BLASTX nr result

ID: Coptis24_contig00016033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016033
         (863 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510065.1| conserved hypothetical protein [Ricinus comm...   248   2e-63
ref|XP_002285423.2| PREDICTED: uncharacterized protein LOC100250...   241   1e-61
ref|XP_002320678.1| predicted protein [Populus trichocarpa] gi|2...   240   3e-61
ref|XP_003539253.1| PREDICTED: protein PHLOEM PROTEIN 2-LIKE A10...   229   5e-58
ref|XP_002302396.1| predicted protein [Populus trichocarpa] gi|2...   229   8e-58

>ref|XP_002510065.1| conserved hypothetical protein [Ricinus communis]
           gi|223550766|gb|EEF52252.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 409

 Score =  248 bits (632), Expect = 2e-63
 Identities = 131/262 (50%), Positives = 173/262 (66%), Gaps = 12/262 (4%)
 Frame = -3

Query: 750 MDLEFISKGLDYSKRRKKWILLLAAFGITGYSVYKLHNLPCVVKKRKKLMKLIGTVISLI 571
           MD   + +G+  S RR++WILLLAA G++GY  YK++NLP +VKKRK+ MKL G +IS+ 
Sbjct: 1   MDFNLVKRGVYLSPRRRRWILLLAALGVSGYGAYKVYNLPSIVKKRKRYMKLFGALISVA 60

Query: 570 QVVSDSTETIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARSEEFSESVVRVTQ 391
           ++VSDS +TI                                   A+S+EFSES+ RV+Q
Sbjct: 61  ELVSDSADTIGIVSRDLKQFLLSDSDQIPNSFKQISKI-------AKSDEFSESLTRVSQ 113

Query: 390 ALTLGVLRGYKLDAKSDG------GEETGDRVLDKLFSTAGTGFASVVVGSFARNLVMAF 229
           ALT+G+LRGYK+++ +             D+V+D++FS AGTGFASVVVGSFARNLV+ F
Sbjct: 114 ALTVGILRGYKVESNNHQLASGLKNSSITDKVMDRVFSKAGTGFASVVVGSFARNLVLGF 173

Query: 228 YSGDG------NQSSSEEQKWVSVICNDKCKELIADSIQLFVTTAVAVYLDKTMDVNTYD 67
           YS  G        + S+  KWV V+C+D+CKELI D IQ FV+TAVAVYLDKTM +NTYD
Sbjct: 174 YSNVGAGVDQSRSNLSDLPKWVGVVCDDRCKELIGDCIQKFVSTAVAVYLDKTMQINTYD 233

Query: 66  DIFSGLANPKHGTKVRDILVSV 1
           ++FSGL NP+H + VRDILVSV
Sbjct: 234 ELFSGLTNPRHQSNVRDILVSV 255


>ref|XP_002285423.2| PREDICTED: uncharacterized protein LOC100250545 [Vitis vinifera]
          Length = 842

 Score =  241 bits (616), Expect = 1e-61
 Identities = 128/273 (46%), Positives = 174/273 (63%), Gaps = 23/273 (8%)
 Frame = -3

Query: 750  MDLEFISKGLDYSKRRKKWILLLAAFGITGYSVYKLHNLPCVVKKRKKLMKLIGTVISLI 571
            MDLE + K LD ++RRKK ++LLA FG++ +  YK+++ P VV+KR++L KL+G +IS+ 
Sbjct: 425  MDLELVKKALDLARRRKKLVVLLAVFGVSSFGAYKVYHWPYVVRKRQRLFKLLGALISIA 484

Query: 570  QVVSDSTETIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARSEEFSESVVRVTQ 391
            ++ SDS ET+                                    +SEEFS S++ V +
Sbjct: 485  EMASDSAETVGVVSKDLKEFLQSDTDQIPNSLKQISKI-------VKSEEFSGSMIGVME 537

Query: 390  ALTLGVLRGYKLDAKSDGGEET-------GDRVLDKLFSTAGTGFASVVVGSFARNLVMA 232
            ALT+G+LRGY+LDA+ +   +T        D ++++LFS+AGTGFASVVVGSFARNLVM 
Sbjct: 538  ALTVGILRGYRLDARIENDAQTRSGDSSFSDSIMERLFSSAGTGFASVVVGSFARNLVMG 597

Query: 231  FYSGDGNQSSSEEQ----------------KWVSVICNDKCKELIADSIQLFVTTAVAVY 100
            FY+   +   S E                 KWV+V+C DKCK LIAD IQ+FV+TAVAVY
Sbjct: 598  FYARGASHDGSNENNRNAAALDGAEVSTAPKWVNVVCGDKCKPLIADCIQMFVSTAVAVY 657

Query: 99   LDKTMDVNTYDDIFSGLANPKHGTKVRDILVSV 1
            LDKTMD+NTYD++F+GL NPKH  KVRDILVS+
Sbjct: 658  LDKTMDINTYDELFAGLTNPKHQIKVRDILVSL 690


>ref|XP_002320678.1| predicted protein [Populus trichocarpa] gi|222861451|gb|EEE98993.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score =  240 bits (612), Expect = 3e-61
 Identities = 124/260 (47%), Positives = 173/260 (66%), Gaps = 10/260 (3%)
 Frame = -3

Query: 750 MDLEFISKGLDYSKRRKKWILLLAAFGITGYSVYKLHNLPCVVKKRKKLMKLIGTVISLI 571
           MDLE +  G+ +S+R+KK ++LLA FG++GY  Y+L+NLP V +KR+  MKL+G +IS+ 
Sbjct: 1   MDLELVKSGVHFSRRKKKLLILLAVFGVSGYGFYRLYNLPAVARKRRGFMKLMGALISIA 60

Query: 570 QVVSDSTETIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARSEEFSESVVRVTQ 391
           ++VSDSTETI                                   A+S+EFSES++RVTQ
Sbjct: 61  EMVSDSTETISIVSKDLKEFLQSDSDKIPNSLKQISKI-------AKSDEFSESLMRVTQ 113

Query: 390 ALTLGVLRGYKLDAKS-------DGGEETGDRVLDKLFSTAGTGFASVVVGSFARNLVMA 232
           ALT+GVLRGY L++ +        G     D+V+++LFS  G GF SVVVGSFARNLV+ 
Sbjct: 114 ALTVGVLRGYNLESGNGNTVGLGSGNLNFSDKVMERLFSNEGAGFVSVVVGSFARNLVLG 173

Query: 231 FYSGDGNQ---SSSEEQKWVSVICNDKCKELIADSIQLFVTTAVAVYLDKTMDVNTYDDI 61
           FYS  G Q   S S+   WV V+C+D+C+ELIAD IQ FV++AV+VYLDKT+ +N+YD++
Sbjct: 174 FYSSGGGQMGSSLSDVPGWVGVVCDDRCRELIADCIQKFVSSAVSVYLDKTLKINSYDEL 233

Query: 60  FSGLANPKHGTKVRDILVSV 1
           F+GL NPKH   V+D+L+S+
Sbjct: 234 FTGLTNPKHQNNVKDVLISL 253


>ref|XP_003539253.1| PREDICTED: protein PHLOEM PROTEIN 2-LIKE A10-like [Glycine max]
          Length = 411

 Score =  229 bits (585), Expect = 5e-58
 Identities = 126/265 (47%), Positives = 169/265 (63%), Gaps = 15/265 (5%)
 Frame = -3

Query: 750 MDLEFISKGLDYSKRRKKWILLLAAFGITGYSVYKLHNLPCVVKKRKKLMKLIGTVISLI 571
           M++  + +G DY +R+KKWIL+L A G+ G+S YKL++ P V +KRK+L KL+   +S+ 
Sbjct: 1   MEVLLVDQGFDYVRRKKKWILILCAVGLGGFSAYKLYHAPSVARKRKRLSKLLSAFVSVA 60

Query: 570 QVVSDSTETIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARSEEFSESVVRVTQ 391
           + +S+S +TI                                   ARSE  SES+V VT+
Sbjct: 61  ESLSESADTIGIVSRDVKVFLESDSDQIPNSLKQISKI-------ARSEHLSESLVSVTR 113

Query: 390 ALTLGVLRGYKLDAKSDGGEETG----DRVLDKLFSTAGTGFASVVVGSFARNLVMAFYS 223
           A+T+GVLRGY+      GG++TG    DRVLDK+ + AG+GFASVV+GSFARNLV+AFYS
Sbjct: 114 AVTVGVLRGYE-SMNRTGGDQTGSSVVDRVLDKMLTPAGSGFASVVLGSFARNLVLAFYS 172

Query: 222 --------GDGNQSSSEEQK---WVSVICNDKCKELIADSIQLFVTTAVAVYLDKTMDVN 76
                   G+ N  +S  +    WV V+C D+C ELI + +QLFV+TAVAVYLDKTM +N
Sbjct: 173 DQQHNHSGGESNSINSNSETVLAWVDVVCGDRCGELIGNCVQLFVSTAVAVYLDKTMHIN 232

Query: 75  TYDDIFSGLANPKHGTKVRDILVSV 1
           TYDD F+GL NPKH T VRD+LVSV
Sbjct: 233 TYDDFFAGLTNPKHETNVRDMLVSV 257


>ref|XP_002302396.1| predicted protein [Populus trichocarpa] gi|222844122|gb|EEE81669.1|
           predicted protein [Populus trichocarpa]
          Length = 362

 Score =  229 bits (583), Expect = 8e-58
 Identities = 120/247 (48%), Positives = 163/247 (65%), Gaps = 10/247 (4%)
 Frame = -3

Query: 711 KRRKKWILLLAAFGITGYSVYKLHNLPCVVKKRKKLMKLIGTVISLIQVVSDSTETIXXX 532
           +R+KK ++ LA  G++GY VYK++NLP VV+KR++ M+L+G +IS+ ++VSDS ETI   
Sbjct: 1   RRKKKLLIFLAVSGVSGYGVYKVYNLPAVVRKRRRFMRLMGALISIAEMVSDSAETISIV 60

Query: 531 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARSEEFSESVVRVTQALTLGVLRGYKLD 352
                                           A+S+EFSES++ VTQALTLGVLRGY L+
Sbjct: 61  SKDLKEFLQSDADKIPNSLKQISKI-------AKSDEFSESLIGVTQALTLGVLRGYNLE 113

Query: 351 AKSD-------GGEETGDRVLDKLFSTAGTGFASVVVGSFARNLVMAFYSGDGNQSSS-- 199
           + +D       G     D V+++LFS+ GTGF SVVVGSFARNLV+  YS   +QS S  
Sbjct: 114 SGNDKKLGLGYGNSSFSDEVMERLFSSKGTGFVSVVVGSFARNLVLGLYSSGEDQSRSSL 173

Query: 198 -EEQKWVSVICNDKCKELIADSIQLFVTTAVAVYLDKTMDVNTYDDIFSGLANPKHGTKV 22
            +   W+ V+C+D+C+ELIAD IQ FV+TAVAVYLDKT+ +NTYD+ F+GL NPKH   V
Sbjct: 174 SDVPGWIGVVCDDRCRELIADCIQKFVSTAVAVYLDKTLQINTYDEFFTGLTNPKHQNNV 233

Query: 21  RDILVSV 1
           RD+LVS+
Sbjct: 234 RDVLVSI 240


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