BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016059
         (833 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containi...   309   6e-82
emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]   303   2e-80
ref|XP_002532584.1| pentatricopeptide repeat-containing protein,...   284   2e-74
dbj|BAD08027.1| putative pentatricopeptide (PPR) repeat-containi...   253   5e-65
gb|EEC72399.1| hypothetical protein OsI_05688 [Oryza sativa Indi...   253   5e-65

>ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
            [Vitis vinifera]
          Length = 881

 Score =  309 bits (791), Expect = 6e-82
 Identities = 158/274 (57%), Positives = 210/274 (76%)
 Frame = +1

Query: 1    FIDGAGHAKKPDLAREVFEMMARNGIEHNNDTKFFMMQSYLKGERIADALNFYNDLCKKS 180
            FIDGAGHAKKP+LAREVFEMM R+GI  N  +   M+QSYLK ERI+DALNF++DL K+ 
Sbjct: 604  FIDGAGHAKKPELAREVFEMMVRSGIVPNLSSDILMLQSYLKNERISDALNFFSDLQKRR 663

Query: 181  KKGNPGRKLNNTMVVGLSKANRPDLALEVLRDLREKGLLPSLESYEELVRSFCTVENYDM 360
            K G   RKL NTMVVGL KAN+ D+ALE+L+++REKG+ PSLE YEELV+  CT + YD+
Sbjct: 664  KVG---RKLCNTMVVGLCKANKVDIALEILKEIREKGVTPSLECYEELVKVLCTNKRYDV 720

Query: 361  VVEVVDDLLKTGRKVSSFIGNTLLLHSVRSRELYQAWVQSGNVTTEASPSGDLTLGELIG 540
            VV ++DDL + GR VSSFIGN LLLHS+++ EL++ WV + +   E S S +L LG+LIG
Sbjct: 721  VVNLIDDLERVGRHVSSFIGNVLLLHSLKTPELFETWVHAKDAHNEIS-SPNLILGQLIG 779

Query: 541  LFSGVYKVNEPLEDLDEVIEQCFPLDNFTYNTLLRRLSMTNRLDSFVELFNKMRKKGYQP 720
             FSG   VN+    L+EV++QCFPLD +TYN LLRRL+ ++ +D  +ELFN++ +KGY+P
Sbjct: 780  EFSGCIGVNQDFNYLEEVMQQCFPLDLYTYNMLLRRLTRSD-MDLALELFNRICQKGYEP 838

Query: 721  DSYTYNIVVQSLCKHGRRNEAMRWVEEIHRMGFD 822
            + +TY+I+V  L KHGR +EA +WVEE+   GF+
Sbjct: 839  NRWTYDILVHGLFKHGRTSEANKWVEEMFCKGFE 872



 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 54/240 (22%), Positives = 114/240 (47%), Gaps = 9/240 (3%)
 Frame = +1

Query: 124  KGERIADALNFYNDLCKKSKKGNPGRKLNNTMVVGLSKANRPDLALEVLRDLREKGLLPS 303
            K  R+ D      +L K +K  +     N  M+ G +  NR D+A  +L +L+EKG  P+
Sbjct: 505  KARRVDDGYLIQGELNKINKVASKNTYFN--MIRGFNILNRADIAARLLIELQEKGHTPT 562

Query: 304  LESYEELVRSFCTVENYDMVVEVVDDLLKTGRKVSSFIGNTLL---LHSVR---SRELYQ 465
               +  ++   C ++N +     + +L  + ++ +  + N  +    H+ +   +RE+++
Sbjct: 563  RSLFRAVICRLCDMDNAEKQFLKLLELQLSHQEPNCQVYNFFIDGAGHAKKPELAREVFE 622

Query: 466  AWVQSGNVTTEASPSGDLTLGELIGLFSGVYKVNEPLED---LDEVIEQCFPLDNFTYNT 636
              V+SG V   +S        +++ L S  Y  NE + D       +++   +     NT
Sbjct: 623  MMVRSGIVPNLSS--------DILMLQS--YLKNERISDALNFFSDLQKRRKVGRKLCNT 672

Query: 637  LLRRLSMTNRLDSFVELFNKMRKKGYQPDSYTYNIVVQSLCKHGRRNEAMRWVEEIHRMG 816
            ++  L   N++D  +E+  ++R+KG  P    Y  +V+ LC + R +  +  ++++ R+G
Sbjct: 673  MVVGLCKANKVDIALEILKEIREKGVTPSLECYEELVKVLCTNKRYDVVVNLIDDLERVG 732


>emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]
          Length = 1173

 Score =  303 bits (777), Expect = 2e-80
 Identities = 156/272 (57%), Positives = 207/272 (76%)
 Frame = +1

Query: 1    FIDGAGHAKKPDLAREVFEMMARNGIEHNNDTKFFMMQSYLKGERIADALNFYNDLCKKS 180
            FIDGAGHAKKP+LAREVFEMM R+GI  N  +   M+QSYLK ERI+DALNF++DL K+ 
Sbjct: 604  FIDGAGHAKKPELAREVFEMMVRSGIVPNLSSDILMLQSYLKNERISDALNFFSDLQKRR 663

Query: 181  KKGNPGRKLNNTMVVGLSKANRPDLALEVLRDLREKGLLPSLESYEELVRSFCTVENYDM 360
            K G   RKL NTMVVGL KAN+ D+ALE+L+++REKG+ PSLE YEELV+  C  + YD+
Sbjct: 664  KVG---RKLCNTMVVGLCKANKVDIALEILKEIREKGVTPSLECYEELVKVLCKNKRYDV 720

Query: 361  VVEVVDDLLKTGRKVSSFIGNTLLLHSVRSRELYQAWVQSGNVTTEASPSGDLTLGELIG 540
            VV ++DDL + GR VSSFIGN LLLHS+++ EL++ WV + +   E S S +L LG+LIG
Sbjct: 721  VVNLIDDLERVGRHVSSFIGNVLLLHSLKTPELFETWVHAKDAHNEIS-SPNLILGQLIG 779

Query: 541  LFSGVYKVNEPLEDLDEVIEQCFPLDNFTYNTLLRRLSMTNRLDSFVELFNKMRKKGYQP 720
             FSG   VN+    L+EV++QCFPLD +TYN LLRRL+ ++ +D  +ELFN++ +KGY+P
Sbjct: 780  EFSGCIGVNQDFNYLEEVMQQCFPLDLYTYNMLLRRLTRSD-MDLALELFNRICQKGYEP 838

Query: 721  DSYTYNIVVQSLCKHGRRNEAMRWVEEIHRMG 816
            + +TY+I+V  L KHGR +EA +WVEE+   G
Sbjct: 839  NRWTYDILVHGLFKHGRTSEANKWVEEMFCKG 870



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 55/240 (22%), Positives = 115/240 (47%), Gaps = 9/240 (3%)
 Frame = +1

Query: 124  KGERIADALNFYNDLCKKSKKGNPGRKLNNTMVVGLSKANRPDLALEVLRDLREKGLLPS 303
            K  R+ D      +L K +K  +     N  M+ G +  NR D+A  +L +L+EKG  P+
Sbjct: 505  KARRVDDGYLIQGELNKINKVASKNTYFN--MIRGFNILNRADIAARLLIELQEKGHTPT 562

Query: 304  LESYEELVRSFCTVENYDMVVEVVDDLLKTGRKVSSFIGNTLL---LHSVR---SRELYQ 465
               +  ++   C ++N +     + +L  + ++ +  + N  +    H+ +   +RE+++
Sbjct: 563  RSLFRAVICRLCDMDNAEKQFLKLLELQLSHQEPNCQVYNFFIDGAGHAKKPELAREVFE 622

Query: 466  AWVQSGNVTTEASPSGDLTLGELIGLFSGVYKVNEPLED---LDEVIEQCFPLDNFTYNT 636
              V+SG V   +S        +++ L S  Y  NE + D       +++   +     NT
Sbjct: 623  MMVRSGIVPNLSS--------DILMLQS--YLKNERISDALNFFSDLQKRRKVGRKLCNT 672

Query: 637  LLRRLSMTNRLDSFVELFNKMRKKGYQPDSYTYNIVVQSLCKHGRRNEAMRWVEEIHRMG 816
            ++  L   N++D  +E+  ++R+KG  P    Y  +V+ LCK+ R +  +  ++++ R+G
Sbjct: 673  MVVGLCKANKVDIALEILKEIREKGVTPSLECYEELVKVLCKNKRYDVVVNLIDDLERVG 732


>ref|XP_002532584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527693|gb|EEF29801.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 895

 Score =  284 bits (726), Expect = 2e-74
 Identities = 145/273 (53%), Positives = 199/273 (72%)
 Frame = +1

Query: 1    FIDGAGHAKKPDLAREVFEMMARNGIEHNNDTKFFMMQSYLKGERIADALNFYNDLCKKS 180
            FIDGAGHAKKPD+AR+VFEMM R+GIE N  T   M+QSYLK ERI+DALNF++ + ++ 
Sbjct: 618  FIDGAGHAKKPDIARKVFEMMQRSGIEPNQSTNILMLQSYLKSERISDALNFFDAVGQRR 677

Query: 181  KKGNPGRKLNNTMVVGLSKANRPDLALEVLRDLREKGLLPSLESYEELVRSFCTVENYDM 360
            K G   RKL NTMVVGL K N+ D AL    +++  G++PS+E YE L+   C+ + Y  
Sbjct: 678  KIG---RKLYNTMVVGLCKVNKVDSALSFFLEMQSNGMVPSVECYEVLIMLLCSNKRYST 734

Query: 361  VVEVVDDLLKTGRKVSSFIGNTLLLHSVRSRELYQAWVQSGNVTTEASPSGDLTLGELIG 540
             + ++ DL K GR+V+SFIGN LLLHS++S ELY AW+Q   V  E S    L LG++IG
Sbjct: 735  AITLITDLEKFGRRVTSFIGNILLLHSLKSDELYDAWLQVREVQNETS-LNLLILGQIIG 793

Query: 541  LFSGVYKVNEPLEDLDEVIEQCFPLDNFTYNTLLRRLSMTNRLDSFVELFNKMRKKGYQP 720
             F+G  K+++ +++L+EVIEQCFPLD +TYN L+RRLSM+N +D   ELF+++ +KGY+P
Sbjct: 794  AFAGRLKLSQQIDNLEEVIEQCFPLDLYTYNMLMRRLSMSN-IDHARELFDRICQKGYEP 852

Query: 721  DSYTYNIVVQSLCKHGRRNEAMRWVEEIHRMGF 819
            + +TY+I+V  L K+GR  EA RWV+E+ R GF
Sbjct: 853  NHWTYDILVHGLFKNGRIGEARRWVDEMFRKGF 885


>dbj|BAD08027.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group]
          Length = 903

 Score =  253 bits (645), Expect = 5e-65
 Identities = 127/278 (45%), Positives = 185/278 (66%), Gaps = 5/278 (1%)
 Frame = +1

Query: 1    FIDGAGHAKKPDLAREVFEMMARNGIEHNNDTKFFMMQSYLKGERIADALNFYNDLCKKS 180
            FI GAGHAKK D+AREV+  M  +G+E + D+   ++ SYL+ +RI DALNF+N +  K 
Sbjct: 603  FIAGAGHAKKADMAREVYNQMEYSGLEPSGDSNVLLLMSYLRSKRIGDALNFFNFIRDKK 662

Query: 181  KKGNPGRKLNNTMVVGLSKANRPDLALEVLRDLREKGLLPSLESYEELVRSFCTVENYDM 360
                PG KL N  + GL +A +P+ A+   R+ REKGL+PS+  YE+LV   C+V++YD 
Sbjct: 663  ---TPGTKLYNVFISGLCEAQKPEQAMVFWREAREKGLVPSISCYEQLVLLLCSVKDYDN 719

Query: 361  VVEVVDDLLKTGRKVSSFIGNTLLLHSVRSRELYQAWVQSGNVTT-----EASPSGDLTL 525
            VV+V+DD  +TGR VS+F+ N LLLH++R  +L +AW +S   T      +    G   +
Sbjct: 720  VVKVIDDFKETGRPVSAFLCNVLLLHTLRGSDLLKAWKRSEQATVKPEEIQGKGVGRFLI 779

Query: 526  GELIGLFSGVYKVNEPLEDLDEVIEQCFPLDNFTYNTLLRRLSMTNRLDSFVELFNKMRK 705
            GELI +F+G  +    LEDL+E +E+ FP+D +TYN LLR LSM  R+DS   LF ++ +
Sbjct: 780  GELIMMFAGGIRNMNDLEDLEEDLEKHFPVDVYTYNMLLRGLSMVGRMDSACNLFERLCR 839

Query: 706  KGYQPDSYTYNIVVQSLCKHGRRNEAMRWVEEIHRMGF 819
            KGY+P+ +T++I+V   CK+  R+EA RW+E +HR GF
Sbjct: 840  KGYEPNRWTFDIMVHGFCKNSDRDEAERWMEAMHRNGF 877


>gb|EEC72399.1| hypothetical protein OsI_05688 [Oryza sativa Indica Group]
          Length = 831

 Score =  253 bits (645), Expect = 5e-65
 Identities = 127/278 (45%), Positives = 185/278 (66%), Gaps = 5/278 (1%)
 Frame = +1

Query: 1    FIDGAGHAKKPDLAREVFEMMARNGIEHNNDTKFFMMQSYLKGERIADALNFYNDLCKKS 180
            FI GAGHAKK D+AREV+  M  +G+E + D+   ++ SYL+ +RI DALNF+N +  K 
Sbjct: 531  FIAGAGHAKKADMAREVYNQMEYSGLEPSGDSNVLLLMSYLRSKRIGDALNFFNFIRDKK 590

Query: 181  KKGNPGRKLNNTMVVGLSKANRPDLALEVLRDLREKGLLPSLESYEELVRSFCTVENYDM 360
                PG KL N  + GL +A +P+ A+   R+ REKGL+PS+  YE+LV   C+V++YD 
Sbjct: 591  ---TPGTKLYNVFISGLCEAQKPEQAMVFWREAREKGLVPSISCYEQLVLLLCSVKDYDN 647

Query: 361  VVEVVDDLLKTGRKVSSFIGNTLLLHSVRSRELYQAWVQSGNVTT-----EASPSGDLTL 525
            VV+V+DD  +TGR VS+F+ N LLLH++R  +L +AW +S   T      +    G   +
Sbjct: 648  VVKVIDDFKETGRPVSAFLCNVLLLHTLRGSDLLKAWKRSEQATVKPEEIQGKGVGRFLI 707

Query: 526  GELIGLFSGVYKVNEPLEDLDEVIEQCFPLDNFTYNTLLRRLSMTNRLDSFVELFNKMRK 705
            GELI +F+G  +    LEDL+E +E+ FP+D +TYN LLR LSM  R+DS   LF ++ +
Sbjct: 708  GELIMMFAGGIRNMNDLEDLEEDLEKHFPVDVYTYNMLLRGLSMVGRMDSACNLFERLCR 767

Query: 706  KGYQPDSYTYNIVVQSLCKHGRRNEAMRWVEEIHRMGF 819
            KGY+P+ +T++I+V   CK+  R+EA RW+E +HR GF
Sbjct: 768  KGYEPNRWTFDIMVHGFCKNSDRDEAERWMEAMHRNGF 805