BLASTX nr result

ID: Coptis24_contig00015738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015738
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283733.1| PREDICTED: ribokinase [Vitis vinifera]            136   2e-30
emb|CAN73058.1| hypothetical protein VITISV_007599 [Vitis vinifera]   134   8e-30
ref|XP_002317476.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_004156504.1| PREDICTED: LOW QUALITY PROTEIN: ribokinase-l...   126   2e-27
ref|XP_004137244.1| PREDICTED: ribokinase-like [Cucumis sativus]      126   2e-27

>ref|XP_002283733.1| PREDICTED: ribokinase [Vitis vinifera]
          Length = 371

 Score =  136 bits (343), Expect = 2e-30
 Identities = 74/122 (60%), Positives = 86/122 (70%), Gaps = 9/122 (7%)
 Frame = +3

Query: 117 LTKSINLIPQQLKL------NQTKSPFLTFSINPSKXXXXXXXXXXXXX---GSANADIY 269
           L  S+   P QL L      +Q++SPF + S+N SK                GSANADIY
Sbjct: 18  LNGSLRTTPVQLHLIRNPSPSQSRSPFPSLSLNASKAPSPQTQVTGPPLVVVGSANADIY 77

Query: 270 VEIDRLPKEGETISAKTGQTLAGGKGANQATCSGKLSYPTFFIGQVGEDAHGRLIIEALE 449
           VEIDRLPKEGET+SAK GQTLAGGKGANQA C GKLSYPT+F+GQVGEDAHG+LI EAL+
Sbjct: 78  VEIDRLPKEGETVSAKHGQTLAGGKGANQAACGGKLSYPTYFVGQVGEDAHGKLISEALK 137

Query: 450 NG 455
           +G
Sbjct: 138 DG 139


>emb|CAN73058.1| hypothetical protein VITISV_007599 [Vitis vinifera]
          Length = 370

 Score =  134 bits (337), Expect = 8e-30
 Identities = 68/102 (66%), Positives = 79/102 (77%), Gaps = 3/102 (2%)
 Frame = +3

Query: 159 NQTKSPFLTFSINPSKXXXXXXXXXXXXX---GSANADIYVEIDRLPKEGETISAKTGQT 329
           +Q++SPF + S+N SK                GSANADIYVEIDRLPKEGET+SAK GQT
Sbjct: 37  SQSRSPFPSLSLNASKAPSPQTQVTGPPLVVVGSANADIYVEIDRLPKEGETVSAKHGQT 96

Query: 330 LAGGKGANQATCSGKLSYPTFFIGQVGEDAHGRLIIEALENG 455
           LAGGKGANQA C GKLSYPT+F+GQVGEDAHG+LI EAL++G
Sbjct: 97  LAGGKGANQAACGGKLSYPTYFVGQVGEDAHGKLISEALKDG 138


>ref|XP_002317476.1| predicted protein [Populus trichocarpa] gi|222860541|gb|EEE98088.1|
           predicted protein [Populus trichocarpa]
          Length = 376

 Score =  130 bits (326), Expect = 1e-28
 Identities = 70/109 (64%), Positives = 76/109 (69%), Gaps = 5/109 (4%)
 Frame = +3

Query: 144 QQLKLNQTKSPFLTFSINPSKXXXXXXXXXXXXX-----GSANADIYVEIDRLPKEGETI 308
           Q  K +  K  F +FSI  SK                  GSANADIYVEIDRLP EGETI
Sbjct: 36  QNQKPSNKKHHFPSFSIKASKTPQTPLTKYPNTPPLVVVGSANADIYVEIDRLPAEGETI 95

Query: 309 SAKTGQTLAGGKGANQATCSGKLSYPTFFIGQVGEDAHGRLIIEALENG 455
           SAKTGQTLAGGKGANQA C  KLSYPT+F+GQVGEDAHG+LI EAL+NG
Sbjct: 96  SAKTGQTLAGGKGANQAACGAKLSYPTYFVGQVGEDAHGKLITEALKNG 144


>ref|XP_004156504.1| PREDICTED: LOW QUALITY PROTEIN: ribokinase-like [Cucumis sativus]
          Length = 370

 Score =  126 bits (317), Expect = 2e-27
 Identities = 76/145 (52%), Positives = 93/145 (64%), Gaps = 1/145 (0%)
 Frame = +3

Query: 24  PLPKLQIKRNMKSTTL-SPSQQQTMHSISTQYLTKSINLIPQQLKLNQTKSPFLTFSINP 200
           PLP+  +   +KST + SP  Q T    S Q    S   +P+   ++ +KSP     + P
Sbjct: 8   PLPENFLALPIKSTKIPSPRIQFT----SPQNPFNSRPPVPR-FSIDSSKSPTPVIPVEP 62

Query: 201 SKXXXXXXXXXXXXXGSANADIYVEIDRLPKEGETISAKTGQTLAGGKGANQATCSGKLS 380
                          GSANADIYVEIDRLP+EGETISAK+GQTLAGGKGANQA C GKL 
Sbjct: 63  PPLVVV---------GSANADIYVEIDRLPEEGETISAKSGQTLAGGKGANQACCGGKLE 113

Query: 381 YPTFFIGQVGEDAHGRLIIEALENG 455
           YPT+F+GQVG+DAHG+LI  ALE+G
Sbjct: 114 YPTYFVGQVGKDAHGKLITAALEDG 138


>ref|XP_004137244.1| PREDICTED: ribokinase-like [Cucumis sativus]
          Length = 370

 Score =  126 bits (317), Expect = 2e-27
 Identities = 76/145 (52%), Positives = 93/145 (64%), Gaps = 1/145 (0%)
 Frame = +3

Query: 24  PLPKLQIKRNMKSTTL-SPSQQQTMHSISTQYLTKSINLIPQQLKLNQTKSPFLTFSINP 200
           PLP+  +   +KST + SP  Q T    S Q    S   +P+   ++ +KSP     + P
Sbjct: 8   PLPENFLALPIKSTKIPSPRIQFT----SPQNPFNSRPPVPR-FSIDSSKSPTPVIPVEP 62

Query: 201 SKXXXXXXXXXXXXXGSANADIYVEIDRLPKEGETISAKTGQTLAGGKGANQATCSGKLS 380
                          GSANADIYVEIDRLP+EGETISAK+GQTLAGGKGANQA C GKL 
Sbjct: 63  PPLVVV---------GSANADIYVEIDRLPEEGETISAKSGQTLAGGKGANQACCGGKLE 113

Query: 381 YPTFFIGQVGEDAHGRLIIEALENG 455
           YPT+F+GQVG+DAHG+LI  ALE+G
Sbjct: 114 YPTYFVGQVGKDAHGKLITAALEDG 138


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