BLASTX nr result

ID: Coptis24_contig00016001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016001
         (1820 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera]    72   6e-10
ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256...    70   1e-09
emb|CAN76026.1| hypothetical protein VITISV_027817 [Vitis vinifera]    70   1e-09
emb|CAN68609.1| hypothetical protein VITISV_012924 [Vitis vinifera]    69   3e-09
emb|CAN77850.1| hypothetical protein VITISV_020834 [Vitis vinifera]    69   3e-09

>emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera]
          Length = 4128

 Score = 71.6 bits (174), Expect = 6e-10
 Identities = 32/77 (41%), Positives = 47/77 (61%)
 Frame = -2

Query: 238  RYSFGSGDKILFWEDTRLGDRPLKEAFNILFNMSKHKGRTISECMVRSDGDISWNLGFRR 59
            R+  G G K+ FW+D   G++ LKE F ILFN+S +K   ++E     +G  SW L F R
Sbjct: 3334 RFIIGDGTKVKFWKDLWCGNQSLKETFPILFNLSVNKEGWVAEAWEEDEGGXSWGLRFNR 3393

Query: 58   AFNDWVIDELASLMARL 8
              NDW + E+ SL+++L
Sbjct: 3394 HLNDWEVGEVESLLSKL 3410


>ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256388 [Vitis vinifera]
          Length = 2667

 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 32/77 (41%), Positives = 47/77 (61%)
 Frame = -2

Query: 238  RYSFGSGDKILFWEDTRLGDRPLKEAFNILFNMSKHKGRTISECMVRSDGDISWNLGFRR 59
            R+  G G K+ FW+D   G++ LKE F ILFN+S +K   ++E     +G  SW L F R
Sbjct: 933  RFIIGDGTKVKFWKDLWCGNQSLKETFPILFNLSVNKEGWVAEAWEEDEGGGSWGLRFNR 992

Query: 58   AFNDWVIDELASLMARL 8
              NDW + E+ SL+++L
Sbjct: 993  HLNDWEVGEVESLLSKL 1009


>emb|CAN76026.1| hypothetical protein VITISV_027817 [Vitis vinifera]
          Length = 1728

 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 32/77 (41%), Positives = 47/77 (61%)
 Frame = -2

Query: 238  RYSFGSGDKILFWEDTRLGDRPLKEAFNILFNMSKHKGRTISECMVRSDGDISWNLGFRR 59
            R+  G G K+ FW+D   G++ LKE F ILFN+S +K   ++E     +G  SW L F R
Sbjct: 1014 RFIIGDGTKVKFWKDLWCGNQSLKETFPILFNLSVNKEGWVAEAWEEDEGGGSWGLRFNR 1073

Query: 58   AFNDWVIDELASLMARL 8
              NDW + E+ SL+++L
Sbjct: 1074 HLNDWEVGEVESLLSKL 1090


>emb|CAN68609.1| hypothetical protein VITISV_012924 [Vitis vinifera]
          Length = 1930

 Score = 69.3 bits (168), Expect = 3e-09
 Identities = 31/77 (40%), Positives = 48/77 (62%)
 Frame = -2

Query: 238  RYSFGSGDKILFWEDTRLGDRPLKEAFNILFNMSKHKGRTISECMVRSDGDISWNLGFRR 59
            R+  G G ++ FW+D   G++ L+EAF ILFN+S +K   ++E     +G  SW L F R
Sbjct: 1816 RFIIGDGTRVKFWKDLWCGNQSLEEAFPILFNLSVNKEGWVAEAWEEDEGGGSWGLRFNR 1875

Query: 58   AFNDWVIDELASLMARL 8
              NDW + E+ SL+++L
Sbjct: 1876 HLNDWEVGEVESLLSKL 1892



 Score = 62.4 bits (150), Expect = 4e-07
 Identities = 32/78 (41%), Positives = 40/78 (51%)
 Frame = -2

Query: 241 IRYSFGSGDKILFWEDTRLGDRPLKEAFNILFNMSKHKGRTISECMVRSDGDISWNLGFR 62
           IR+  G G K+ FW D   GD  L   F  LF ++ HK  TI+E    S G   WNL F 
Sbjct: 740 IRFKVGKGTKVKFWTDHWCGDEALSRIFPQLFALAVHKNATINEVWDSSLGQGGWNLRFA 799

Query: 61  RAFNDWVIDELASLMARL 8
           R  NDW +D + +L   L
Sbjct: 800 RDSNDWELDLIGALFNML 817


>emb|CAN77850.1| hypothetical protein VITISV_020834 [Vitis vinifera]
          Length = 1905

 Score = 69.3 bits (168), Expect = 3e-09
 Identities = 31/77 (40%), Positives = 48/77 (62%)
 Frame = -2

Query: 238  RYSFGSGDKILFWEDTRLGDRPLKEAFNILFNMSKHKGRTISECMVRSDGDISWNLGFRR 59
            R+  G G ++ FW+D   G++ L+EAF ILFN+S +K   ++E     +G  SW L F R
Sbjct: 1622 RFIIGDGTRVKFWKDLWCGNQSLEEAFPILFNLSVNKEGWVAEAWEEDEGGGSWGLRFNR 1681

Query: 58   AFNDWVIDELASLMARL 8
              NDW + E+ SL+++L
Sbjct: 1682 HLNDWEVGEVESLLSKL 1698


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