BLASTX nr result

ID: Coptis24_contig00015924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015924
         (188 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001765435.1| predicted protein [Physcomitrella patens sub...   125   3e-27
ref|XP_003631587.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   125   5e-27
emb|CBI38032.3| unnamed protein product [Vitis vinifera]              125   5e-27
emb|CBI18352.3| unnamed protein product [Vitis vinifera]              124   6e-27
ref|XP_002270644.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   124   6e-27

>ref|XP_001765435.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162683285|gb|EDQ69696.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 535

 Score =  125 bits (315), Expect = 3e-27
 Identities = 57/60 (95%), Positives = 59/60 (98%)
 Frame = -2

Query: 187 QKQKEEAAEVYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSRIPRPMRSWAE 8
           QKQKEEAA +YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSRIPRPMR+WAE
Sbjct: 59  QKQKEEAANMYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSRIPRPMRNWAE 118


>ref|XP_003631587.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
           vinifera]
          Length = 712

 Score =  125 bits (313), Expect = 5e-27
 Identities = 55/62 (88%), Positives = 61/62 (98%)
 Frame = -2

Query: 187 QKQKEEAAEVYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSRIPRPMRSWAE 8
           Q+QKE+AAE+YDTFDMRVDRHW+EKKLEEMTERDWRIFREDFNISYKGS+IPRPMRSW E
Sbjct: 237 QRQKEQAAELYDTFDMRVDRHWTEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRSWVE 296

Query: 7   SR 2
           S+
Sbjct: 297 SK 298


>emb|CBI38032.3| unnamed protein product [Vitis vinifera]
          Length = 797

 Score =  125 bits (313), Expect = 5e-27
 Identities = 55/62 (88%), Positives = 61/62 (98%)
 Frame = -2

Query: 187 QKQKEEAAEVYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSRIPRPMRSWAE 8
           Q+QKE+AAE+YDTFDMRVDRHW+EKKLEEMTERDWRIFREDFNISYKGS+IPRPMRSW E
Sbjct: 251 QRQKEQAAELYDTFDMRVDRHWTEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRSWVE 310

Query: 7   SR 2
           S+
Sbjct: 311 SK 312


>emb|CBI18352.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  124 bits (312), Expect = 6e-27
 Identities = 54/62 (87%), Positives = 61/62 (98%)
 Frame = -2

Query: 187 QKQKEEAAEVYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSRIPRPMRSWAE 8
           Q+QKE+AAE+YDTFDMRVDRHW+EKKLEEMTERDWRIFREDFN+SYKGS+IPRPMRSW E
Sbjct: 155 QRQKEQAAELYDTFDMRVDRHWTEKKLEEMTERDWRIFREDFNVSYKGSKIPRPMRSWVE 214

Query: 7   SR 2
           S+
Sbjct: 215 SK 216


>ref|XP_002270644.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
           vinifera]
          Length = 709

 Score =  124 bits (312), Expect = 6e-27
 Identities = 54/62 (87%), Positives = 61/62 (98%)
 Frame = -2

Query: 187 QKQKEEAAEVYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSRIPRPMRSWAE 8
           Q+QKE+AAE+YDTFDMRVDRHW+EKKLEEMTERDWRIFREDFN+SYKGS+IPRPMRSW E
Sbjct: 234 QRQKEQAAELYDTFDMRVDRHWTEKKLEEMTERDWRIFREDFNVSYKGSKIPRPMRSWVE 293

Query: 7   SR 2
           S+
Sbjct: 294 SK 295


Top