BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015817
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana]               64   2e-08
gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...    62   5e-08
gb|AAO00713.1| retrotransposon protein, putative, unclassified [...    59   3e-07
gb|AAP54692.2| retrotransposon protein, putative, unclassified [...    59   3e-07
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    55   5e-06

>gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana]
          Length = 238

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
 Frame = +3

Query: 24  NCREIGTTTAIQQIKDLMGRFNVDIVCLSETKASQEGIGRLSKKLKLSGYFAVPALGLSG 203
           NC+ +G    ++++K++  ++  D++CLSETK   + +     +L  S +  VP++GLSG
Sbjct: 60  NCQGLGIDLTVRRLKEINRKYLPDVICLSETKQRNDYVRDTCCELGFSNFVMVPSMGLSG 119

Query: 204 GLAVLWKEGVDLEILGASRN----QVTGTQVGLEL 296
           GL VLWK  V + +   S N     V   +VG  L
Sbjct: 120 GLVVLWKPSVHISVSFNSPNLVDCYVQSNEVGFNL 154


>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 1936

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/89 (33%), Positives = 51/89 (57%)
 Frame = +3

Query: 3   SMTIHA*NCREIGTTTAIQQIKDLMGRFNVDIVCLSETKASQEGIGRLSKKLKLSGYFAV 182
           +M+  A NCR +G T  +Q ++ L+ +    +V L ET+ S E + RL +KL   G+  V
Sbjct: 635 AMSCLAWNCRGLGNTATVQDLRALIQKAGSQLVFLCETRQSVEKMSRLRRKLAFRGFVGV 694

Query: 183 PALGLSGGLAVLWKEGVDLEILGASRNQV 269
            + G SGGLA+ W E V +++   ++  +
Sbjct: 695 SSEGKSGGLALYWDESVSVDVKDINKRYI 723


>gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1557

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/75 (41%), Positives = 44/75 (58%)
 Frame = +3

Query: 24  NCREIGTTTAIQQIKDLMGRFNVDIVCLSETKASQEGIGRLSKKLKLSGYFAVPALGLSG 203
           NCR IG  T +Q++  L+   +   V L ET+   + I RL  +L L G+  V + G+SG
Sbjct: 440 NCRGIGNATTVQELCALVKEASSQFVFLCETRQPVDKIKRLRNRLGLRGFAGVSSDGMSG 499

Query: 204 GLAVLWKEGVDLEIL 248
           GLA+ W E V +EIL
Sbjct: 500 GLALFWHESVHVEIL 514


>gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1585

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/75 (41%), Positives = 44/75 (58%)
 Frame = +3

Query: 24  NCREIGTTTAIQQIKDLMGRFNVDIVCLSETKASQEGIGRLSKKLKLSGYFAVPALGLSG 203
           NCR IG  T +Q++  L+   +   V L ET+   + I RL  +L L G+  V + G+SG
Sbjct: 468 NCRGIGNATTVQELCALVKEASSQFVFLCETRQPVDKIKRLRNRLGLRGFAGVSSDGMSG 527

Query: 204 GLAVLWKEGVDLEIL 248
           GLA+ W E V +EIL
Sbjct: 528 GLALFWHESVHVEIL 542


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/90 (31%), Positives = 49/90 (54%)
 Frame = +3

Query: 6   MTIHA*NCREIGTTTAIQQIKDLMGRFNVDIVCLSETKASQEGIGRLSKKLKLSGYFAVP 185
           M I   NCR +G   +++Q++    +F  DI+ +SET  ++  +  L   L  S  F V 
Sbjct: 1   MNILCWNCRGLGNPWSVRQLRSWSNQFAPDIIFVSETMINKIEVEALKSWLGFSNAFGVA 60

Query: 186 ALGLSGGLAVLWKEGVDLEILGASRNQVTG 275
           ++G +GGL + WKE V   ++  S++ + G
Sbjct: 61  SVGRAGGLCLYWKEEVMFSLVSFSQHHICG 90