BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016038
         (725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306249.1| predicted protein [Populus trichocarpa] gi|1...   238   7e-61
ref|XP_003631913.1| PREDICTED: photosystem I reaction center sub...   238   1e-60
gb|ACZ72945.1| photosystem I reaction center subunit [Nicotiana ...   235   8e-60
ref|XP_003602547.1| Photosystem I reaction center subunit N [Med...   234   1e-59
ref|XP_002309915.1| predicted protein [Populus trichocarpa] gi|2...   232   5e-59

>ref|XP_002306249.1| predicted protein [Populus trichocarpa] gi|118486634|gb|ABK95154.1|
           unknown [Populus trichocarpa]
           gi|222855698|gb|EEE93245.1| predicted protein [Populus
           trichocarpa]
          Length = 172

 Score =  238 bits (608), Expect = 7e-61
 Identities = 125/172 (72%), Positives = 140/172 (81%), Gaps = 5/172 (2%)
 Frame = +1

Query: 112 MAAVNSSVLACNYAI--TGASDLSFKHASTASVALPV--GTKLPMIKAQQARV-SEGKGS 276
           MAA+NSSVLACNYAI  TG+S+L+ K  S  +VA PV  G KLP+I+AQQAR  S+   +
Sbjct: 1   MAAMNSSVLACNYAISGTGSSELNAKIVSMPAVASPVVSGPKLPIIRAQQARADSKEMKA 60

Query: 277 DDGRRXXXXXXXXXXXXSTVSTSSANAGVIDEYLEKSKANKELNDKKRLATSGANFARAY 456
            +GRR            S  + +SANAGVI++YLEKSKANKELNDKKRLATSGANFARAY
Sbjct: 61  SEGRRAALVYLAATLFTSAAAAASANAGVIEDYLEKSKANKELNDKKRLATSGANFARAY 120

Query: 457 TVQFGTCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDKFKCGSNVFWKW 612
           TVQFGTCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDK+KCGSNVFWKW
Sbjct: 121 TVQFGTCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDKYKCGSNVFWKW 172


>ref|XP_003631913.1| PREDICTED: photosystem I reaction center subunit N, chloroplastic
           [Vitis vinifera]
          Length = 173

 Score =  238 bits (606), Expect = 1e-60
 Identities = 123/173 (71%), Positives = 139/173 (80%), Gaps = 6/173 (3%)
 Frame = +1

Query: 112 MAAVNSSVLACNYAITGAS--DLSFKHASTASVALPV--GTKLPMIKAQQARVSEGK--G 273
           MA+VNSSVLACNYAI+GA   +L+ K  S  S A P   G KLP I+AQQARVS+ K  G
Sbjct: 1   MASVNSSVLACNYAISGAGAPELNSKLVSMPSAASPAVAGLKLPAIRAQQARVSDSKKWG 60

Query: 274 SDDGRRXXXXXXXXXXXXSTVSTSSANAGVIDEYLEKSKANKELNDKKRLATSGANFARA 453
           + +GRR            +  ++SSANAGVID+YLEKSKANKELNDKKRLATSGANFARA
Sbjct: 61  AGEGRRAALVYLAATLFTTAAASSSANAGVIDDYLEKSKANKELNDKKRLATSGANFARA 120

Query: 454 YTVQFGTCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDKFKCGSNVFWKW 612
           YTVQFGTCKFPENFTGCQDLAK+KKVPF+SEDL LECEG+DK+KCGSNVFWKW
Sbjct: 121 YTVQFGTCKFPENFTGCQDLAKKKKVPFLSEDLELECEGRDKYKCGSNVFWKW 173


>gb|ACZ72945.1| photosystem I reaction center subunit [Nicotiana tabacum]
          Length = 168

 Score =  235 bits (599), Expect = 8e-60
 Identities = 123/171 (71%), Positives = 139/171 (81%), Gaps = 4/171 (2%)
 Frame = +1

Query: 112 MAAVNSSVLACNYAITG--ASDLSFKHASTASVALPVGTKLPMIKAQQARV--SEGKGSD 279
           MAA+NSSVLAC+YA++G  AS+L+ KHAS AS ++    K P+IKAQQ++V  SE   + 
Sbjct: 1   MAAMNSSVLACSYAVSGIGASELTSKHASIASQSVQ---KWPVIKAQQSKVLDSEANKNQ 57

Query: 280 DGRRXXXXXXXXXXXXSTVSTSSANAGVIDEYLEKSKANKELNDKKRLATSGANFARAYT 459
            GRR            +  S SSANAGVID+YLEKSKANKELNDKKRLATSGANFARAYT
Sbjct: 58  AGRRIALLGLAAALFTAASSNSSANAGVIDDYLEKSKANKELNDKKRLATSGANFARAYT 117

Query: 460 VQFGTCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDKFKCGSNVFWKW 612
           VQFGTCKFPENFTGCQDLAKQKKVPFIS+DLALECEGKDK+KCGSNVFWKW
Sbjct: 118 VQFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKYKCGSNVFWKW 168


>ref|XP_003602547.1| Photosystem I reaction center subunit N [Medicago truncatula]
           gi|355491595|gb|AES72798.1| Photosystem I reaction
           center subunit N [Medicago truncatula]
           gi|388492560|gb|AFK34346.1| unknown [Medicago
           truncatula]
          Length = 172

 Score =  234 bits (597), Expect = 1e-59
 Identities = 126/173 (72%), Positives = 137/173 (79%), Gaps = 6/173 (3%)
 Frame = +1

Query: 112 MAAVNSSVLACNYAITGASDLSFKHASTASVALP--VGTKLPMIKAQQARVSEGKGS--D 279
           MAA+NSSVLAC+YAI+G S+L+ K  S  S A P   G KLP+IKAQQ R+ E K S   
Sbjct: 1   MAAMNSSVLACSYAISG-SELNAKLISVPSAASPGVSGIKLPLIKAQQVRIPEAKESRAS 59

Query: 280 DGRRXXXXXXXXXXXXSTVSTS--SANAGVIDEYLEKSKANKELNDKKRLATSGANFARA 453
           DGRR            + VS S  SANAGVI+EYLEKSKANKELNDKKRLATSGANFARA
Sbjct: 60  DGRRNALALLAATLFTTAVSASNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARA 119

Query: 454 YTVQFGTCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDKFKCGSNVFWKW 612
           YTVQFGTCKFPENFTGCQDLAKQKKVPFI+EDL LECEGKDK+KCGSNVFWKW
Sbjct: 120 YTVQFGTCKFPENFTGCQDLAKQKKVPFITEDLELECEGKDKYKCGSNVFWKW 172


>ref|XP_002309915.1| predicted protein [Populus trichocarpa] gi|222852818|gb|EEE90365.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score =  232 bits (592), Expect = 5e-59
 Identities = 123/172 (71%), Positives = 137/172 (79%), Gaps = 5/172 (2%)
 Frame = +1

Query: 112 MAAVNSSVLACNYAI--TGASDLSFKHASTASVALPV--GTKLPMIKAQQARV-SEGKGS 276
           MAA+NSSVLACNYAI  TG+S+L+ K  S  +VA  V  G KLP+I+AQQ R  S    +
Sbjct: 1   MAAMNSSVLACNYAISGTGSSELNAKIVSMPAVASLVVSGPKLPVIRAQQTRADSREMKA 60

Query: 277 DDGRRXXXXXXXXXXXXSTVSTSSANAGVIDEYLEKSKANKELNDKKRLATSGANFARAY 456
            +GRR            S  + SSANAGVI+EYLEKSKANKELNDKKRLATSGANFARA+
Sbjct: 61  SEGRRAAMVYLAATLFTSAAAASSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAF 120

Query: 457 TVQFGTCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDKFKCGSNVFWKW 612
           TVQFGTCKFPENFTGCQDLAKQKKVPFIS+DLALECEGKDK+KCGSNVFWKW
Sbjct: 121 TVQFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKYKCGSNVFWKW 172