BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015595
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263938.1| PREDICTED: 40S ribosomal protein S29-like [V...    49   7e-08
ref|XP_003633092.1| PREDICTED: 40S ribosomal protein S29-like is...    49   1e-07
ref|XP_002271801.1| PREDICTED: 40S ribosomal protein S29-like [V...    49   1e-07
ref|XP_002313170.1| predicted protein [Populus trichocarpa] gi|2...    49   2e-07
ref|XP_002298768.1| predicted protein [Populus trichocarpa] gi|2...    49   2e-07

>ref|XP_002263938.1| PREDICTED: 40S ribosomal protein S29-like [Vitis vinifera]
          Length = 56

 Score = 49.3 bits (116), Expect(2) = 7e-08
 Identities = 19/21 (90%), Positives = 20/21 (95%)
 Frame = +1

Query: 166 MGHSNVWNSHPKTYGPGSCTC 228
           MGHSNVWNSHPK+YGPGS TC
Sbjct: 1   MGHSNVWNSHPKSYGPGSRTC 21



 Score = 33.1 bits (74), Expect(2) = 7e-08
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +3

Query: 249 VCGNPHGLICKYGLV 293
           VCGNPHGLI KYGL+
Sbjct: 23  VCGNPHGLIRKYGLM 37


>ref|XP_003633092.1| PREDICTED: 40S ribosomal protein S29-like isoform 2 [Vitis
           vinifera] gi|297738544|emb|CBI27789.3| unnamed protein
           product [Vitis vinifera]
          Length = 73

 Score = 48.9 bits (115), Expect(2) = 1e-07
 Identities = 19/21 (90%), Positives = 19/21 (90%)
 Frame = +1

Query: 166 MGHSNVWNSHPKTYGPGSCTC 228
           MGHSNVWNSHPK YGPGS TC
Sbjct: 1   MGHSNVWNSHPKNYGPGSRTC 21



 Score = 33.1 bits (74), Expect(2) = 1e-07
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +3

Query: 249 VCGNPHGLICKYGLV 293
           VCGNPHGLI KYGL+
Sbjct: 23  VCGNPHGLIRKYGLM 37


>ref|XP_002271801.1| PREDICTED: 40S ribosomal protein S29-like [Vitis vinifera]
           gi|225444692|ref|XP_002277856.1| PREDICTED: 40S
           ribosomal protein S29-like isoform 1 [Vitis vinifera]
           gi|255538096|ref|XP_002510113.1| 40S ribosomal protein
           S29, putative [Ricinus communis]
           gi|356497504|ref|XP_003517600.1| PREDICTED: 40S
           ribosomal protein S29-like [Glycine max]
           gi|356536119|ref|XP_003536587.1| PREDICTED: 40S
           ribosomal protein S29 [Glycine max]
           gi|356538933|ref|XP_003537955.1| PREDICTED: 40S
           ribosomal protein S29-like isoform 1 [Glycine max]
           gi|356575720|ref|XP_003555985.1| PREDICTED: 40S
           ribosomal protein S29-like [Glycine max]
           gi|449438331|ref|XP_004136942.1| PREDICTED: 40S
           ribosomal protein S29-like [Cucumis sativus]
           gi|449447053|ref|XP_004141284.1| PREDICTED: 40S
           ribosomal protein S29-like [Cucumis sativus]
           gi|449469128|ref|XP_004152273.1| PREDICTED: 40S
           ribosomal protein S29-like [Cucumis sativus]
           gi|449484349|ref|XP_004156858.1| PREDICTED: 40S
           ribosomal protein S29-like [Cucumis sativus]
           gi|449508184|ref|XP_004163243.1| PREDICTED: 40S
           ribosomal protein S29-like [Cucumis sativus]
           gi|449520128|ref|XP_004167086.1| PREDICTED: 40S
           ribosomal protein S29-like [Cucumis sativus]
           gi|223550814|gb|EEF52300.1| 40S ribosomal protein S29,
           putative [Ricinus communis]
          Length = 56

 Score = 48.9 bits (115), Expect(2) = 1e-07
 Identities = 19/21 (90%), Positives = 19/21 (90%)
 Frame = +1

Query: 166 MGHSNVWNSHPKTYGPGSCTC 228
           MGHSNVWNSHPK YGPGS TC
Sbjct: 1   MGHSNVWNSHPKNYGPGSRTC 21



 Score = 33.1 bits (74), Expect(2) = 1e-07
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +3

Query: 249 VCGNPHGLICKYGLV 293
           VCGNPHGLI KYGL+
Sbjct: 23  VCGNPHGLIRKYGLM 37


>ref|XP_002313170.1| predicted protein [Populus trichocarpa] gi|222849578|gb|EEE87125.1|
           predicted protein [Populus trichocarpa]
          Length = 54

 Score = 48.9 bits (115), Expect(2) = 2e-07
 Identities = 19/21 (90%), Positives = 19/21 (90%)
 Frame = +1

Query: 166 MGHSNVWNSHPKTYGPGSCTC 228
           MGHSNVWNSHPK YGPGS TC
Sbjct: 1   MGHSNVWNSHPKNYGPGSRTC 21



 Score = 32.3 bits (72), Expect(2) = 2e-07
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +3

Query: 249 VCGNPHGLICKYGLV 293
           VCGNPHG+I KYGL+
Sbjct: 23  VCGNPHGIIRKYGLM 37


>ref|XP_002298768.1| predicted protein [Populus trichocarpa] gi|222846026|gb|EEE83573.1|
           predicted protein [Populus trichocarpa]
          Length = 56

 Score = 48.9 bits (115), Expect(2) = 2e-07
 Identities = 19/21 (90%), Positives = 19/21 (90%)
 Frame = +1

Query: 166 MGHSNVWNSHPKTYGPGSCTC 228
           MGHSNVWNSHPK YGPGS TC
Sbjct: 1   MGHSNVWNSHPKNYGPGSRTC 21



 Score = 32.3 bits (72), Expect(2) = 2e-07
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +3

Query: 249 VCGNPHGLICKYGLV 293
           VCGNPHG+I KYGL+
Sbjct: 23  VCGNPHGIIRKYGLM 37