BLASTX nr result

ID: Coptis24_contig00015918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015918
         (1253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520768.1| phenazine biosynthesis protein, putative [Ri...   366   8e-99
emb|CBI32361.3| unnamed protein product [Vitis vinifera]              362   8e-98
emb|CBI32362.3| unnamed protein product [Vitis vinifera]              362   1e-97
ref|XP_002276977.1| PREDICTED: uncharacterized isomerase BH0283-...   362   1e-97
ref|XP_002315091.1| predicted protein [Populus trichocarpa] gi|2...   360   3e-97

>ref|XP_002520768.1| phenazine biosynthesis protein, putative [Ricinus communis]
            gi|223540153|gb|EEF41730.1| phenazine biosynthesis
            protein, putative [Ricinus communis]
          Length = 489

 Score =  366 bits (939), Expect = 8e-99
 Identities = 178/288 (61%), Positives = 219/288 (76%), Gaps = 5/288 (1%)
 Frame = +2

Query: 260  VDAFTDTPFKGNPAAVCILEEERDDEWLQAVAKEFNVSQTCYLTRINTESVA-----EFS 424
            VDAFT++ FKGNPAAVC+LE+ERDD+WLQ+VA EFN+S+TCYLTRI+  S        F 
Sbjct: 200  VDAFTNSAFKGNPAAVCLLEDERDDKWLQSVAAEFNISETCYLTRISHHSDTVPSNPRFR 259

Query: 425  LRWFTPVAEVNLCGHATLAAAHVLFTSGLITTNIIEFSTLSGILTAKRVPRTGKSEPPSI 604
            LRWFTPVAEV LCGHATLAA+H +F++GL+ ++IIEF TLSGILTAK+V    K++  SI
Sbjct: 260  LRWFTPVAEVKLCGHATLAASHTIFSNGLVNSDIIEFDTLSGILTAKKVSEISKTDVSSI 319

Query: 605  SNGNAEDRFSIELDFPTVSVVECDPSEIPSIPLTLNGAQVVNIKKMATSDDLIVELSTGK 784
             NG A + F IEL+FPTV   E +  ++  I   LNGA +++I++  T+DDL V L + K
Sbjct: 320  QNGEANELFLIELNFPTVLSTEFNSVDLAPISKALNGASIIDIRRTTTADDLFVVLPSAK 379

Query: 785  SVSDLQPNFDEIHKCPGRGIIVTGIAPXXXXXXXXXXXXCPKLGINEDPVCGSAHCGLAP 964
            +VS+LQP FD+I KCPGRGIIV+G+AP            CPK GINEDPVCGSAHC LAP
Sbjct: 380  AVSELQPQFDDILKCPGRGIIVSGVAPPESGFDFYSRFFCPKYGINEDPVCGSAHCALAP 439

Query: 965  YWSKKLGKSDFMAYMASPRGGILELHFDEAIQRMLIRGEAVTVMEGSL 1108
            YW KKLGK DFMAY ASPR GIL++H DE  QR+L+RG+AVTVMEGSL
Sbjct: 440  YWGKKLGKCDFMAYQASPRSGILDIHLDEQNQRVLLRGKAVTVMEGSL 487


>emb|CBI32361.3| unnamed protein product [Vitis vinifera]
          Length = 303

 Score =  362 bits (930), Expect = 8e-98
 Identities = 181/300 (60%), Positives = 221/300 (73%), Gaps = 9/300 (3%)
 Frame = +2

Query: 230  MTKMAVKYTVVDAFTDTPFKGNPAAVCILEEERDDEWLQAVAKEFNVSQTCYLTRINTES 409
            M K  VKY+VVDAFTD+ FKGNPAAVC+LEEERD++WLQA+A EFNVSQT YLTRI    
Sbjct: 1    MAKKPVKYSVVDAFTDSAFKGNPAAVCLLEEERDEDWLQALAMEFNVSQTGYLTRITKPE 60

Query: 410  VAE---------FSLRWFTPVAEVNLCGHATLAAAHVLFTSGLITTNIIEFSTLSGILTA 562
              +         F LRWFTPVAEV LCGHATLAAAH+LFTS L+  N+IEF TLSG+LTA
Sbjct: 61   ALDSSTTILTPRFRLRWFTPVAEVKLCGHATLAAAHLLFTSSLMKGNMIEFITLSGVLTA 120

Query: 563  KRVPRTGKSEPPSISNGNAEDRFSIELDFPTVSVVECDPSEIPSIPLTLNGAQVVNIKKM 742
            ++V +   S+     NG A++ FS+ELDFP V +VE + +E+ SI   LNGA V++IKK 
Sbjct: 121  RKVMQGNNSDALKYENGEAQEHFSVELDFPIVPMVEYNSAEVASISKALNGASVIDIKK- 179

Query: 743  ATSDDLIVELSTGKSVSDLQPNFDEIHKCPGRGIIVTGIAPXXXXXXXXXXXXCPKLGIN 922
               DDL V L +GK+V D++P FD+I K PGRG+I+TG+AP            CPKLGI 
Sbjct: 180  TEKDDLFVVLPSGKTVVDIEPQFDDIQKLPGRGLIITGLAPPESEFDFFSRFFCPKLGIK 239

Query: 923  EDPVCGSAHCGLAPYWSKKLGKSDFMAYMASPRGGILELHFDEAIQRMLIRGEAVTVMEG 1102
            EDPVCGSAHC LAPYWS+KLGK D +AY ASPR GI+++H DE  QR+L+RG+AVTVMEG
Sbjct: 240  EDPVCGSAHCSLAPYWSQKLGKCDLLAYPASPRSGIVDIHLDEQNQRVLLRGKAVTVMEG 299


>emb|CBI32362.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score =  362 bits (928), Expect = 1e-97
 Identities = 178/300 (59%), Positives = 219/300 (73%), Gaps = 9/300 (3%)
 Frame = +2

Query: 230  MTKMAVKYTVVDAFTDTPFKGNPAAVCILEEERDDEWLQAVAKEFNVSQTCYLTRINTES 409
            M K  VK+TVVDAFTD+ FKGNPAAVC+LEEERD++WLQA+A EFN+S+TCYL RI    
Sbjct: 35   MAKKPVKFTVVDAFTDSAFKGNPAAVCLLEEERDEDWLQALAMEFNISETCYLNRITEPE 94

Query: 410  VAE---------FSLRWFTPVAEVNLCGHATLAAAHVLFTSGLITTNIIEFSTLSGILTA 562
              +         F LRWFTP  EVNLCGHATLAAAH LFTS L+  N+IEF TLSG+LTA
Sbjct: 95   ALDSSTTILTPRFRLRWFTPTTEVNLCGHATLAAAHFLFTSSLMKGNMIEFITLSGVLTA 154

Query: 563  KRVPRTGKSEPPSISNGNAEDRFSIELDFPTVSVVECDPSEIPSIPLTLNGAQVVNIKKM 742
            ++V +  KS+     NG A++ FS+ELDFP V +VE + +E+ SI   LNGA V++IKK 
Sbjct: 155  RKVMQGNKSDALKYENGEAQEHFSVELDFPIVPMVEYNSAEVASISKALNGASVIDIKK- 213

Query: 743  ATSDDLIVELSTGKSVSDLQPNFDEIHKCPGRGIIVTGIAPXXXXXXXXXXXXCPKLGIN 922
               DDL V L +GK+V D++P FD+I K PGRG+I+TG+AP            CPKLGI 
Sbjct: 214  TEGDDLFVVLPSGKTVVDIEPQFDDIQKLPGRGLIITGLAPPESEFDFFSRFFCPKLGIK 273

Query: 923  EDPVCGSAHCGLAPYWSKKLGKSDFMAYMASPRGGILELHFDEAIQRMLIRGEAVTVMEG 1102
            EDPVCGSAHC LAPYWS+KLGK D +AY ASPR G +++H DE  QR+L+RG+AVTVMEG
Sbjct: 274  EDPVCGSAHCSLAPYWSQKLGKCDLLAYAASPRSGRVDIHLDEQNQRVLLRGKAVTVMEG 333


>ref|XP_002276977.1| PREDICTED: uncharacterized isomerase BH0283-like [Vitis vinifera]
          Length = 303

 Score =  362 bits (928), Expect = 1e-97
 Identities = 178/300 (59%), Positives = 219/300 (73%), Gaps = 9/300 (3%)
 Frame = +2

Query: 230  MTKMAVKYTVVDAFTDTPFKGNPAAVCILEEERDDEWLQAVAKEFNVSQTCYLTRINTES 409
            M K  VK+TVVDAFTD+ FKGNPAAVC+LEEERD++WLQA+A EFN+S+TCYL RI    
Sbjct: 1    MAKKPVKFTVVDAFTDSAFKGNPAAVCLLEEERDEDWLQALAMEFNISETCYLNRITEPE 60

Query: 410  VAE---------FSLRWFTPVAEVNLCGHATLAAAHVLFTSGLITTNIIEFSTLSGILTA 562
              +         F LRWFTP  EVNLCGHATLAAAH LFTS L+  N+IEF TLSG+LTA
Sbjct: 61   ALDSSTTILTPRFRLRWFTPTTEVNLCGHATLAAAHFLFTSSLMKGNMIEFITLSGVLTA 120

Query: 563  KRVPRTGKSEPPSISNGNAEDRFSIELDFPTVSVVECDPSEIPSIPLTLNGAQVVNIKKM 742
            ++V +  KS+     NG A++ FS+ELDFP V +VE + +E+ SI   LNGA V++IKK 
Sbjct: 121  RKVMQGNKSDALKYENGEAQEHFSVELDFPIVPMVEYNSAEVASISKALNGASVIDIKK- 179

Query: 743  ATSDDLIVELSTGKSVSDLQPNFDEIHKCPGRGIIVTGIAPXXXXXXXXXXXXCPKLGIN 922
               DDL V L +GK+V D++P FD+I K PGRG+I+TG+AP            CPKLGI 
Sbjct: 180  TEGDDLFVVLPSGKTVVDIEPQFDDIQKLPGRGLIITGLAPPESEFDFFSRFFCPKLGIK 239

Query: 923  EDPVCGSAHCGLAPYWSKKLGKSDFMAYMASPRGGILELHFDEAIQRMLIRGEAVTVMEG 1102
            EDPVCGSAHC LAPYWS+KLGK D +AY ASPR G +++H DE  QR+L+RG+AVTVMEG
Sbjct: 240  EDPVCGSAHCSLAPYWSQKLGKCDLLAYAASPRSGRVDIHLDEQNQRVLLRGKAVTVMEG 299


>ref|XP_002315091.1| predicted protein [Populus trichocarpa] gi|222864131|gb|EEF01262.1|
            predicted protein [Populus trichocarpa]
          Length = 295

 Score =  360 bits (925), Expect = 3e-97
 Identities = 185/297 (62%), Positives = 223/297 (75%), Gaps = 4/297 (1%)
 Frame = +2

Query: 230  MTKMAVKYTVVDAFTDTPFKGNPAAVCILEEERDDEWLQAVAKEFNVSQTCYLTRINTE- 406
            M K  VKY VVDAFTD+ FKGNPAAVC+LE E+D++WLQAVA EFN+SQT YLT I T+ 
Sbjct: 1    MGKKFVKYFVVDAFTDSAFKGNPAAVCLLEYEKDEKWLQAVAAEFNISQTGYLTPITTDV 60

Query: 407  ---SVAEFSLRWFTPVAEVNLCGHATLAAAHVLFTSGLITTNIIEFSTLSGILTAKRVPR 577
               S   F LRWFTPVAEVNLCGHATLAA+H LF++GL++++IIEF TLSGILTAK+VP+
Sbjct: 61   AVTSNPRFRLRWFTPVAEVNLCGHATLAASHTLFSNGLVSSDIIEFDTLSGILTAKKVPQ 120

Query: 578  TGKSEPPSISNGNAEDRFSIELDFPTVSVVECDPSEIPSIPLTLNGAQVVNIKKMATSDD 757
            +    P S+SNG A++ F IELDFP V   E     + SI   LN A ++++KK  T  D
Sbjct: 121  S--INPESVSNGEAKESFLIELDFPVVPTTEFFIDAV-SISKALNSAPIIDLKK-TTFGD 176

Query: 758  LIVELSTGKSVSDLQPNFDEIHKCPGRGIIVTGIAPXXXXXXXXXXXXCPKLGINEDPVC 937
            L V L +GK V+++ P F EI KCPGRG+IV+G+AP            CPKLGINEDPVC
Sbjct: 177  LFVVLPSGKDVAEINPEFGEILKCPGRGVIVSGVAPPESGFDFYSRFFCPKLGINEDPVC 236

Query: 938  GSAHCGLAPYWSKKLGKSDFMAYMASPRGGILELHFDEAIQRMLIRGEAVTVMEGSL 1108
            GSAHC LAPYWSKKLGK DFMAY ASPR GIL++H DE  QR+L+RG+AVTVMEGS+
Sbjct: 237  GSAHCALAPYWSKKLGKCDFMAYQASPRSGILDIHLDEQNQRVLLRGKAVTVMEGSV 293


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