 858
LW++GGHP+LP+SA+ + +Q ++ C+ WPT + Q A
Sbjct: 2756 LWIHGGHPILPASAELFKQQQLFIELCESVWPTKANPYNQGDDCLVELATSSTPELRFLA 2815
Query: 859 SSGVCMTSFLTSK 897
G+CM++++TS+
Sbjct: 2816 VQGICMSAYITSR 2828