BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015662
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269045.1| PREDICTED: transcription initiation factor I...   101   7e-20
emb|CAN74371.1| hypothetical protein VITISV_004775 [Vitis vinifera]   101   7e-20
ref|XP_002284342.1| PREDICTED: transcription initiation factor I...   100   2e-19
ref|NP_001238343.1| transcription initiation factor IIB [Glycine...    99   5e-19
ref|XP_003519077.1| PREDICTED: transcription initiation factor I...    99   5e-19

>ref|XP_002269045.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
           gi|296088031|emb|CBI35314.3| unnamed protein product
           [Vitis vinifera]
          Length = 312

 Score =  101 bits (251), Expect = 7e-20
 Identities = 46/54 (85%), Positives = 53/54 (98%)
 Frame = -3

Query: 179 QLSDERKLLKDISLATGVAEGTIRNSYKDLYPYVSRLIPSWYAKEEDLKNLSSP 18
           QLSDE+KLL+DIS+ATGVAEGTIRNSYKDLYP++SR+IPSWYAKEEDL+NL SP
Sbjct: 259 QLSDEKKLLRDISIATGVAEGTIRNSYKDLYPHISRIIPSWYAKEEDLRNLCSP 312


>emb|CAN74371.1| hypothetical protein VITISV_004775 [Vitis vinifera]
          Length = 312

 Score =  101 bits (251), Expect = 7e-20
 Identities = 46/54 (85%), Positives = 53/54 (98%)
 Frame = -3

Query: 179 QLSDERKLLKDISLATGVAEGTIRNSYKDLYPYVSRLIPSWYAKEEDLKNLSSP 18
           QLSDE+KLL+DIS+ATGVAEGTIRNSYKDLYP++SR+IPSWYAKEEDL+NL SP
Sbjct: 259 QLSDEKKLLRDISIATGVAEGTIRNSYKDLYPHISRIIPSWYAKEEDLRNLCSP 312


>ref|XP_002284342.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
           gi|297739630|emb|CBI29812.3| unnamed protein product
           [Vitis vinifera]
          Length = 312

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/54 (83%), Positives = 53/54 (98%)
 Frame = -3

Query: 179 QLSDERKLLKDISLATGVAEGTIRNSYKDLYPYVSRLIPSWYAKEEDLKNLSSP 18
           QLSDE+KLL+DIS+ATGVAEGTIRNSYKDLYP++S++IPSWYAKEEDL+NL SP
Sbjct: 259 QLSDEKKLLRDISIATGVAEGTIRNSYKDLYPHISKIIPSWYAKEEDLRNLCSP 312


>ref|NP_001238343.1| transcription initiation factor IIB [Glycine max]
           gi|1351222|sp|P48513.1|TF2B_SOYBN RecName:
           Full=Transcription initiation factor IIB; AltName:
           Full=General transcription factor TFIIB
           gi|945087|gb|AAB09756.1| transcription factor TFIIB
           [Glycine max]
          Length = 313

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 46/54 (85%), Positives = 52/54 (96%)
 Frame = -3

Query: 179 QLSDERKLLKDISLATGVAEGTIRNSYKDLYPYVSRLIPSWYAKEEDLKNLSSP 18
           QLSD++K LKDISLATGVAEGTIRNSYKDLYP+VS++IP+WYAKEEDLKNL SP
Sbjct: 260 QLSDDKKPLKDISLATGVAEGTIRNSYKDLYPHVSKIIPNWYAKEEDLKNLCSP 313


>ref|XP_003519077.1| PREDICTED: transcription initiation factor IIB-like [Glycine max]
          Length = 314

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 46/54 (85%), Positives = 52/54 (96%)
 Frame = -3

Query: 179 QLSDERKLLKDISLATGVAEGTIRNSYKDLYPYVSRLIPSWYAKEEDLKNLSSP 18
           QLSD++K LKDISLATGVAEGTIRNSYKDLYP+VS++IP+WYAKEEDLKNL SP
Sbjct: 261 QLSDDKKPLKDISLATGVAEGTIRNSYKDLYPHVSKIIPNWYAKEEDLKNLCSP 314