BLASTX nr result

ID: Coptis24_contig00015773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015773
         (1656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262981.1| PREDICTED: short-chain dehydrogenase TIC 32,...   417   e-114
ref|XP_002299444.1| predicted protein [Populus trichocarpa] gi|2...   413   e-113
ref|XP_002518876.1| short-chain dehydrogenase, putative [Ricinus...   413   e-113
ref|XP_003530511.1| PREDICTED: WW domain-containing oxidoreducta...   412   e-112
ref|XP_002303676.1| predicted protein [Populus trichocarpa] gi|2...   396   e-108

>ref|XP_002262981.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Vitis
            vinifera] gi|297742402|emb|CBI34551.3| unnamed protein
            product [Vitis vinifera]
          Length = 336

 Score =  417 bits (1072), Expect = e-114
 Identities = 217/323 (67%), Positives = 250/323 (77%)
 Frame = +3

Query: 471  MLETVKYLIGSVGPSGFSSKSTAEQVTEVFPDLPXXXXXXXXXXXXXXXXXXRVLAKRGA 650
            ML+ +KYL+GS G SG+ SKSTAE+VTE  PDL                   RVLAKRGA
Sbjct: 1    MLDALKYLLGSFGASGYGSKSTAEEVTENCPDLGSVTAVITGATSGIGAETARVLAKRGA 60

Query: 651  RLVLPARTVXXXXXXXXXXXXXFPDTEIIVMTLDLSSLTSVRNFVTDFESXXXXXXXXXX 830
            RLVLPAR++             FP++EI+VM LDLSSL SVR FV++FES          
Sbjct: 61   RLVLPARSLKAAEEAKARIVAEFPNSEIVVMALDLSSLDSVRCFVSEFESLDLPLNLLIN 120

Query: 831  XAGKFSHEYGISEDGIEMTFATNYLGHFLLTKMLLKMMIETAQRTGYQGRIVNVSSAIHN 1010
             AGKF+HE+ ISEDGIEMTFATNYLGHFLLTK+LL  MIETA++TG QGRIVNVSS IH+
Sbjct: 121  NAGKFTHEHAISEDGIEMTFATNYLGHFLLTKLLLNKMIETAKKTGVQGRIVNVSSTIHS 180

Query: 1011 WFSGDGLRYLEQINRKKSFYDPTRAYALSKLANVLHTKELARRLKKMEANVTVNCVHPGV 1190
            WFSGD +RYL  I R KS YD TRAYA+SKLANVLHTKELA+RLK+M+ANVTVNCVHPG+
Sbjct: 181  WFSGDVIRYLGLITRNKSQYDATRAYAVSKLANVLHTKELAQRLKQMDANVTVNCVHPGI 240

Query: 1191 VKTRLTREREGFLTDLIFFLTSMLLKTIPQAAATTCYVASHPQLLGVSGKYFADCNEASS 1370
            V+TRLTRE EG +TDLIFFLTS  LKTIPQAAATTCYVA+HP+L+ VSGKYFADCNEA +
Sbjct: 241  VRTRLTRETEGIVTDLIFFLTSKFLKTIPQAAATTCYVATHPRLVNVSGKYFADCNEAWT 300

Query: 1371 SQLGSNLKEASRLWIASEAMTAK 1439
            S+LGSN +EASRLW ASE MTA+
Sbjct: 301  SKLGSNSQEASRLWSASEIMTAR 323


>ref|XP_002299444.1| predicted protein [Populus trichocarpa] gi|222846702|gb|EEE84249.1|
            predicted protein [Populus trichocarpa]
          Length = 332

 Score =  413 bits (1062), Expect = e-113
 Identities = 218/324 (67%), Positives = 250/324 (77%), Gaps = 1/324 (0%)
 Frame = +3

Query: 471  MLETVKYLIGSVGPSGFSSKSTAEQVTEVFPDLPXXXXXXXXXXXXXXXXXXRVLAKRGA 650
            M E++KYL GS G SG+ SKST EQVTE   DL                   RVLAKRGA
Sbjct: 1    MFESLKYLTGSAGASGYGSKSTGEQVTENCGDLHSITAIITGATSGIGAETARVLAKRGA 60

Query: 651  RLVLPARTVXXXXXXXXXXXXXFPDTEIIVMTLDLSSLTSVRNFVTDFESXXXXXXXXXX 830
            RLVLPAR++              PDTEIIVM LDLSSL SVRNFV++FES          
Sbjct: 61   RLVLPARSLKAAEDAKARIISENPDTEIIVMGLDLSSLNSVRNFVSEFESFDLPLNLLIN 120

Query: 831  XAGKFSHEYGISEDGIEMTFATNYLGHFLLTKMLLKMMIETAQRTGYQGRIVNVSSAIHN 1010
             AGKF+HE+ ISEDGIEMTFATN+LGHFLLTK+LLK MIETA+ TG QGRIVNVSS+I+N
Sbjct: 121  NAGKFAHEHAISEDGIEMTFATNFLGHFLLTKLLLKKMIETAKTTGIQGRIVNVSSSIYN 180

Query: 1011 WFSGDGLRYLEQINRKK-SFYDPTRAYALSKLANVLHTKELARRLKKMEANVTVNCVHPG 1187
            WFSGD +RYL QI+R K   +DPTRAYALSKLANVLHTKELA+RLK+MEANVTVNCVHPG
Sbjct: 181  WFSGDPIRYLGQISRNKLRDFDPTRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPG 240

Query: 1188 VVKTRLTREREGFLTDLIFFLTSMLLKTIPQAAATTCYVASHPQLLGVSGKYFADCNEAS 1367
            VV+TRLTREREG +TD+ FFLTS LLKTIPQAAATTCYVA+HP+L+ V+GKYF+DCNEAS
Sbjct: 241  VVRTRLTREREGIVTDMAFFLTSKLLKTIPQAAATTCYVATHPRLVNVTGKYFSDCNEAS 300

Query: 1368 SSQLGSNLKEASRLWIASEAMTAK 1439
            +S+LGSN  EA+RLW ASE M ++
Sbjct: 301  TSKLGSNSTEAARLWTASEIMVSR 324


>ref|XP_002518876.1| short-chain dehydrogenase, putative [Ricinus communis]
            gi|223541863|gb|EEF43409.1| short-chain dehydrogenase,
            putative [Ricinus communis]
          Length = 339

 Score =  413 bits (1061), Expect = e-113
 Identities = 216/324 (66%), Positives = 251/324 (77%), Gaps = 1/324 (0%)
 Frame = +3

Query: 471  MLETVKYLIGSVGPSGFSSKSTAEQVTEVFPDLPXXXXXXXXXXXXXXXXXXRVLAKRGA 650
            MLETVKYLIGS GPS F SKSTAEQVTE F DL                   RVLAK+GA
Sbjct: 1    MLETVKYLIGSAGPSNFGSKSTAEQVTE-FSDLRSVTAIITGATSGIGAETARVLAKQGA 59

Query: 651  RLVLPARTVXXXXXXXXXXXXXF-PDTEIIVMTLDLSSLTSVRNFVTDFESXXXXXXXXX 827
            RLV+PAR++             F P++EII+M LDLSSL SV+NFV +FES         
Sbjct: 60   RLVIPARSMKAAEEAKARIMSDFKPESEIIIMALDLSSLNSVKNFVAEFESFNLPLNLLI 119

Query: 828  XXAGKFSHEYGISEDGIEMTFATNYLGHFLLTKMLLKMMIETAQRTGYQGRIVNVSSAIH 1007
              AG F+HE+ ISEDGIEMTFATNYLGHFLLTK+LLK MIETA+ TG QGRIVNVSS+IH
Sbjct: 120  NNAGTFAHEHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKETGVQGRIVNVSSSIH 179

Query: 1008 NWFSGDGLRYLEQINRKKSFYDPTRAYALSKLANVLHTKELARRLKKMEANVTVNCVHPG 1187
            +WFSGD +RYL +I+R K  YD TRAYALSKLAN+LHTKELA+RLK+MEANVTVNCVHPG
Sbjct: 180  SWFSGDMIRYLGEISRNKCHYDATRAYALSKLANILHTKELAQRLKQMEANVTVNCVHPG 239

Query: 1188 VVKTRLTREREGFLTDLIFFLTSMLLKTIPQAAATTCYVASHPQLLGVSGKYFADCNEAS 1367
            +V+TRLTREREG LTD++FF+ S LLKTIPQAAATTC+VA+ P+LL VSGKYFADCNEAS
Sbjct: 240  IVRTRLTREREGILTDMVFFMASKLLKTIPQAAATTCFVATSPRLLNVSGKYFADCNEAS 299

Query: 1368 SSQLGSNLKEASRLWIASEAMTAK 1439
            +S+LGS+  EAS+LW ASE M ++
Sbjct: 300  ASKLGSSSTEASKLWSASEIMVSR 323


>ref|XP_003530511.1| PREDICTED: WW domain-containing oxidoreductase-like isoform 1
            [Glycine max]
          Length = 337

 Score =  412 bits (1059), Expect = e-112
 Identities = 213/323 (65%), Positives = 242/323 (74%)
 Frame = +3

Query: 471  MLETVKYLIGSVGPSGFSSKSTAEQVTEVFPDLPXXXXXXXXXXXXXXXXXXRVLAKRGA 650
            MLETVKYL+GS GPSGF SK+TAEQVTE   DL                   RVLAKRGA
Sbjct: 1    MLETVKYLLGSAGPSGFGSKTTAEQVTENHADLRSITAIITGATSGIGTETARVLAKRGA 60

Query: 651  RLVLPARTVXXXXXXXXXXXXXFPDTEIIVMTLDLSSLTSVRNFVTDFESXXXXXXXXXX 830
            RLVLPAR++              PD+EIIVM LDLSSL SV NFV  F S          
Sbjct: 61   RLVLPARSMKAAEDAKARIVSECPDSEIIVMALDLSSLNSVTNFVAHFHSLGLPLHLLIN 120

Query: 831  XAGKFSHEYGISEDGIEMTFATNYLGHFLLTKMLLKMMIETAQRTGYQGRIVNVSSAIHN 1010
             AGKF+HE+ ISEDG+EMTFATNYLGHF++T +L+K M+ETA+ TG QGRIVNVSS+IH 
Sbjct: 121  NAGKFAHEHAISEDGVEMTFATNYLGHFVMTNLLVKKMVETAKETGVQGRIVNVSSSIHG 180

Query: 1011 WFSGDGLRYLEQINRKKSFYDPTRAYALSKLANVLHTKELARRLKKMEANVTVNCVHPGV 1190
            WFSGD + YL  I+R K  YD TRAYALSKLANV HTKELARRL++M ANVTVNCVHPG+
Sbjct: 181  WFSGDAISYLALISRNKRHYDATRAYALSKLANVFHTKELARRLQQMGANVTVNCVHPGI 240

Query: 1191 VKTRLTREREGFLTDLIFFLTSMLLKTIPQAAATTCYVASHPQLLGVSGKYFADCNEASS 1370
            V+TRLTREREG LTDL+FFL S LLKTIPQAAATTCYVA+HP+LL VSGKYFADCNE S+
Sbjct: 241  VRTRLTREREGLLTDLVFFLASKLLKTIPQAAATTCYVATHPRLLNVSGKYFADCNETST 300

Query: 1371 SQLGSNLKEASRLWIASEAMTAK 1439
            S+LGSN  EA+RLW ASE M ++
Sbjct: 301  SKLGSNSTEAARLWAASEFMISR 323


>ref|XP_002303676.1| predicted protein [Populus trichocarpa] gi|222841108|gb|EEE78655.1|
            predicted protein [Populus trichocarpa]
          Length = 322

 Score =  396 bits (1018), Expect = e-108
 Identities = 213/321 (66%), Positives = 242/321 (75%), Gaps = 1/321 (0%)
 Frame = +3

Query: 471  MLETVKYLIGSVGPSGFSSKSTAEQVTEVFPDLPXXXXXXXXXXXXXXXXXXRVLAKRGA 650
            M ET+KYL+GS G SG+ SKSTAEQVTE   DL                   RVLAKRGA
Sbjct: 1    MFETLKYLVGSAGASGYGSKSTAEQVTENCCDLHSITAIITGATSGIGAETARVLAKRGA 60

Query: 651  RLVLPARTVXXXXXXXXXXXXXFPDTEIIVMTLDLSSLTSVRNFVTDFESXXXXXXXXXX 830
            RLVLPAR +              PD +IIVM LDLSSL SVRNFV++FES          
Sbjct: 61   RLVLPARNLKGAEDAKARILSENPDADIIVMGLDLSSLNSVRNFVSEFESLNLPLNLLIN 120

Query: 831  XAGKFSHEYGISEDGIEMTFATNYLGHFLLTKMLLKMMIETAQRTGYQGRIVNVSSAIHN 1010
             AG+F+ E  ISEDGIEMTFATNYLGHFLLTK+LLK MIETA+ T  QGRIVNVSS+I+N
Sbjct: 121  NAGRFALEPAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKTTSLQGRIVNVSSSIYN 180

Query: 1011 WFSGDGLRYLEQINRKKSF-YDPTRAYALSKLANVLHTKELARRLKKMEANVTVNCVHPG 1187
            WFSGD +RYL +I+R K   +DPTRAYALSKLA VLHTKE+A+RLK+MEANVTVNCVHPG
Sbjct: 181  WFSGDMIRYLCEISRNKLCDFDPTRAYALSKLAIVLHTKEVAQRLKQMEANVTVNCVHPG 240

Query: 1188 VVKTRLTREREGFLTDLIFFLTSMLLKTIPQAAATTCYVASHPQLLGVSGKYFADCNEAS 1367
            VV+TRLTREREG  TD+ FFLTS LLKTIPQAAATTCYVA+HP L+ V+GKYF+DCNEAS
Sbjct: 241  VVRTRLTREREGMATDIAFFLTSKLLKTIPQAAATTCYVATHPTLVNVTGKYFSDCNEAS 300

Query: 1368 SSQLGSNLKEASRLWIASEAM 1430
            +S+LGSN  EA+RLW ASE M
Sbjct: 301  TSKLGSNSTEAARLWTASEIM 321


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