BLASTX nr result

ID: Coptis24_contig00016026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016026
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328541.1| predicted protein [Populus trichocarpa] gi|2...   251   3e-65
ref|XP_002284915.2| PREDICTED: branched-chain-amino-acid aminotr...   250   7e-65
emb|CBI36739.3| unnamed protein product [Vitis vinifera]              250   7e-65
ref|XP_003520818.1| PREDICTED: LOW QUALITY PROTEIN: amino acid a...   250   1e-64
ref|XP_002512341.1| branched-chain amino acid aminotransferase, ...   248   4e-64

>ref|XP_002328541.1| predicted protein [Populus trichocarpa] gi|222838256|gb|EEE76621.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score =  251 bits (642), Expect = 3e-65
 Identities = 127/158 (80%), Positives = 135/158 (85%)
 Frame = -3

Query: 514 TATTRRNSPNNLDSKXXXXXXXXXXLAKVEGNLAKADDAIMLDKDGYVSETNATNIFLVK 335
           TATTRRNSPNNLDSK          LAK+EGN A ADDAIMLDKDG+VSETNATNIFLVK
Sbjct: 402 TATTRRNSPNNLDSKIHHNNLLNNILAKIEGNNANADDAIMLDKDGFVSETNATNIFLVK 461

Query: 334 KGHVVTPHADYCLPGITRATVMDLVVKEDLVLQERRISLSEFHTADEVWTTGTMGELTPV 155
           KG V+TPHADYCLPGITRATVMDLVVKE LVL+ERRISLSEFHTADEVWTTGTMGELTP 
Sbjct: 462 KGRVLTPHADYCLPGITRATVMDLVVKEGLVLEERRISLSEFHTADEVWTTGTMGELTPA 521

Query: 154 VKIDGRVIGDGKVGPVTRQVQNAYKNLTAELGESIPMY 41
           VKIDGR +GDG+VGPVTR++Q AYK LT E G  IP Y
Sbjct: 522 VKIDGREVGDGQVGPVTRRLQKAYKKLTEESGVPIPSY 559


>ref|XP_002284915.2| PREDICTED: branched-chain-amino-acid aminotransferase-like protein 2
            [Vitis vinifera]
          Length = 960

 Score =  250 bits (639), Expect = 7e-65
 Identities = 127/156 (81%), Positives = 133/156 (85%)
 Frame = -3

Query: 514  TATTRRNSPNNLDSKXXXXXXXXXXLAKVEGNLAKADDAIMLDKDGYVSETNATNIFLVK 335
            TATTRRNSPNNLDSK          LAK+EGN A ADDAIMLDKDGYVSETNATNIFLVK
Sbjct: 800  TATTRRNSPNNLDSKIHHNNLLNNILAKIEGNNANADDAIMLDKDGYVSETNATNIFLVK 859

Query: 334  KGHVVTPHADYCLPGITRATVMDLVVKEDLVLQERRISLSEFHTADEVWTTGTMGELTPV 155
            KGHV+TPHADYCLPGITRATVMDLVVKE   L ERRISLSEFHTADEVWTTGTMGEL+PV
Sbjct: 860  KGHVLTPHADYCLPGITRATVMDLVVKEKFPLVERRISLSEFHTADEVWTTGTMGELSPV 919

Query: 154  VKIDGRVIGDGKVGPVTRQVQNAYKNLTAELGESIP 47
            VKIDGR +GDG+VGPVTR +QNAYK LT E G  IP
Sbjct: 920  VKIDGRPVGDGQVGPVTRHLQNAYKKLTEESGVPIP 955


>emb|CBI36739.3| unnamed protein product [Vitis vinifera]
          Length = 975

 Score =  250 bits (639), Expect = 7e-65
 Identities = 127/156 (81%), Positives = 133/156 (85%)
 Frame = -3

Query: 514  TATTRRNSPNNLDSKXXXXXXXXXXLAKVEGNLAKADDAIMLDKDGYVSETNATNIFLVK 335
            TATTRRNSPNNLDSK          LAK+EGN A ADDAIMLDKDGYVSETNATNIFLVK
Sbjct: 815  TATTRRNSPNNLDSKIHHNNLLNNILAKIEGNNANADDAIMLDKDGYVSETNATNIFLVK 874

Query: 334  KGHVVTPHADYCLPGITRATVMDLVVKEDLVLQERRISLSEFHTADEVWTTGTMGELTPV 155
            KGHV+TPHADYCLPGITRATVMDLVVKE   L ERRISLSEFHTADEVWTTGTMGEL+PV
Sbjct: 875  KGHVLTPHADYCLPGITRATVMDLVVKEKFPLVERRISLSEFHTADEVWTTGTMGELSPV 934

Query: 154  VKIDGRVIGDGKVGPVTRQVQNAYKNLTAELGESIP 47
            VKIDGR +GDG+VGPVTR +QNAYK LT E G  IP
Sbjct: 935  VKIDGRPVGDGQVGPVTRHLQNAYKKLTEESGVPIP 970


>ref|XP_003520818.1| PREDICTED: LOW QUALITY PROTEIN: amino acid aminotransferase [Glycine
            max]
          Length = 906

 Score =  250 bits (638), Expect = 1e-64
 Identities = 124/161 (77%), Positives = 139/161 (86%)
 Frame = -3

Query: 514  TATTRRNSPNNLDSKXXXXXXXXXXLAKVEGNLAKADDAIMLDKDGYVSETNATNIFLVK 335
            TATTRRNSPNNLDSK          LAK+EGN AKADDAIMLD+DGY+SETNATNIF+VK
Sbjct: 746  TATTRRNSPNNLDSKIHHNNLLNNILAKIEGNNAKADDAIMLDQDGYLSETNATNIFVVK 805

Query: 334  KGHVVTPHADYCLPGITRATVMDLVVKEDLVLQERRISLSEFHTADEVWTTGTMGELTPV 155
            KG V+TPHADYCLPGITRATVMDLVVKE L+L+ERRISLSE HTADEVWTTGTMGEL+PV
Sbjct: 806  KGRVLTPHADYCLPGITRATVMDLVVKEQLILEERRISLSEVHTADEVWTTGTMGELSPV 865

Query: 154  VKIDGRVIGDGKVGPVTRQVQNAYKNLTAELGESIPMYCKT 32
            VK+DGR+IG+G+VGPVTR++Q AYK LT + G  IP Y KT
Sbjct: 866  VKVDGRIIGNGEVGPVTRRLQAAYKKLTEQSGVPIPTYLKT 906


>ref|XP_002512341.1| branched-chain amino acid aminotransferase, putative [Ricinus
           communis] gi|223548302|gb|EEF49793.1| branched-chain
           amino acid aminotransferase, putative [Ricinus communis]
          Length = 378

 Score =  248 bits (633), Expect = 4e-64
 Identities = 124/158 (78%), Positives = 135/158 (85%)
 Frame = -3

Query: 514 TATTRRNSPNNLDSKXXXXXXXXXXLAKVEGNLAKADDAIMLDKDGYVSETNATNIFLVK 335
           TATTRRNSPNNLDSK          LAK+EGN A ADDAIMLDKDGYVSETNATNIFLVK
Sbjct: 218 TATTRRNSPNNLDSKIHHNNLLNNILAKIEGNNANADDAIMLDKDGYVSETNATNIFLVK 277

Query: 334 KGHVVTPHADYCLPGITRATVMDLVVKEDLVLQERRISLSEFHTADEVWTTGTMGELTPV 155
           KG V TPHADYCLPGITRATVMDLV+KE+LVL+ER+ISLSEFHTADE WTTGTMGEL+PV
Sbjct: 278 KGRVSTPHADYCLPGITRATVMDLVIKENLVLEERKISLSEFHTADEAWTTGTMGELSPV 337

Query: 154 VKIDGRVIGDGKVGPVTRQVQNAYKNLTAELGESIPMY 41
           VKIDGR +G+GKVGPVT+++QNAYK LT   G  IP Y
Sbjct: 338 VKIDGREVGNGKVGPVTQRLQNAYKKLTEHSGVPIPSY 375


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