BLASTX nr result

ID: Coptis24_contig00015596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015596
         (691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23350.3| unnamed protein product [Vitis vinifera]              372   e-101
ref|XP_002312205.1| predicted protein [Populus trichocarpa] gi|2...   355   5e-96
gb|AEY85029.1| cohesin subunit [Camellia sinensis]                    354   1e-95
ref|XP_002871712.1| hypothetical protein ARALYDRAFT_909607 [Arab...   348   4e-94
ref|XP_004163522.1| PREDICTED: uncharacterized LOC101223080, par...   348   6e-94

>emb|CBI23350.3| unnamed protein product [Vitis vinifera]
          Length = 1133

 Score =  372 bits (955), Expect = e-101
 Identities = 190/225 (84%), Positives = 205/225 (91%), Gaps = 1/225 (0%)
 Frame = -3

Query: 677 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEVPIALRLSSHLL 498
           MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFP+VPIALRLSSHLL
Sbjct: 1   MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60

Query: 497 LGVVRIYSRKVNYLFHDCSEALLKVKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 318
           LGVVRIYSRKVNYLF DCSEALLK+KQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
Sbjct: 61  LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120

Query: 317 LPDSEHFQGNYVDHHVSTREQITLQDTMDGVVYSTSQFGLDERFGDGDTSQIGLDLDEEL 138
           LPD++ FQGNYVDHHVSTREQITLQDTM+GVVYSTSQFGLDERFGDGDTSQIGLDLDE+L
Sbjct: 121 LPDNDIFQGNYVDHHVSTREQITLQDTMEGVVYSTSQFGLDERFGDGDTSQIGLDLDEDL 180

Query: 137 FLDKVTSPGQTSVLLDSQNVNPQAS-GPMTPFTEMDIDDDQTTVD 6
           FLDKV++PG   VLL   + +PQAS  P+ P  + D+  + T  +
Sbjct: 181 FLDKVSAPGHAGVLL-GLDADPQASVHPIIPL-QKDVISEATAAN 223


>ref|XP_002312205.1| predicted protein [Populus trichocarpa] gi|222852025|gb|EEE89572.1|
           predicted protein [Populus trichocarpa]
          Length = 1208

 Score =  355 bits (911), Expect = 5e-96
 Identities = 176/203 (86%), Positives = 192/203 (94%)
 Frame = -3

Query: 677 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEVPIALRLSSHLL 498
           MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFP+VPIALRLSSHLL
Sbjct: 1   MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60

Query: 497 LGVVRIYSRKVNYLFHDCSEALLKVKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 318
           LGVVRIYSRKV+YLF DCSEALLKVKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
Sbjct: 61  LGVVRIYSRKVSYLFDDCSEALLKVKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120

Query: 317 LPDSEHFQGNYVDHHVSTREQITLQDTMDGVVYSTSQFGLDERFGDGDTSQIGLDLDEEL 138
           LPD++ FQGNYVDHH+STREQITLQDTMDGVVYSTSQFGLDERFGDGDTS + LDL+E+L
Sbjct: 121 LPDNDIFQGNYVDHHISTREQITLQDTMDGVVYSTSQFGLDERFGDGDTSHVDLDLEEDL 180

Query: 137 FLDKVTSPGQTSVLLDSQNVNPQ 69
           FLDKV +P + S+   ++++ P+
Sbjct: 181 FLDKVAAP-RLSLQTSAESLEPK 202


>gb|AEY85029.1| cohesin subunit [Camellia sinensis]
          Length = 1336

 Score =  354 bits (908), Expect = 1e-95
 Identities = 181/218 (83%), Positives = 193/218 (88%)
 Frame = -3

Query: 677 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEVPIALRLSSHLL 498
           MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEVPIALRLSSHLL
Sbjct: 1   MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEVPIALRLSSHLL 60

Query: 497 LGVVRIYSRKVNYLFHDCSEALLKVKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 318
           LGVVRIYSRKVNYLF DCSEALLK+KQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
Sbjct: 61  LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120

Query: 317 LPDSEHFQGNYVDHHVSTREQITLQDTMDGVVYSTSQFGLDERFGDGDTSQIGLDLDEEL 138
           LPDS+ FQGN+VDHHVSTREQITLQDTM+ VVYST+QFGLDERFGDG+TS  GLDLDEEL
Sbjct: 121 LPDSDMFQGNFVDHHVSTREQITLQDTMESVVYSTTQFGLDERFGDGETS--GLDLDEEL 178

Query: 137 FLDKVTSPGQTSVLLDSQNVNPQASGPMTPFTEMDIDD 24
           F +KV + G   V+LDS    P +  PM    +   D+
Sbjct: 179 FSNKVIATGHAGVMLDS-GAEPASVQPMVHLEQDKTDE 215


>ref|XP_002871712.1| hypothetical protein ARALYDRAFT_909607 [Arabidopsis lyrata subsp.
           lyrata] gi|297317549|gb|EFH47971.1| hypothetical protein
           ARALYDRAFT_909607 [Arabidopsis lyrata subsp. lyrata]
          Length = 1030

 Score =  348 bits (894), Expect = 4e-94
 Identities = 180/208 (86%), Positives = 184/208 (88%), Gaps = 1/208 (0%)
 Frame = -3

Query: 677 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEVPIALRLSSHLL 498
           MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPE PIALRLSSHLL
Sbjct: 1   MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEAPIALRLSSHLL 60

Query: 497 LGVVRIYSRKVNYLFHDCSEALLKVKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 318
           LGVVRIYSRKVNYLF DCSEALLKVKQAFRS AVDLPPEESTAPYHSITLPETFDLDDFE
Sbjct: 61  LGVVRIYSRKVNYLFDDCSEALLKVKQAFRSAAVDLPPEESTAPYHSITLPETFDLDDFE 120

Query: 317 LPDSEHFQGNYVDHHVSTREQITLQDTMDGVVYSTSQFGLDERFGDGDTSQIGLDLDEEL 138
           LPD+E FQGNYVDHHVSTREQITLQDTMDGVVYSTSQFGLDERFGDGDTSQ  LDLDE +
Sbjct: 121 LPDNEIFQGNYVDHHVSTREQITLQDTMDGVVYSTSQFGLDERFGDGDTSQAALDLDEAV 180

Query: 137 FLDK-VTSPGQTSVLLDSQNVNPQASGP 57
           F DK V       V  +  NV   A+ P
Sbjct: 181 FQDKDVIGSDDEGVPGNDHNVYLDAATP 208


>ref|XP_004163522.1| PREDICTED: uncharacterized LOC101223080, partial [Cucumis sativus]
          Length = 892

 Score =  348 bits (893), Expect = 6e-94
 Identities = 179/226 (79%), Positives = 197/226 (87%), Gaps = 1/226 (0%)
 Frame = -3

Query: 677 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEVPIALRLSSHLL 498
           MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFP+VPIALRLSSHLL
Sbjct: 1   MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60

Query: 497 LGVVRIYSRKVNYLFHDCSEALLKVKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 318
           LGVVRIYSRKVNYLF DCSEALLK+KQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
Sbjct: 61  LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120

Query: 317 LPDSEHFQGNYVDHHVSTREQITLQDTMDGVVYSTSQFGLDERFGDGDTSQIGLDL-DEE 141
           LPD+E +QGNYVDHHVS+REQITLQDTM+GVVY+TSQFGLDERFGDGD SQIGLDL +EE
Sbjct: 121 LPDNEIYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLEEEE 180

Query: 140 LFLDKVTSPGQTSVLLDSQNVNPQASGPMTPFTEMDIDDDQTTVDE 3
           LF++K+T       + D  N++   + P TP     + D    ++E
Sbjct: 181 LFVEKIT-------VKDHDNISD--NDPPTPSQSTFLKDKDGDMEE 217


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