BLASTX nr result

ID: Coptis24_contig00015554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015554
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]    55   8e-06

>emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]
          Length = 439

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 35/74 (47%), Positives = 42/74 (56%)
 Frame = -1

Query: 266 EALKTSYLAALLSRPRQEQTSLEHIIKAMREKEYEFKSSYGHHKEKIKLLTSDECVTMMI 87
           E  K  YL ALL R  +  T +E  +KAMRE E   +  Y     +I    SDE VTMM+
Sbjct: 80  EGHKWQYLKALLQR--KPGTMVERYVKAMRELEARTRGCYA----EIIKFDSDEFVTMML 133

Query: 86  LDGCFILELIYKFK 45
           LDGCFI+EL  K K
Sbjct: 134 LDGCFIIELFLKNK 147


Top