BLASTX nr result

ID: Coptis24_contig00016058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016058
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533279.1| serine-threonine protein kinase, plant-type,...   119   3e-25
ref|XP_002281880.1| PREDICTED: probable LRR receptor-like serine...   116   2e-24
ref|XP_003544429.1| PREDICTED: leucine-rich repeat receptor prot...   108   3e-22
ref|XP_002326901.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-21
ref|XP_003549419.1| PREDICTED: leucine-rich repeat receptor prot...   104   6e-21

>ref|XP_002533279.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223526904|gb|EEF29111.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 617

 Score =  119 bits (298), Expect = 3e-25
 Identities = 57/92 (61%), Positives = 72/92 (78%)
 Frame = +2

Query: 2   YNSVLTISKLTSSDPSELAIINNASTHTVFPTGKEVIVPVNCFCSGQYYQANSSYVTLSR 181
           Y++V +ISKLTSSDP ELA+INN S  TV PT KEVIVP+ C CS QYYQAN+SY+  S 
Sbjct: 67  YHTVSSISKLTSSDPLELALINNISNFTVLPTNKEVIVPIICSCSSQYYQANTSYIIPSI 126

Query: 182 DDSYYTIANNTYQGLSSCNSLVNENAYGERDL 277
            D+Y++IA +TY+GLS+CNSL+ +N Y E  L
Sbjct: 127 YDTYFSIAESTYEGLSTCNSLMRQNNYSEFSL 158


>ref|XP_002281880.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g07650-like [Vitis vinifera]
          Length = 622

 Score =  116 bits (291), Expect = 2e-24
 Identities = 57/92 (61%), Positives = 67/92 (72%)
 Frame = +2

Query: 2   YNSVLTISKLTSSDPSELAIINNASTHTVFPTGKEVIVPVNCFCSGQYYQANSSYVTLSR 181
           YNSV TIS L SS+P ELA IN+  T TVFPTGKEVIVPVNC C GQYYQAN+++     
Sbjct: 67  YNSVPTISMLMSSNPGELARINSVKTLTVFPTGKEVIVPVNCSCLGQYYQANTTFHIQDN 126

Query: 182 DDSYYTIANNTYQGLSSCNSLVNENAYGERDL 277
             +Y+ I NNTYQGLS+C+SL+  N Y E  L
Sbjct: 127 QQTYFIIGNNTYQGLSTCDSLMRANRYSEFSL 158


>ref|XP_003544429.1| PREDICTED: leucine-rich repeat receptor protein kinase EXS-like
           [Glycine max]
          Length = 636

 Score =  108 bits (271), Expect = 3e-22
 Identities = 52/94 (55%), Positives = 74/94 (78%), Gaps = 1/94 (1%)
 Frame = +2

Query: 2   YNSVLTISKLTSSDPSELAIINNASTHTVFPTGKEVIVPVNCFC-SGQYYQANSSYVTLS 178
           +NS+ TIS LTSS+P ELA IN+ +   VFPTGKEVIVP+NC C + +YYQA + YV L 
Sbjct: 69  FNSITTISNLTSSNPEELARINDVTVLKVFPTGKEVIVPLNCSCLTREYYQAETKYV-LG 127

Query: 179 RDDSYYTIANNTYQGLSSCNSLVNENAYGERDLL 280
           +  +Y+T+AN+T++GL++C++L+  N+YGE DLL
Sbjct: 128 QSPTYFTVANDTFEGLTTCDTLMRANSYGELDLL 161


>ref|XP_002326901.1| predicted protein [Populus trichocarpa] gi|222835216|gb|EEE73651.1|
           predicted protein [Populus trichocarpa]
          Length = 609

 Score =  105 bits (263), Expect = 3e-21
 Identities = 52/93 (55%), Positives = 67/93 (72%)
 Frame = +2

Query: 2   YNSVLTISKLTSSDPSELAIINNASTHTVFPTGKEVIVPVNCFCSGQYYQANSSYVTLSR 181
           +NSV +IS LTS++  ELA INN +  + FPT  EVIVPVNCFC GQYYQAN++    + 
Sbjct: 67  FNSVPSISALTSANQEELARINNVTRLSEFPTNNEVIVPVNCFCFGQYYQANTTIQVTTT 126

Query: 182 DDSYYTIANNTYQGLSSCNSLVNENAYGERDLL 280
             +YY IAN TY+GLS+C +L + N +GE DLL
Sbjct: 127 RGTYYVIANETYEGLSTCAALKHLNIHGEYDLL 159


>ref|XP_003549419.1| PREDICTED: leucine-rich repeat receptor protein kinase EXS-like
           [Glycine max]
          Length = 633

 Score =  104 bits (260), Expect = 6e-21
 Identities = 52/93 (55%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
 Frame = +2

Query: 2   YNSVLTISKLTSSDPSELAIINNASTHTVFPTGKEVIVPVNCFC-SGQYYQANSSYVTLS 178
           +NS+ TIS LTSS+P ELA IN+ +   VFPTGKEV+VP+NC C +  YYQA ++YV L 
Sbjct: 69  FNSIATISNLTSSNPEELARINDVNVLKVFPTGKEVLVPLNCSCLTRDYYQAETNYV-LG 127

Query: 179 RDDSYYTIANNTYQGLSSCNSLVNENAYGERDL 277
           +  +Y T+AN+T QGL++C+SL+  N YGE DL
Sbjct: 128 QSPTYLTVANDTLQGLTTCDSLMRANPYGELDL 160


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